Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167624212

Identifier: 167624212

GI number: 167624212

Start: 2771079

End: 2773133

Strand: Direct

Name: 167624212

Synonym: Shal_2288

Alternate gene names: NA

Gene position: 2771079-2773133 (Clockwise)

Preceding gene: 167624195

Following gene: 167624213

Centisome position: 53.02

GC content: 41.02

Gene sequence:

>2055_bases
ATGAGCGATGACTATGGTTTTGACGAATCCAGAACACAGTTATTAAGGGTGTTCTTTAGAACGCTTGCTATTTTAATATT
GTTTACCGTCATTCTGTTTAACTTTAAATCCTCGCTTCAAACCTACTCCGTAATGTCTTTAGCCTCCACAATGAATAGTT
TAGATAGCCAGTCCCTATCTGCATACGGGTTGATCTACGACGTTATATTTTTTTTCTGTATTCTAATCGCTATACACATC
ATCTGGGCTGCAGTAATAACCGTTTCAACCCGCTGCCCTTGGTTACCTATAGAGGGAAAAAAACAGCAAGATCTATACTG
GATGCTATTTGTTGGTCTCCACATTACCTGTTTGATTGCAATTAACTCCTATTTTTACCCTACCTCATTAGTTTCGTACT
TTAGGCATACGCCTGTCAGCGAACCTCTTATATGGGGAGGGTTGGCACTGTTTTTAATTATCAGTTTCTATCGAGGCTTA
GCCACTTTCACCTCAAAGCAAGTTGTTTTTTCCATCTCTCTGTTATTTACGGTAGGACTCTTCATCCCCTTTCTCTCAAT
CAATCAGACAAATGTACAGCCTCAAAAAGATCCAAATATTATTATTTTAGGCATCGACGGTCTTAGGCCAGACCATTTGA
AGTACATGGGAGCAGCACCTCAAGTTGCCCCTAACTTGAATCGCTTACTCGATAACATGACGATATACAAAAATGCTTAT
ACCCCACAGGGACGAACTTACGTTGCGTGGATGAGTCTTCTTACCGGTAAGTATCCGATTAATAATGGCGTTAGATTTAA
TTTAGCCCCACCAGAAATGGTAAATAAAACACTTCCTATAATTGAACTATTAAAGGAGAGAGGCTACCACACGACCTATG
CTATTGATGAGCGTCGCTTTAACCAAATTGATTCTAGCTATGGTTTTGATAATACAGTAGGACCCAAGGCTGGTGCCGCA
GATGCTCTCATATCGGGGTTAGGCGATCTCCCCTATCTAAATATTCTACTCATGCACCCCTACTCCTCCTATATACTGCC
TTACCTATACAACAATAGGGCCTATGGTAAAGCCTACTCGCCTATTGCATTTAATAAGGCTGTCATCGAGAGCCTTGATT
ATGAAAACCCCAACTTTCTTGCCGTACACTATTGTCAATTGCATTGGCCATATACCTCTAAAGATTTTATATCGGAGCCT
CTAGAAAATTGGGACGGAAATTACAATCACTATATGTATAAGGAGATGTTAAAAAGCGTTGATAAACAAGTTGCTGATCT
CTTTACTCGCTTAAAACAGAAAGGAATGCTAGACGATGCGATAGTCTATATTATTTCCGATCATGGTGAGAGCTTTAAAC
TGCCCAGTTTCGAGACGCCCACGCCACAAGGTCCCAAGGTATTCCCTAAGACAAAGTCTTGGGGTCATGGCACAAATATC
TTGGACCAGCAGCAATCCCTTATTCTTCTGGCTCGGGCTGAATTCAATAATTCGACTATCACCTCTCCCGCACAAAAAAT
CGAAGGGCTTTATTCACTGGTAGACATCGTCCCTACGTTAGTGAGTACGTTAAACATTTCAACAGCATCTGTTTCGAGGT
TTAAAGGTGCCGATTCCGACGGGATAACGCTCCCTTGGACAGCAGAACAAGTATCGCCTAAGCGATATGTTTTTGTTGAG
TCTTCAGTCCCGGTAAAGTCCATTAATAAGAGCTTTATTGATAAGAAAGAGGTCATGTCAGAGACCGCTTCAAATTATGA
AGTTAGAAGTGATGGTAAAGCCTACATGCGCACTGAAAACTACATAGAGCTGATAGCCAAAAAACAGCGGGCAATCTACT
ACCAACAGTGGCAGCTAAGCTTACTACCCGATTACAACTCTCCCGTGCTTTTAAACACAGAAACAAATGAAATTTATGAC
GCTGATAACTACCAAGGTGATTTTAATTGGCGACCAATGATGAGAGAGCTTTGCTCTCAATACAAAGAGGATCCAGGATT
TGATCAACACGCAGTTTGTACCGAAGTCAATATTAGTCGTAACTCACTCAATTAA

Upstream 100 bases:

>100_bases
TTGGGGGCTGGCCGGCATCAAAAGAGCATAACTTCGTATCATCAGATATTGATTACCCCATAAGAGCGAGCAGTAACAAC
GCTTCACAGAAGGAGCGAAA

Downstream 100 bases:

>100_bases
TGTCCAACAGTTGAGCGGCAATTACTTCATTTTTCAGGGAACAAGACAGGTACGTTAGCTGTAGCTAGCTGTTTTATAAA
AATATGTACTACAGTTATCT

Product: sulfatase

Products: NA

Alternate protein names: Sulfatase Domain Protein; Sulfatase Domain-Containing Protein; Arylsulfatase

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MSDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLSAYGLIYDVIFFFCILIAIHI
IWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIAINSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGL
ATFTSKQVVFSISLLFTVGLFIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY
TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRFNQIDSSYGFDNTVGPKAGAA
DALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYSPIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEP
LENWDGNYNHYMYKEMLKSVDKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI
LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSDGITLPWTAEQVSPKRYVFVE
SSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTENYIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYD
ADNYQGDFNWRPMMRELCSQYKEDPGFDQHAVCTEVNISRNSLN

Sequences:

>Translated_684_residues
MSDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLSAYGLIYDVIFFFCILIAIHI
IWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIAINSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGL
ATFTSKQVVFSISLLFTVGLFIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY
TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRFNQIDSSYGFDNTVGPKAGAA
DALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYSPIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEP
LENWDGNYNHYMYKEMLKSVDKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI
LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSDGITLPWTAEQVSPKRYVFVE
SSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTENYIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYD
ADNYQGDFNWRPMMRELCSQYKEDPGFDQHAVCTEVNISRNSLN
>Mature_683_residues
SDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLSAYGLIYDVIFFFCILIAIHII
WAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIAINSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGLA
TFTSKQVVFSISLLFTVGLFIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAYT
PQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRFNQIDSSYGFDNTVGPKAGAAD
ALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYSPIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEPL
ENWDGNYNHYMYKEMLKSVDKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNIL
DQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSDGITLPWTAEQVSPKRYVFVES
SVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTENYIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYDA
DNYQGDFNWRPMMRELCSQYKEDPGFDQHAVCTEVNISRNSLN

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77915; Mature: 77784

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGLIYDVIFFFCILIAIHIIWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
INSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGLATFTSKQVVFSISLLFTVGL
HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY
HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHCCEEEECCC
TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRF
CCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHCCCCEEEEECHHHH
NQIDSSYGFDNTVGPKAGAADALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYS
HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHEECCCCCCCCCC
PIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEPLENWDGNYNHYMYKEMLKSV
CCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
DKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSD
HHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GITLPWTAEQVSPKRYVFVESSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTEN
CEECCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH
YIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYDADNYQGDFNWRPMMRELCSQ
HHHHHHHHHHHHEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
YKEDPGFDQHAVCTEVNISRNSLN
HCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SDDYGFDESRTQLLRVFFRTLAILILFTVILFNFKSSLQTYSVMSLASTMNSLDSQSLS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGLIYDVIFFFCILIAIHIIWAAVITVSTRCPWLPIEGKKQQDLYWMLFVGLHITCLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
INSYFYPTSLVSYFRHTPVSEPLIWGGLALFLIISFYRGLATFTSKQVVFSISLLFTVGL
HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FIPFLSINQTNVQPQKDPNIIILGIDGLRPDHLKYMGAAPQVAPNLNRLLDNMTIYKNAY
HHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHCCEEEECCC
TPQGRTYVAWMSLLTGKYPINNGVRFNLAPPEMVNKTLPIIELLKERGYHTTYAIDERRF
CCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCHHHHHHHHHCCCCEEEEECHHHH
NQIDSSYGFDNTVGPKAGAADALISGLGDLPYLNILLMHPYSSYILPYLYNNRAYGKAYS
HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHEECCCCCCCCCC
PIAFNKAVIESLDYENPNFLAVHYCQLHWPYTSKDFISEPLENWDGNYNHYMYKEMLKSV
CCHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
DKQVADLFTRLKQKGMLDDAIVYIISDHGESFKLPSFETPTPQGPKVFPKTKSWGHGTNI
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LDQQQSLILLARAEFNNSTITSPAQKIEGLYSLVDIVPTLVSTLNISTASVSRFKGADSD
HHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
GITLPWTAEQVSPKRYVFVESSVPVKSINKSFIDKKEVMSETASNYEVRSDGKAYMRTEN
CEECCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHH
YIELIAKKQRAIYYQQWQLSLLPDYNSPVLLNTETNEIYDADNYQGDFNWRPMMRELCSQ
HHHHHHHHHHHHEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
YKEDPGFDQHAVCTEVNISRNSLN
HCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA