Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625011

Identifier: 167625011

GI number: 167625011

Start: 3781038

End: 3781880

Strand: Reverse

Name: 167625011

Synonym: Shal_3099

Alternate gene names: NA

Gene position: 3781880-3781038 (Counterclockwise)

Preceding gene: 167625013

Following gene: 167625010

Centisome position: 72.35

GC content: 45.08

Gene sequence:

>843_bases
ATGTCTACGGAACATCGAGTATTAGTTGGTTTATTAAAAAAATTAAAGTCAGATTCCTTGGTCTTGCCGACTTTGCCTGA
AGTGGCCATGCGAGTACAAGAAGTGGTCGGCCAAGAAGATACTAGTTTAAAAGATGTCGCCAGTATTATTGGTCAAGACG
CGGCAATTTCAGCTCGGGTTATTCGCATTGCAAATAGTGCCATGTATAGCCGTGGGATCCCTGCGGAAAACGTTAATGCA
GCAATTAATCGTATTGGGCTCATGCAGATAAAATCGATTGTAACGTCGATTGCTATGGAGCAACTCTTTATCTCGACCAA
CCAGATGGTCTGGCAAGTGATGGATGAAGTATGGAGCTCATCCATTGATGTAACTGCTGCCGCGTGTGCGATGCTGCAAA
TTTACAATGCGAATCATCCTAGTAGCAAACTTAACTTCGACACTATGACATTAGCGGGTCTAGTACATAACATTGGCGCC
TTGCCTGTACTGACTGAAGCAGAGGCGCAGCCAGAGCTGTTTGACAGCATCGAAATGTTGCGGGCTTTAGTGAAAAAGCT
GCAGGGGCCATTAGGGCGAGCTGTACTTAAGAGTTGGGAGTTCTCACCTGATGTGATGCAGGTGGTTGAGCGTTGGTCGG
ATCTTACCTATAACGCTGAACAAGTTAGTTATTTAGACTTTATTCGCGCAGCAGCATTCTATACGGGAGAGCTTAGAGCG
GGTAATGATTTGGAGCAAAGGATGACAGCCTTTATCGAGCGTGGTTTACCAGTATCGGTTGATGAGTTAGCGGGTGATAT
ATTCCAAGAAGCCTATCAATCTATCAAGGCGAGTTACGAATAA

Upstream 100 bases:

>100_bases
TTAACTATTGCACCAGTAAGATGATTTTGATCGGAACTCTCAGGTTTGAGCTGATATACTCAATTCGCTGCAAATTAATA
CGATTTAAAAGGGAGTTGGG

Downstream 100 bases:

>100_bases
CCTTGATGTTTAAATAGTGATGCTATGAAAACTTAAACGATAGTGTGTGCTGGCATAGGGGCTAGCAGGCACTATAGTTT
ATAACAAAAGAAATTGAGAT

Product: putative signal transduction protein

Products: NA

Alternate protein names: Metal Dependent Phosphohydrolase; Sensor Histidine Kinase; Cytoplasmic Protein; Metal-Dependent Phosphohydrolase; Histidine Kinase; Metal-Dependent Hydrolase HDOD; HDIG Domain-Containing Protein; Metal-Dependent Phosphoesterase; HDOD Domain Family; Hdod Domain Family Protein

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSTEHRVLVGLLKKLKSDSLVLPTLPEVAMRVQEVVGQEDTSLKDVASIIGQDAAISARVIRIANSAMYSRGIPAENVNA
AINRIGLMQIKSIVTSIAMEQLFISTNQMVWQVMDEVWSSSIDVTAAACAMLQIYNANHPSSKLNFDTMTLAGLVHNIGA
LPVLTEAEAQPELFDSIEMLRALVKKLQGPLGRAVLKSWEFSPDVMQVVERWSDLTYNAEQVSYLDFIRAAAFYTGELRA
GNDLEQRMTAFIERGLPVSVDELAGDIFQEAYQSIKASYE

Sequences:

>Translated_280_residues
MSTEHRVLVGLLKKLKSDSLVLPTLPEVAMRVQEVVGQEDTSLKDVASIIGQDAAISARVIRIANSAMYSRGIPAENVNA
AINRIGLMQIKSIVTSIAMEQLFISTNQMVWQVMDEVWSSSIDVTAAACAMLQIYNANHPSSKLNFDTMTLAGLVHNIGA
LPVLTEAEAQPELFDSIEMLRALVKKLQGPLGRAVLKSWEFSPDVMQVVERWSDLTYNAEQVSYLDFIRAAAFYTGELRA
GNDLEQRMTAFIERGLPVSVDELAGDIFQEAYQSIKASYE
>Mature_279_residues
STEHRVLVGLLKKLKSDSLVLPTLPEVAMRVQEVVGQEDTSLKDVASIIGQDAAISARVIRIANSAMYSRGIPAENVNAA
INRIGLMQIKSIVTSIAMEQLFISTNQMVWQVMDEVWSSSIDVTAAACAMLQIYNANHPSSKLNFDTMTLAGLVHNIGAL
PVLTEAEAQPELFDSIEMLRALVKKLQGPLGRAVLKSWEFSPDVMQVVERWSDLTYNAEQVSYLDFIRAAAFYTGELRAG
NDLEQRMTAFIERGLPVSVDELAGDIFQEAYQSIKASYE

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30887; Mature: 30756

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEHRVLVGLLKKLKSDSLVLPTLPEVAMRVQEVVGQEDTSLKDVASIIGQDAAISARV
CCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
IRIANSAMYSRGIPAENVNAAINRIGLMQIKSIVTSIAMEQLFISTNQMVWQVMDEVWSS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SIDVTAAACAMLQIYNANHPSSKLNFDTMTLAGLVHNIGALPVLTEAEAQPELFDSIEML
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH
RALVKKLQGPLGRAVLKSWEFSPDVMQVVERWSDLTYNAEQVSYLDFIRAAAFYTGELRA
HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
GNDLEQRMTAFIERGLPVSVDELAGDIFQEAYQSIKASYE
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STEHRVLVGLLKKLKSDSLVLPTLPEVAMRVQEVVGQEDTSLKDVASIIGQDAAISARV
CCCHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
IRIANSAMYSRGIPAENVNAAINRIGLMQIKSIVTSIAMEQLFISTNQMVWQVMDEVWSS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SIDVTAAACAMLQIYNANHPSSKLNFDTMTLAGLVHNIGALPVLTEAEAQPELFDSIEML
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH
RALVKKLQGPLGRAVLKSWEFSPDVMQVVERWSDLTYNAEQVSYLDFIRAAAFYTGELRA
HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
GNDLEQRMTAFIERGLPVSVDELAGDIFQEAYQSIKASYE
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA