| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901382
Identifier: 159901382
GI number: 159901382
Start: 6204881
End: 6206362
Strand: Direct
Name: 159901382
Synonym: Haur_4871
Alternate gene names: NA
Gene position: 6204881-6206362 (Clockwise)
Preceding gene: 159901380
Following gene: 159901383
Centisome position: 97.77
GC content: 48.99
Gene sequence:
>1482_bases ATGACCCGCCAACAACAGCTTGCGCTGTATCTTTTGCCAGTGGCTTTTGGGCTGGCCCTGATTGCCGATTTACTAGGCTT GTTTCACCAATTATGGGGCATTAATTTTGTACTTTGGACGTTGCTCTCAAGCGGCGCAATCGTTGGCTTGGCGTTTAAGC AAGCCCAAGCCTTGCCCAAAGAAACCTGGCTCTGGCTCGTAGTTGCCAATATCGCAAGCTTGGGCTTTGTGCTGCGCGAT AATGGCGCGATCTTGTTTTGGCTGGGCTTGTGTTGGGTCTTGGCTTGGATGCTCATTTTCAGCCAACCTTACCGCGCTCA TTGGCAATTGGCCTCAATTCGCGGCTGGATTGTATCGGGCGTGGTGGCTGGATTTGGGGCTGCGTTCGGTAGCTTTGCCG CATCGATTCATCTGCCACTGCGGGTTGGTAATTTCACTAGCGCCAAATTACGGCCAATTTTGATTGGGCTAGGTTTAGCC TTGCCATTATTGTGTGTGTTTGGCGGCTTGTTTGCCTCAGCCGATGCAGTATTTGAAAATATTTTCGCCGATTTGTTTAA CTGGAATTTGGATTGGCTGTTTGAGCATGCATTTGTGGTGTTGTTTAGCACTTGGGCGATTTTGGGTTGTGGCTGGATTT TATTTGCTGCACCAAAACCAGATATTGCGTTGAGCCAACGTCCAAGCTTATTCAACATTGGCAAGATCGAAGTTGGCATC ATTTTGGGCTTGCTGAATGCGCTTTTTGGTTTGTTTGTATTGATTCAAATTCGCTATTTATTTGGTGGCGAACAGCAAAT TGCCGAAGGTATTAGCTATGCCGATTATGCCCGCCGTGGCTTTTTCGAGTTGGTAACCGTGGCCTTATTGGTCTTGCCAA CGTTGCTAGTTGGTAGCTGGCTGAGTGAACAACGAACTGAAGCCCAACCCTTGTTTCGGATTTTGGCCTTGGTATTATTG GTACAAGTTGGGGTGGTGTTGGCTTCGGCTGTTTCGCGTATGCTGCTCTACATCGATGCTTATGGTTTGACTGAATCGCG GATTCAAGCAACAGCCTTGATGATTTGGATTGTGCTGGTGGCCTTGTGGTTTGTGGCAACCGTGCTGCGCCAACGGGGTC AATATTTTGCCAATGGAGCCTTGGTTGCGGCCATGTTGGTGCTGATTGGCTTGGTTTTGTTGAATCCTAGCAATTTGATT GTGCGCTACAACGCCAGCCATCGCGGCGTGGCCAGCTTTGATGGCTACTACATTGGCAGTTTGGCCGATGATGCTGATGC CGTGCCAGCGATTATCGAGGTGCTGCCGAGCTTGCCTGCGGAACAAAATTGCCAAATTGCTACGCTCTTATTAGATAATT GGCAAGAAAATAACGACGATTGGCGCAGTGCCAACCTTAGTCGCAGCAATGCTCGTCAGGCTGTGCTGCAAAACGAACGA ATGCTGACCGACATGAGTTGTCCAATTGATCGCTCAATGTGA
Upstream 100 bases:
>100_bases CATTTACGCTGCACTTGAGTGCGCCGAATCTGGCACTTGGGTGCTAGCGCTGGCATCTACAATCCAAGCACCGAGGATAG CTTGATTGCGAGGAAATTGT
Downstream 100 bases:
>100_bases TCTTGGTTGCTGGTGGTAAGTGGTACAATTGACCTTCGCTACCGCCCAAGCGTGGAGCACCAATCAGATCAATCTGGCAA TTGTTGCCAGCAGCACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPKETWLWLVVANIASLGFVLRD NGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSGVVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLA LPLLCVFGGLFASADAVFENIFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSWLSEQRTEAQPLFRILALVLL VQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLVALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLI VRYNASHRGVASFDGYYIGSLADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER MLTDMSCPIDRSM
Sequences:
>Translated_493_residues MTRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPKETWLWLVVANIASLGFVLRD NGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSGVVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLA LPLLCVFGGLFASADAVFENIFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSWLSEQRTEAQPLFRILALVLL VQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLVALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLI VRYNASHRGVASFDGYYIGSLADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER MLTDMSCPIDRSM >Mature_492_residues TRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPKETWLWLVVANIASLGFVLRDN GAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSGVVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLAL PLLCVFGGLFASADAVFENIFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGII LGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSWLSEQRTEAQPLFRILALVLLV QVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLVALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLIV RYNASHRGVASFDGYYIGSLADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNERM LTDMSCPIDRSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54315; Mature: 54183
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCH ETWLWLVVANIASLGFVLRDNGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSG HHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLALPLLCVFGGLFASADAVFEN HHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCEECCHHHHHH ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSW HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEQRTEAQPLFRILALVLLVQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLIVRYNASHRGVASFDGYYIGS HHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECC LADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCHHHCCCCHHHHHHHHHHCCH MLTDMSCPIDRSM HHHCCCCCCCCCC >Mature Secondary Structure TRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCH ETWLWLVVANIASLGFVLRDNGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSG HHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLALPLLCVFGGLFASADAVFEN HHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCEECCHHHHHH ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSW HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEQRTEAQPLFRILALVLLVQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLIVRYNASHRGVASFDGYYIGS HHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECC LADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCHHHCCCCHHHHHHHHHHCCH MLTDMSCPIDRSM HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA