Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is fliK [C]

Identifier: 167623384

GI number: 167623384

Start: 1751674

End: 1753185

Strand: Direct

Name: fliK [C]

Synonym: Shal_1453

Alternate gene names: 167623384

Gene position: 1751674-1753185 (Clockwise)

Preceding gene: 167623383

Following gene: 167623385

Centisome position: 33.51

GC content: 48.21

Gene sequence:

>1512_bases
ATGCAGCAGATGAACAATATTTTACTCAGTAGCCCTGAGCCAAGCAAGAAGGCGACTGAAAACCACAGCAAGTCTGTAGA
ATCCTCTTTGGAGCCATCTCAGAAACCCAAGACAAACTCCGAAGGTGATAGCTTTTCGGCTGCGCTGGAAAAAGTGGGTA
AGCAGACACAGGACAGAGCAAATACACAATCAGCTGCAAAAAAAGCCCTTGCTGGAGATGAAAATCTAGCAGAAAGCACA
ATTAAGGCGGAAACAAAGGATGAGAGTGCGACTGACGATGTAAGCCAAGTGTTTGCACAGATCAATCTTGCTAATAACTT
TGGTAGTGAGGCTCAGCTTGCCGCTAACGGCGAAAGCTTGCCGTTAGCAACAGAACCGCTGGAGCCTGGCAAACTCGGTG
ATGATTTAACTGCTAGCGAATTACCCGATGAAATCTTAATGGCGCTGAGTCAACAGTCTGGCATGTCAGAGCAAGAACTG
AGTAAGCTTTCAGCGGCGGAGTTAAAAAACCTATTACAGCAAAGCCAAATCCTCGATGCTAATGGCGAATTAAAAGCTGA
GTTTGCTGCTATGGCTAATGGTAACCTCGGCTTAGGCGATAATCAGCAGTCAAAAGAGCAAGGCGCTGCGCTAGCTGGGC
AGGCTGGAGTGACAGATAAAGCGGCTCAGGCCAATATTGCAATGGATCCTAAAGTACTACAATCTGAACTAAAGGGCGCT
GACGCTAAAAATACAAACGAGACTCGAGATATTTTCGGTAAAGAGCTCGCTGGGCTCACTCAGTCGCAATCTCAGAGCAC
CAGTGCTGAACAGCTAAAAGCGGCTAAAAATGCTGAAGGGACAAGTCAAACTATAGCAAATCAGCTTACTGCGACCGAGC
AGCTTAAAACGGCTGAACTGTCGGTGCGAATGATGTCGTCGCAAACGGGGCAAGAGGCAAACTTAGCCGGCGTAAACACT
GACGCTGCGCAAGATCTTAAAGCGGTTATAGGGCTACAAAGTCAAGCATTACAGCTGCAGTCGGGAGCTAATCGTCAAGA
GCTACCACAGTTCCAGTTCGCGTTGAAACAAGCGGGTGAGCAAACGCCGCCAATGCAGCAGATGATCCAGCGTTTCTCTC
CCATGATGAATCAGCAGCTTATCACCATGGTTAGTAATGGGGTGCAGCATGCTGAAATTCGCTTAGACCCACCAGAACTC
GGCCATATGATGGTGCGAATTCAAGTCCAAGGCGATACCACTCAAGTTCAATTTCAAGTGAGTCAACATCAAACTCGTGA
TCTCGTCGAGCAAGCAATGCCAAGGTTACGTGAAATGCTGGCAGAGCAAGGCATGCAGCTAACCGATGGCCAAGTGTCCC
AAGGTAGCGGTGGAAATAGCGACGGTGAGCAGGGGAGTGGTCGCGGAAATGACAACGGCATGGCCGAAACGGATGAAATT
TCGGCAGAAGAGTTGCTCGCAAGGTCAAATCTATCAACAAGTTCGGCTTCAGGTATAGATTATTACGCATAA

Upstream 100 bases:

>100_bases
CATTATTATTGCTTTATATTGTATTCACAGCTTAGGTTAAGCCGATATTTTGACATATTTCGTGTAGGTTGGTTTGTGAG
TTAACGCTGATGGAGACGCA

Downstream 100 bases:

>100_bases
GCAGGTAATCTATAGCAGTTTAAGAATATTGAAATTAATCAGTACTCGAGCAAGGGAATGAAAAATGGCGGAAGAAGCAG
CGTTAGAGCTAGAAGATAGT

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: Flagellar Hook-Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein FliK; Flagellar Protein; Flagellar Hook-Length Control Protein-Like Protein; Flagellar Hook Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MQQMNNILLSSPEPSKKATENHSKSVESSLEPSQKPKTNSEGDSFSAALEKVGKQTQDRANTQSAAKKALAGDENLAEST
IKAETKDESATDDVSQVFAQINLANNFGSEAQLAANGESLPLATEPLEPGKLGDDLTASELPDEILMALSQQSGMSEQEL
SKLSAAELKNLLQQSQILDANGELKAEFAAMANGNLGLGDNQQSKEQGAALAGQAGVTDKAAQANIAMDPKVLQSELKGA
DAKNTNETRDIFGKELAGLTQSQSQSTSAEQLKAAKNAEGTSQTIANQLTATEQLKTAELSVRMMSSQTGQEANLAGVNT
DAAQDLKAVIGLQSQALQLQSGANRQELPQFQFALKQAGEQTPPMQQMIQRFSPMMNQQLITMVSNGVQHAEIRLDPPEL
GHMMVRIQVQGDTTQVQFQVSQHQTRDLVEQAMPRLREMLAEQGMQLTDGQVSQGSGGNSDGEQGSGRGNDNGMAETDEI
SAEELLARSNLSTSSASGIDYYA

Sequences:

>Translated_503_residues
MQQMNNILLSSPEPSKKATENHSKSVESSLEPSQKPKTNSEGDSFSAALEKVGKQTQDRANTQSAAKKALAGDENLAEST
IKAETKDESATDDVSQVFAQINLANNFGSEAQLAANGESLPLATEPLEPGKLGDDLTASELPDEILMALSQQSGMSEQEL
SKLSAAELKNLLQQSQILDANGELKAEFAAMANGNLGLGDNQQSKEQGAALAGQAGVTDKAAQANIAMDPKVLQSELKGA
DAKNTNETRDIFGKELAGLTQSQSQSTSAEQLKAAKNAEGTSQTIANQLTATEQLKTAELSVRMMSSQTGQEANLAGVNT
DAAQDLKAVIGLQSQALQLQSGANRQELPQFQFALKQAGEQTPPMQQMIQRFSPMMNQQLITMVSNGVQHAEIRLDPPEL
GHMMVRIQVQGDTTQVQFQVSQHQTRDLVEQAMPRLREMLAEQGMQLTDGQVSQGSGGNSDGEQGSGRGNDNGMAETDEI
SAEELLARSNLSTSSASGIDYYA
>Mature_503_residues
MQQMNNILLSSPEPSKKATENHSKSVESSLEPSQKPKTNSEGDSFSAALEKVGKQTQDRANTQSAAKKALAGDENLAEST
IKAETKDESATDDVSQVFAQINLANNFGSEAQLAANGESLPLATEPLEPGKLGDDLTASELPDEILMALSQQSGMSEQEL
SKLSAAELKNLLQQSQILDANGELKAEFAAMANGNLGLGDNQQSKEQGAALAGQAGVTDKAAQANIAMDPKVLQSELKGA
DAKNTNETRDIFGKELAGLTQSQSQSTSAEQLKAAKNAEGTSQTIANQLTATEQLKTAELSVRMMSSQTGQEANLAGVNT
DAAQDLKAVIGLQSQALQLQSGANRQELPQFQFALKQAGEQTPPMQQMIQRFSPMMNQQLITMVSNGVQHAEIRLDPPEL
GHMMVRIQVQGDTTQVQFQVSQHQTRDLVEQAMPRLREMLAEQGMQLTDGQVSQGSGGNSDGEQGSGRGNDNGMAETDEI
SAEELLARSNLSTSSASGIDYYA

Specific function: Controls The Length Of The Flagellar Hook. [C]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53497; Mature: 53497

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQMNNILLSSPEPSKKATENHSKSVESSLEPSQKPKTNSEGDSFSAALEKVGKQTQDRA
CCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NTQSAAKKALAGDENLAESTIKAETKDESATDDVSQVFAQINLANNFGSEAQLAANGESL
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
PLATEPLEPGKLGDDLTASELPDEILMALSQQSGMSEQELSKLSAAELKNLLQQSQILDA
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NGELKAEFAAMANGNLGLGDNQQSKEQGAALAGQAGVTDKAAQANIAMDPKVLQSELKGA
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCHHCCCCCCCCHHHHCCCCCCHHHHHHHHCCC
DAKNTNETRDIFGKELAGLTQSQSQSTSAEQLKAAKNAEGTSQTIANQLTATEQLKTAEL
CCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVRMMSSQTGQEANLAGVNTDAAQDLKAVIGLQSQALQLQSGANRQELPQFQFALKQAGE
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
QTPPMQQMIQRFSPMMNQQLITMVSNGVQHAEIRLDPPELGHMMVRIQVQGDTTQVQFQV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCEEEEEEECCCCEEEEEEH
SQHQTRDLVEQAMPRLREMLAEQGMQLTDGQVSQGSGGNSDGEQGSGRGNDNGMAETDEI
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
SAEELLARSNLSTSSASGIDYYA
CHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQMNNILLSSPEPSKKATENHSKSVESSLEPSQKPKTNSEGDSFSAALEKVGKQTQDRA
CCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NTQSAAKKALAGDENLAESTIKAETKDESATDDVSQVFAQINLANNFGSEAQLAANGESL
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
PLATEPLEPGKLGDDLTASELPDEILMALSQQSGMSEQELSKLSAAELKNLLQQSQILDA
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NGELKAEFAAMANGNLGLGDNQQSKEQGAALAGQAGVTDKAAQANIAMDPKVLQSELKGA
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCHHCCCCCCCCHHHHCCCCCCHHHHHHHHCCC
DAKNTNETRDIFGKELAGLTQSQSQSTSAEQLKAAKNAEGTSQTIANQLTATEQLKTAEL
CCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVRMMSSQTGQEANLAGVNTDAAQDLKAVIGLQSQALQLQSGANRQELPQFQFALKQAGE
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
QTPPMQQMIQRFSPMMNQQLITMVSNGVQHAEIRLDPPELGHMMVRIQVQGDTTQVQFQV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCEEEEEEECCCCEEEEEEH
SQHQTRDLVEQAMPRLREMLAEQGMQLTDGQVSQGSGGNSDGEQGSGRGNDNGMAETDEI
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
SAEELLARSNLSTSSASGIDYYA
CHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA