Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622974

Identifier: 167622974

GI number: 167622974

Start: 1268336

End: 1270855

Strand: Reverse

Name: 167622974

Synonym: Shal_1040

Alternate gene names: NA

Gene position: 1270855-1268336 (Counterclockwise)

Preceding gene: 167622975

Following gene: 167622973

Centisome position: 24.31

GC content: 48.25

Gene sequence:

>2520_bases
ATGTCTCGCAACCCGCTCTTAATGTATGCCCTGATAGCCATCTGCAGTCTGCTGTTATTCAGCGCTAATGCGATGAGCAA
CAGCTATCAATTACCCACACAAGCATTACAGGATGTCGTTGAGCAAACTAAAAATGTAAGCACTCGCTTATCTCAAGATA
AGCAATGGCTTGCGATATTAACCCCAAGAAAGCACCTTTCAATCGATACGCTGGCACAAACTGAGCGCAAGCTTGCAGGT
CTAAGAGTCTCACCAGAGCTGCTGATCCCAAGCCGAATAAAGTACAGCTATTTGAGCGTCGAGCTAATTAACCTCACTAA
ATTAAAAGCCGATGCGGAACCTTTTACCATACCACTACCAAGCGCTATGCAGTTGGCCAATGTCAGCTTCTCTCCCGATA
GTCGCTACCTAAGCTATATCGGCTTAACTAAGCATGGCGCAGATCTGTTTATTTATGATTTAGAAAAACAGCAGAGCCGC
AAACTCAATCCAAGCCGCCTAAACGCCACATTGGGATTGAAATATATCTGGCAAAACGACAGCAAGGGAGTGTTTACTAA
CCTTGCAACAGCGACTAGTTCTAATAGCAACCCAGTGGCAACCGCACCGAATATCAGTGAAACCTCAGGCCAGAAAGCGC
CGCGCAGAACCTATCAAGACTTGCTTAAGAACCCACAAGATGAGGCCGAATTCACCGCATTAACCACCAGTCAGTTAAGC
TTTATCTCCCTTAATGGCGATGTTAAGCCTATCGGCAAGCCCGCCATTAATATCGGCTACAGTCTGTCGCCTAACGATAA
ATATTTAGTGGTCAAACGTATCGCTTCGCCTTTCTCTTATATGGTCAAATACTATGACTTCGCCCAGTCGGTAGAGCTAT
TTAGCCAGACGGGTGAAAAACTACAAACCCTTGCGCACCTAGAAAGCAGTGAGTACCGCCCTCCGGGCAGCGACTCGGTA
CGCAAAGGTCCGCGCATGATCCATTGGCGTAGCGATAAGCCAGATACCCTCGCCTTCGTGAAAGCCCTCGATAAGGGTGA
CAGTCGCATCAAAATCAACTACCGCGATCAACTGCTACAACTCAGTGCACCTTTTACTCAAAAGCCTATGCCACTCACCA
AGACCCCTTGGCGGATCAGTAAAATAACCTGGGGAGAGCAAAACACTGCACTCGTCACAGAGCGACAATCAGATAAGAAA
CAGATGCGTGTCAGTCTGTTAGATACCTCCACTGACAGTTCTCAAGGGTTATCTCTCTGGTATCAAAAGGCAATTCGCGA
CACCTATAATGCCCCCGGTAGTCTTTATCGTCAAAACGCTAAGCTTAACGGTAAACATTTAGGACGAGTCTTCAAGTTAC
ATGACAATAGCTTACTGCACTACGGTCTTGGCGCCTCACCTGAGGGCTATCAGCCTTTCTTACAGTCATCATTACTGACA
CCACTAAAAGGTGAGCAAAGCATAGCTAAACCAACGACCCTGTGGCAGTCATCGACGCAGCAATTGGAAAGAGTTAAATA
TATTCTCAAGCTTGAGCCGCTAACGCTGATCATCAGCAGGCAAGGCACTGATACCCCCTCGCACTTGGTGATGCTAGATG
TTGCGTCAGGTGACGAGCAACTGCTGTATCAAAACCAACATAAGCTCGAGGCTTACCAAGGCATGACTCGCCAGCTAGTT
AACTACAGCCGTGATGACGGCTTGCCGCTATCGGGCGTGCTATATCTCCCCGCAGGTTATAGTACTGAGGATGGCCCACT
ACCTGTTTTGATGTGGGCTTATCCCCGAGAGTACAAAAATGCTGAGGTCGCCAGCCAAGTAAACTACTCGCCTAATCAAT
ACAATCAAATTAGCCCCAAAGGCCCGGTACCATTTGCCGCCAAGGGGTATGCTATTTTCGACAAGGTTGCCATGCCGATT
GTTGGTGAGGGGAGTGATAAACCCAACGATAGCTTTCGCCGTCAGTTAGTCGCTAACGCCAATGCCGCAATCGATACCTT
AGTGGAGATGGGCGTTGCCGATAGAGATCGCGTAGCCATTGGCGGTCACTCTTATGGTGCCTTTATGGTAGCGAACCTGC
TGGCCCATTCAGACCTGTTTGCCGCTGGTATTGCCAGAAGCGGCGCCTACAACCGCACGTTAACTCCCTTTGGTTTTCAG
CATGAGAAACGTAATTTCTGGGAGGCTCCGAGCCTCTACCAACAGATGTCTCCCTTTACCCATGCCGATAAAATCGATGA
ACCATTGCTGCTGATGCACGGCGAAATGGACTCAAACTCCGGCACCTATCCGATGCAATCATCGAGACTATTCAAGGCAA
TTCGAGGGCTCGGAGGGCAAGCACGTTTAGTGACCTTTCCCTATGAGAGCCATAGCTATAAAGCGAAAGAATCGATTATG
CACATGCTGTGGGAACAAGAAACTTGGCTTGAGCAGTATCTAAAAAAGCCTGCTCTGGCTCGAGGCAGCGAAGCGCTTAA
ACAGAGGAGTGAGACTGAAACGCAAATGACTTTTCATTAA

Upstream 100 bases:

>100_bases
TTTAATCTCGTTTAAATCTCCCTTCGATACGAGAAATAAGCGCCCAACTTTGGGCGCTTATCTTTCCCGCTTACCTCTTT
CCTATTATCAGGAGATAAGA

Downstream 100 bases:

>100_bases
ACCTTAACCCCGATATAAGGCTGCACGAGCGCAATGAGTTGCAGCCATTTATTTCCCATTTGCGATTTTGGATAGCTGAC
CCATGACTAATTTAAACTCG

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: Peptidase S9 Prolyl Oligopeptidase Active Site Region; Glutamyl Peptidase; Acylaminoacyl-Peptidase; Prolyl Oligopeptidase Family Protein; Acylamino-Acid-Releasing; Aminoacyl Peptidase; Peptidase; Prolyl Oligopeptidase; Peptidase S9A/B/C Family Catalytic Domain Protein; Exported Oligopeptidase; Beta-Lactamase; Serine Peptidase; Histidinol Phosphate Phosphatase HisJ Family; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase Family; S9C Family Peptidase; Peptidase S9A/B/C Family; S9 Family Peptidase; X-Pro Dipeptidyl-Peptidase; Acylaminoacyl Peptidase; Secreted Protein

Number of amino acids: Translated: 839; Mature: 838

Protein sequence:

>839_residues
MSRNPLLMYALIAICSLLLFSANAMSNSYQLPTQALQDVVEQTKNVSTRLSQDKQWLAILTPRKHLSIDTLAQTERKLAG
LRVSPELLIPSRIKYSYLSVELINLTKLKADAEPFTIPLPSAMQLANVSFSPDSRYLSYIGLTKHGADLFIYDLEKQQSR
KLNPSRLNATLGLKYIWQNDSKGVFTNLATATSSNSNPVATAPNISETSGQKAPRRTYQDLLKNPQDEAEFTALTTSQLS
FISLNGDVKPIGKPAINIGYSLSPNDKYLVVKRIASPFSYMVKYYDFAQSVELFSQTGEKLQTLAHLESSEYRPPGSDSV
RKGPRMIHWRSDKPDTLAFVKALDKGDSRIKINYRDQLLQLSAPFTQKPMPLTKTPWRISKITWGEQNTALVTERQSDKK
QMRVSLLDTSTDSSQGLSLWYQKAIRDTYNAPGSLYRQNAKLNGKHLGRVFKLHDNSLLHYGLGASPEGYQPFLQSSLLT
PLKGEQSIAKPTTLWQSSTQQLERVKYILKLEPLTLIISRQGTDTPSHLVMLDVASGDEQLLYQNQHKLEAYQGMTRQLV
NYSRDDGLPLSGVLYLPAGYSTEDGPLPVLMWAYPREYKNAEVASQVNYSPNQYNQISPKGPVPFAAKGYAIFDKVAMPI
VGEGSDKPNDSFRRQLVANANAAIDTLVEMGVADRDRVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGFQ
HEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSSRLFKAIRGLGGQARLVTFPYESHSYKAKESIM
HMLWEQETWLEQYLKKPALARGSEALKQRSETETQMTFH

Sequences:

>Translated_839_residues
MSRNPLLMYALIAICSLLLFSANAMSNSYQLPTQALQDVVEQTKNVSTRLSQDKQWLAILTPRKHLSIDTLAQTERKLAG
LRVSPELLIPSRIKYSYLSVELINLTKLKADAEPFTIPLPSAMQLANVSFSPDSRYLSYIGLTKHGADLFIYDLEKQQSR
KLNPSRLNATLGLKYIWQNDSKGVFTNLATATSSNSNPVATAPNISETSGQKAPRRTYQDLLKNPQDEAEFTALTTSQLS
FISLNGDVKPIGKPAINIGYSLSPNDKYLVVKRIASPFSYMVKYYDFAQSVELFSQTGEKLQTLAHLESSEYRPPGSDSV
RKGPRMIHWRSDKPDTLAFVKALDKGDSRIKINYRDQLLQLSAPFTQKPMPLTKTPWRISKITWGEQNTALVTERQSDKK
QMRVSLLDTSTDSSQGLSLWYQKAIRDTYNAPGSLYRQNAKLNGKHLGRVFKLHDNSLLHYGLGASPEGYQPFLQSSLLT
PLKGEQSIAKPTTLWQSSTQQLERVKYILKLEPLTLIISRQGTDTPSHLVMLDVASGDEQLLYQNQHKLEAYQGMTRQLV
NYSRDDGLPLSGVLYLPAGYSTEDGPLPVLMWAYPREYKNAEVASQVNYSPNQYNQISPKGPVPFAAKGYAIFDKVAMPI
VGEGSDKPNDSFRRQLVANANAAIDTLVEMGVADRDRVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGFQ
HEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSSRLFKAIRGLGGQARLVTFPYESHSYKAKESIM
HMLWEQETWLEQYLKKPALARGSEALKQRSETETQMTFH
>Mature_838_residues
SRNPLLMYALIAICSLLLFSANAMSNSYQLPTQALQDVVEQTKNVSTRLSQDKQWLAILTPRKHLSIDTLAQTERKLAGL
RVSPELLIPSRIKYSYLSVELINLTKLKADAEPFTIPLPSAMQLANVSFSPDSRYLSYIGLTKHGADLFIYDLEKQQSRK
LNPSRLNATLGLKYIWQNDSKGVFTNLATATSSNSNPVATAPNISETSGQKAPRRTYQDLLKNPQDEAEFTALTTSQLSF
ISLNGDVKPIGKPAINIGYSLSPNDKYLVVKRIASPFSYMVKYYDFAQSVELFSQTGEKLQTLAHLESSEYRPPGSDSVR
KGPRMIHWRSDKPDTLAFVKALDKGDSRIKINYRDQLLQLSAPFTQKPMPLTKTPWRISKITWGEQNTALVTERQSDKKQ
MRVSLLDTSTDSSQGLSLWYQKAIRDTYNAPGSLYRQNAKLNGKHLGRVFKLHDNSLLHYGLGASPEGYQPFLQSSLLTP
LKGEQSIAKPTTLWQSSTQQLERVKYILKLEPLTLIISRQGTDTPSHLVMLDVASGDEQLLYQNQHKLEAYQGMTRQLVN
YSRDDGLPLSGVLYLPAGYSTEDGPLPVLMWAYPREYKNAEVASQVNYSPNQYNQISPKGPVPFAAKGYAIFDKVAMPIV
GEGSDKPNDSFRRQLVANANAAIDTLVEMGVADRDRVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGFQH
EKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSSRLFKAIRGLGGQARLVTFPYESHSYKAKESIMH
MLWEQETWLEQYLKKPALARGSEALKQRSETETQMTFH

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94075; Mature: 93944

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNPLLMYALIAICSLLLFSANAMSNSYQLPTQALQDVVEQTKNVSTRLSQDKQWLAIL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
TPRKHLSIDTLAQTERKLAGLRVSPELLIPSRIKYSYLSVELINLTKLKADAEPFTIPLP
CCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEEEEEEEEEECCCCCEEECCC
SAMQLANVSFSPDSRYLSYIGLTKHGADLFIYDLEKQQSRKLNPSRLNATLGLKYIWQND
CHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHCCCCHHHHCCEEEEEEEEECC
SKGVFTNLATATSSNSNPVATAPNISETSGQKAPRRTYQDLLKNPQDEAEFTALTTSQLS
CCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEE
FISLNGDVKPIGKPAINIGYSLSPNDKYLVVKRIASPFSYMVKYYDFAQSVELFSQTGEK
EEEECCCCCCCCCCCEEECEEECCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LQTLAHLESSEYRPPGSDSVRKGPRMIHWRSDKPDTLAFVKALDKGDSRIKINYRDQLLQ
HHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHE
LSAPFTQKPMPLTKTPWRISKITWGEQNTALVTERQSDKKQMRVSLLDTSTDSSQGLSLW
ECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHEEEEEECCCCCCCHHHHH
YQKAIRDTYNAPGSLYRQNAKLNGKHLGRVFKLHDNSLLHYGLGASPEGYQPFLQSSLLT
HHHHHHHHCCCCHHHHHCCCCCCCHHHCEEEEECCCCEEEECCCCCCCCCHHHHHHHCCC
PLKGEQSIAKPTTLWQSSTQQLERVKYILKLEPLTLIISRQGTDTPSHLVMLDVASGDEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCEEEEEEECCCCHH
LLYQNQHKLEAYQGMTRQLVNYSRDDGLPLSGVLYLPAGYSTEDGPLPVLMWAYPREYKN
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCC
AEVASQVNYSPNQYNQISPKGPVPFAAKGYAIFDKVAMPIVGEGSDKPNDSFRRQLVANA
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHCC
NAAIDTLVEMGVADRDRVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGFQ
CHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSSRLFKAIRGLGGQ
CCCCCCCCCHHHHHHCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC
ARLVTFPYESHSYKAKESIMHMLWEQETWLEQYLKKPALARGSEALKQRSETETQMTFH
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEECC
>Mature Secondary Structure 
SRNPLLMYALIAICSLLLFSANAMSNSYQLPTQALQDVVEQTKNVSTRLSQDKQWLAIL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
TPRKHLSIDTLAQTERKLAGLRVSPELLIPSRIKYSYLSVELINLTKLKADAEPFTIPLP
CCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEEEEEEEEEECCCCCEEECCC
SAMQLANVSFSPDSRYLSYIGLTKHGADLFIYDLEKQQSRKLNPSRLNATLGLKYIWQND
CHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHCCCCHHHHCCEEEEEEEEECC
SKGVFTNLATATSSNSNPVATAPNISETSGQKAPRRTYQDLLKNPQDEAEFTALTTSQLS
CCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEE
FISLNGDVKPIGKPAINIGYSLSPNDKYLVVKRIASPFSYMVKYYDFAQSVELFSQTGEK
EEEECCCCCCCCCCCEEECEEECCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LQTLAHLESSEYRPPGSDSVRKGPRMIHWRSDKPDTLAFVKALDKGDSRIKINYRDQLLQ
HHHHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHE
LSAPFTQKPMPLTKTPWRISKITWGEQNTALVTERQSDKKQMRVSLLDTSTDSSQGLSLW
ECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHEEEEEECCCCCCCHHHHH
YQKAIRDTYNAPGSLYRQNAKLNGKHLGRVFKLHDNSLLHYGLGASPEGYQPFLQSSLLT
HHHHHHHHCCCCHHHHHCCCCCCCHHHCEEEEECCCCEEEECCCCCCCCCHHHHHHHCCC
PLKGEQSIAKPTTLWQSSTQQLERVKYILKLEPLTLIISRQGTDTPSHLVMLDVASGDEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCEEEEEEECCCCHH
LLYQNQHKLEAYQGMTRQLVNYSRDDGLPLSGVLYLPAGYSTEDGPLPVLMWAYPREYKN
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCC
AEVASQVNYSPNQYNQISPKGPVPFAAKGYAIFDKVAMPIVGEGSDKPNDSFRRQLVANA
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHCC
NAAIDTLVEMGVADRDRVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGFQ
CHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSSRLFKAIRGLGGQ
CCCCCCCCCHHHHHHCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC
ARLVTFPYESHSYKAKESIMHMLWEQETWLEQYLKKPALARGSEALKQRSETETQMTFH
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA