| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fliL
Identifier: 167623385
GI number: 167623385
Start: 1753250
End: 1753768
Strand: Direct
Name: fliL
Synonym: Shal_1454
Alternate gene names: NA
Gene position: 1753250-1753768 (Clockwise)
Preceding gene: 167623384
Following gene: 167623386
Centisome position: 33.54
GC content: 44.7
Gene sequence:
>519_bases ATGGCGGAAGAAGCAGCGTTAGAGCTAGAAGATAGTGCCGAACCTAAAAGCAAAAAGAAACTCATTTTATTCGGCGCAAT CGGCGCGGTGCTTATTACTGTTATCGCTATCACTGCATATTTGTTATTGAGCTCAGACGATGCTGCACAAGTTACTGGTG CTGATGACGTTGTCGCTGCAGAGTCTGCGCCTCGAACGGGTGAAGCCTTTTATGCGGCAATGCCAAGACCGTTTCTATTT AATCTACCCGATAATGGCCGCACTCGTTTAGTTGAAATTAAAGTGCAACTAATGGTTCGTGGTAGCGATGATGACACTCT GATTAAAAAGCATATTCCATTAATTGAAGATGCGCTACTAACCACATTTAGTGGCGCAGATATCCAGAAATTAAGCTCTC CTGCAGGCAAGGATGAATTACGCCTGTTAGCGCTGCGAAATGTGCAAAACACTCTGCAACCCGTCACGGGGCGTACAGTG GTTGAGAAAATCTTATTTACCGGTTTTGTCATGCAATAA
Upstream 100 bases:
>100_bases ACAAGTTCGGCTTCAGGTATAGATTATTACGCATAAGCAGGTAATCTATAGCAGTTTAAGAATATTGAAATTAATCAGTA CTCGAGCAAGGGAATGAAAA
Downstream 100 bases:
>100_bases ATTGTGTGAATAAAGTGATTATTTTTTATAAGTAAAGGCGATATCGTGAGTGATTTATTAAGCCAAGACGAAATTGATGC ACTGCTCCACGGAGTCGATG
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAEEAALELEDSAEPKSKKKLILFGAIGAVLITVIAITAYLLLSSDDAAQVTGADDVVAAESAPRTGEAFYAAMPRPFLF NLPDNGRTRLVEIKVQLMVRGSDDDTLIKKHIPLIEDALLTTFSGADIQKLSSPAGKDELRLLALRNVQNTLQPVTGRTV VEKILFTGFVMQ
Sequences:
>Translated_172_residues MAEEAALELEDSAEPKSKKKLILFGAIGAVLITVIAITAYLLLSSDDAAQVTGADDVVAAESAPRTGEAFYAAMPRPFLF NLPDNGRTRLVEIKVQLMVRGSDDDTLIKKHIPLIEDALLTTFSGADIQKLSSPAGKDELRLLALRNVQNTLQPVTGRTV VEKILFTGFVMQ >Mature_171_residues AEEAALELEDSAEPKSKKKLILFGAIGAVLITVIAITAYLLLSSDDAAQVTGADDVVAAESAPRTGEAFYAAMPRPFLFN LPDNGRTRLVEIKVQLMVRGSDDDTLIKKHIPLIEDALLTTFSGADIQKLSSPAGKDELRLLALRNVQNTLQPVTGRTVV EKILFTGFVMQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18568; Mature: 18437
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEAALELEDSAEPKSKKKLILFGAIGAVLITVIAITAYLLLSSDDAAQVTGADDVVAA CCCCCCEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEC ESAPRTGEAFYAAMPRPFLFNLPDNGRTRLVEIKVQLMVRGSDDDTLIKKHIPLIEDALL CCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCHHHHHHH TTFSGADIQKLSSPAGKDELRLLALRNVQNTLQPVTGRTVVEKILFTGFVMQ HHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AEEAALELEDSAEPKSKKKLILFGAIGAVLITVIAITAYLLLSSDDAAQVTGADDVVAA CCCCCEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEC ESAPRTGEAFYAAMPRPFLFNLPDNGRTRLVEIKVQLMVRGSDDDTLIKKHIPLIEDALL CCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCHHHHHHH TTFSGADIQKLSSPAGKDELRLLALRNVQNTLQPVTGRTVVEKILFTGFVMQ HHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA