| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is gltX
Identifier: 16126148
GI number: 16126148
Start: 2101378
End: 2102790
Strand: Direct
Name: gltX
Synonym: CC_1905
Alternate gene names: 16126148
Gene position: 2101378-2102790 (Clockwise)
Preceding gene: 16126145
Following gene: 16126149
Centisome position: 52.31
GC content: 66.24
Gene sequence:
>1413_bases ATGTCGAACCCCACCCCTACCGGCGTCGTCACGCGCTTCGCCCCCTCGCCCACCGGTTTCCTGCATATCGGCGGCGCTCG TACGGCGCTGTTCAACTGGTTATATGCACGCCATACGGGAGGGAAGTTCCTTATTCGCGTCGAGGACACCGATCGCGAGC GCTCTACCGAAGCGGCCGTCGCCGCGATCTTCGAAGGGCTGGACTGGCTGGGCCTGAAATCCGACGACGAGGTGATCTTC CAGCACACCCGCGCGCCGCGTCACGTGGAGGTGGTGCATGAGCTGCTGGCCAAGGGCCGCGCCTATCGCTGCTGGATGAG CATCGAGGAGCTGGAGGTCGCCCGCGAAAAGGCCCGCGCCGAGGGCCGCGCGATCCGTTCGCCGTGGCGCGACGCGCCTG AAGGCGACCTCTCCGCGCCCCACGTGATCCGCTTCAAGGGACCGCTGGACGGCGAGACCCTGGTCAACGACCTGGTCAAG GGGCCTGTCACTTTCAAGAACATCGAGTTGGACGATCTTGTCCTGCTGCGCGCAGACGGCGCCCCCACGTACAATCTCGC GGTCGTGGTGGATGATCACGACATGGGCGTGACCCACGTGATCCGAGGCGACGATCACCTGAACAACGCCGCCCGCCAGA CCCTGATCTATCAGGCCATGGACTGGGCGGTGCCGGCCTTCGCCCACATCCCGCTGATTCACGGCCCGGACGGCGCCAAG CTCTCCAAGCGCCACGGCGCCCAGGCCGTCGGCGAATTCGCTGACCTTGGCTACATCCCCGAAGGCATGCGCAACTATCT GGCCCGCCTGGGCTGGGGTCATGGCGACGACGAAGTCTTCACCGACGAGCAGGCGATCAGCTGGTTCGACGTCGCCGATG TCGTCAAAGCCCCCGCGCGCCTGGACTGGGCCAAGCTCAATCACATCAACGCCCAGCACCTGCGCAAGGCCGACGACGCG CGTCTGACGGCCCTAGCCTTGGCGGCGGCGGAAACGCGCGGCGAGCCCCTGCCCGCCGACGCGGCCGAGCGCATCGCCCG CACGGTTCCCGAGGTCAAGGAAGGCGCCAAGACGATCCTCGAACTGGTCGATCACTGCGCATTCGCGCTGAAGACCCGCC CATTGGCGCTGGAAGAGAAAACCCAAAAACAGCTTACCGAAGAGACGGTCGAGCGGCTGAAGCGTCTGCGCGACCAACTG GCCGCCGCGCCCGACTTCGACGCTGCAACCCTGGAAACCGTGTTGAAATCATTCGCGGAATCCGAAGGCGTCGGCTTTGG CAAGTTCGGTCCCGCGCTGCGCGGAGTCCTCACGGGCGGGGCGCAGGCTCCCGACTTGAACAAGACCATGGCGGCCCTCT CCCGCGATGAGGCGATTGGCCGTCTTGACGACGCGCTAGCGCCTCGCGCATGA
Upstream 100 bases:
>100_bases CCCGGCGTTGAGCCGCATGCTAAGACGCCTCGCCCGCGTCGCTTCGCGGCGAACGTTTCCCAGCGCCGCTCCGGCGCCCT GTCCTGCAGCCTTGAAGTCC
Downstream 100 bases:
>100_bases GGCGCTATAACGCACCCGCGAAAAGCGAAAATTGGACTGCCCGTCCCAATAATGAAGGGGTCTACGGATGACCGATAAAG CCACGCTGACGATCGGCGAC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MSNPTPTGVVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKFLIRVEDTDRERSTEAAVAAIFEGLDWLGLKSDDEVIF QHTRAPRHVEVVHELLAKGRAYRCWMSIEELEVAREKARAEGRAIRSPWRDAPEGDLSAPHVIRFKGPLDGETLVNDLVK GPVTFKNIELDDLVLLRADGAPTYNLAVVVDDHDMGVTHVIRGDDHLNNAARQTLIYQAMDWAVPAFAHIPLIHGPDGAK LSKRHGAQAVGEFADLGYIPEGMRNYLARLGWGHGDDEVFTDEQAISWFDVADVVKAPARLDWAKLNHINAQHLRKADDA RLTALALAAAETRGEPLPADAAERIARTVPEVKEGAKTILELVDHCAFALKTRPLALEEKTQKQLTEETVERLKRLRDQL AAAPDFDAATLETVLKSFAESEGVGFGKFGPALRGVLTGGAQAPDLNKTMAALSRDEAIGRLDDALAPRA
Sequences:
>Translated_470_residues MSNPTPTGVVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKFLIRVEDTDRERSTEAAVAAIFEGLDWLGLKSDDEVIF QHTRAPRHVEVVHELLAKGRAYRCWMSIEELEVAREKARAEGRAIRSPWRDAPEGDLSAPHVIRFKGPLDGETLVNDLVK GPVTFKNIELDDLVLLRADGAPTYNLAVVVDDHDMGVTHVIRGDDHLNNAARQTLIYQAMDWAVPAFAHIPLIHGPDGAK LSKRHGAQAVGEFADLGYIPEGMRNYLARLGWGHGDDEVFTDEQAISWFDVADVVKAPARLDWAKLNHINAQHLRKADDA RLTALALAAAETRGEPLPADAAERIARTVPEVKEGAKTILELVDHCAFALKTRPLALEEKTQKQLTEETVERLKRLRDQL AAAPDFDAATLETVLKSFAESEGVGFGKFGPALRGVLTGGAQAPDLNKTMAALSRDEAIGRLDDALAPRA >Mature_469_residues SNPTPTGVVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKFLIRVEDTDRERSTEAAVAAIFEGLDWLGLKSDDEVIFQ HTRAPRHVEVVHELLAKGRAYRCWMSIEELEVAREKARAEGRAIRSPWRDAPEGDLSAPHVIRFKGPLDGETLVNDLVKG PVTFKNIELDDLVLLRADGAPTYNLAVVVDDHDMGVTHVIRGDDHLNNAARQTLIYQAMDWAVPAFAHIPLIHGPDGAKL SKRHGAQAVGEFADLGYIPEGMRNYLARLGWGHGDDEVFTDEQAISWFDVADVVKAPARLDWAKLNHINAQHLRKADDAR LTALALAAAETRGEPLPADAAERIARTVPEVKEGAKTILELVDHCAFALKTRPLALEEKTQKQLTEETVERLKRLRDQLA AAPDFDAATLETVLKSFAESEGVGFGKFGPALRGVLTGGAQAPDLNKTMAALSRDEAIGRLDDALAPRA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=500, Percent_Identity=31.4, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI62241042, Length=225, Percent_Identity=25.7777777777778, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788743, Length=466, Percent_Identity=40.7725321888412, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI226510925, Length=247, Percent_Identity=35.6275303643725, Blast_Score=135, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71993394, Length=335, Percent_Identity=34.9253731343284, Blast_Score=179, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6324540, Length=330, Percent_Identity=38.7878787878788, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321192, Length=226, Percent_Identity=28.7610619469027, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24665321, Length=493, Percent_Identity=32.657200811359, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI17864488, Length=129, Percent_Identity=35.6589147286822, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_CAUCR (Q9A721)
Other databases:
- EMBL: AE005673 - PIR: D87485 - RefSeq: NP_420712.1 - ProteinModelPortal: Q9A721 - SMR: Q9A721 - GeneID: 942561 - GenomeReviews: AE005673_GR - KEGG: ccr:CC_1905 - NMPDR: fig|190650.1.peg.1892 - TIGR: CC_1905 - HOGENOM: HBG628189 - OMA: LPYVMGQ - ProtClustDB: PRK01406 - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 51465; Mature: 51334
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 243-243
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPTPTGVVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKFLIRVEDTDRERSTEAAV CCCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHH AAIFEGLDWLGLKSDDEVIFQHTRAPRHVEVVHELLAKGRAYRCWMSIEELEVAREKARA HHHHHCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH EGRAIRSPWRDAPEGDLSAPHVIRFKGPLDGETLVNDLVKGPVTFKNIELDDLVLLRADG CCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCEEEEEECC APTYNLAVVVDDHDMGVTHVIRGDDHLNNAARQTLIYQAMDWAVPAFAHIPLIHGPDGAK CCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC LSKRHGAQAVGEFADLGYIPEGMRNYLARLGWGHGDDEVFTDEQAISWFDVADVVKAPAR HHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC LDWAKLNHINAQHLRKADDARLTALALAAAETRGEPLPADAAERIARTVPEVKEGAKTIL CCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELVDHCAFALKTRPLALEEKTQKQLTEETVERLKRLRDQLAAAPDFDAATLETVLKSFAE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SEGVGFGKFGPALRGVLTGGAQAPDLNKTMAALSRDEAIGRLDDALAPRA HCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNPTPTGVVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKFLIRVEDTDRERSTEAAV CCCCCCCEEEECCCCCCCEEEECCHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHH AAIFEGLDWLGLKSDDEVIFQHTRAPRHVEVVHELLAKGRAYRCWMSIEELEVAREKARA HHHHHCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH EGRAIRSPWRDAPEGDLSAPHVIRFKGPLDGETLVNDLVKGPVTFKNIELDDLVLLRADG CCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCEEEEEECC APTYNLAVVVDDHDMGVTHVIRGDDHLNNAARQTLIYQAMDWAVPAFAHIPLIHGPDGAK CCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCC LSKRHGAQAVGEFADLGYIPEGMRNYLARLGWGHGDDEVFTDEQAISWFDVADVVKAPAR HHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC LDWAKLNHINAQHLRKADDARLTALALAAAETRGEPLPADAAERIARTVPEVKEGAKTIL CCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ELVDHCAFALKTRPLALEEKTQKQLTEETVERLKRLRDQLAAAPDFDAATLETVLKSFAE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH SEGVGFGKFGPALRGVLTGGAQAPDLNKTMAALSRDEAIGRLDDALAPRA HCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647