Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is fliJ [C]

Identifier: 167623383

GI number: 167623383

Start: 1750952

End: 1751398

Strand: Direct

Name: fliJ [C]

Synonym: Shal_1452

Alternate gene names: 167623383

Gene position: 1750952-1751398 (Clockwise)

Preceding gene: 167623382

Following gene: 167623384

Centisome position: 33.5

GC content: 47.43

Gene sequence:

>447_bases
ATGGCTAAACCAGATCCACTGCACATGGTGCTAAAGTTAACGCAAGATGCCGAAGAGCAGGCTTCATTGCAGCTTCGCTC
GGCGCAGCTTGAGCTGCAAAGGCGTCAAAACCAGCTTGAAGCGCTACAAAACTATCGCCTCGACTATATGAAACAGATGG
AGCAACAACAGGGACAAAGCATTAGCGCTAGCCATTATCACCAATTTCATCAATTCGTTCGCCAAGTCGATGCCGCTATC
GTGCAGCAGGTCAATGCCGTAAAAGATGCCGATAATCAAAGGCAACACCGGCAAGTGTACTGGCAAGAGAAGCAACAAAA
ACGTAAAGCGGTGGAGCTGTTATTAGCGAATAAAGCCGAGAAAGCAAAACTTGCTGAATTACGAGCAGAGCAAAAAATGG
TGGATGAATTCGCCTCACAGCAGTTCTATCGTAAGCGGCAGCGTTAA

Upstream 100 bases:

>100_bases
GTTGGGGGCACAATGCCAGGCTTAACTTTTAAGCAGACCTTAGCCACTCAGACGTTAGCATATCAATGTGCGAGCAATAA
CAGTTTAGGCGCATCTTATT

Downstream 100 bases:

>100_bases
GGTTAACTGTTAACGGGTATCAATCACCCATTTTAGCGTTGCACAGCGTTAGCTATTCAATTTCTACTAGCAGTTAACTT
CCCCCCTCTTGTTGACGATA

Product: flagellar export protein FliJ

Products: NA

Alternate protein names: Flagellar Protein FliJ; Flagellar Export FliJ

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAKPDPLHMVLKLTQDAEEQASLQLRSAQLELQRRQNQLEALQNYRLDYMKQMEQQQGQSISASHYHQFHQFVRQVDAAI
VQQVNAVKDADNQRQHRQVYWQEKQQKRKAVELLLANKAEKAKLAELRAEQKMVDEFASQQFYRKRQR

Sequences:

>Translated_148_residues
MAKPDPLHMVLKLTQDAEEQASLQLRSAQLELQRRQNQLEALQNYRLDYMKQMEQQQGQSISASHYHQFHQFVRQVDAAI
VQQVNAVKDADNQRQHRQVYWQEKQQKRKAVELLLANKAEKAKLAELRAEQKMVDEFASQQFYRKRQR
>Mature_147_residues
AKPDPLHMVLKLTQDAEEQASLQLRSAQLELQRRQNQLEALQNYRLDYMKQMEQQQGQSISASHYHQFHQFVRQVDAAIV
QQVNAVKDADNQRQHRQVYWQEKQQKRKAVELLLANKAEKAKLAELRAEQKMVDEFASQQFYRKRQR

Specific function: The Flij Protein Is A Flagellar Protein That Affects Chemotactic Events. Mutations In Flij Results In Failure To Respond To Chemotactic Stimuli. [C]

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17646; Mature: 17515

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPDPLHMVLKLTQDAEEQASLQLRSAQLELQRRQNQLEALQNYRLDYMKQMEQQQGQS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ISASHYHQFHQFVRQVDAAIVQQVNAVKDADNQRQHRQVYWQEKQQKRKAVELLLANKAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KAKLAELRAEQKMVDEFASQQFYRKRQR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKPDPLHMVLKLTQDAEEQASLQLRSAQLELQRRQNQLEALQNYRLDYMKQMEQQQGQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ISASHYHQFHQFVRQVDAAIVQQVNAVKDADNQRQHRQVYWQEKQQKRKAVELLLANKAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KAKLAELRAEQKMVDEFASQQFYRKRQR
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA