| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901269
Identifier: 159901269
GI number: 159901269
Start: 6063822
End: 6064337
Strand: Reverse
Name: 159901269
Synonym: Haur_4757
Alternate gene names: NA
Gene position: 6064337-6063822 (Counterclockwise)
Preceding gene: 159901270
Following gene: 159901268
Centisome position: 95.55
GC content: 36.05
Gene sequence:
>516_bases TTGTTTATGTCATTTATGTCGCTCTATTGGATATATCAAGGCCTGTCTGATAATTGGATTTCGGTAATGCTTAACTCAGT GGTTGCTTTATATTGTGTTTTTGAGGCAAATACGTATTTGATTGTTGATTCAGAAGGATTATCTATTCATCGAATATTTA GAGATCGGATACATCTAGCCTGGAGCGATATAGCTGAAAAACAACATTTGAATATAGGCAAATATACCCTAGATTATCTT TTATTGAACGTACCAAATCCGTCAATCAAAAGTCTCAATTCGAATCAAATCCCGAAGGAGCTACGATCAAGCATTTTTAG GCTCGATCTATGGGAGCGATCGAGCGAATTGATCGAACTAGTTGAGCCATATCTCTCAACAGAACATCCATCAAACCAAT TTTTTGTGCCGTTCAATCATATAGATCAAACAAGAATAACCAGAATTTCAATCTTAGTTATCATTGTCGCATTTGCTGTA GCAGCTTTTACAATCTGGAGACTTTTTGCTGGATAG
Upstream 100 bases:
>100_bases GTTATATTAATTTTTGTTTATTTATTTTTTTTATAGAAAGTAAATTATGAGTTCTGGAAAATTTAGACCTAAGAATTTTA GATCTTATGTATCAGTTTCT
Downstream 100 bases:
>100_bases ATTGTTAGCGGTAGTAATTGTAACTTTTAAAGAACTTCCTGTGTAGTATCTAAGTATACAGTTGCTAAGTATAATATTCC ATAGCAACGGCTAAGCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLAWSDIAEKQHLNIGKYTLDYL LLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIELVEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAV AAFTIWRLFAG
Sequences:
>Translated_171_residues MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLAWSDIAEKQHLNIGKYTLDYL LLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIELVEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAV AAFTIWRLFAG >Mature_171_residues MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLAWSDIAEKQHLNIGKYTLDYL LLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIELVEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAV AAFTIWRLFAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19933; Mature: 19933
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLA CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHH WSDIAEKQHLNIGKYTLDYLLLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIEL HHHHHHHHCCCCCCEEEEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAVAAFTIWRLFAG HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLA CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHH WSDIAEKQHLNIGKYTLDYLLLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIEL HHHHHHHHCCCCCCEEEEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAVAAFTIWRLFAG HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA