| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901256
Identifier: 159901256
GI number: 159901256
Start: 6053294
End: 6054097
Strand: Direct
Name: 159901256
Synonym: Haur_4744
Alternate gene names: NA
Gene position: 6053294-6054097 (Clockwise)
Preceding gene: 159901255
Following gene: 159901259
Centisome position: 95.38
GC content: 51.62
Gene sequence:
>804_bases ATGACAACCTACACTTGGCTTGGCCACGACCGGCCACATCTTGATACCTTGTTCGTTCAAGACCTCGGGGCGATGGTTTT CGCCAGTTTTGGCGGGGTGGTCGCCCAAGGTGCTCGGAAAAATGAAGATGCTGCGGCTATTTTCATCGATCCTGCTGGCG GATGGGAATTGGCGGTGGTGATCGATGCTCATCATTCAGCCCAAAGTGCCCTGTTGATTTTAGAAACCTTGGTTGGAGCC GAAACCCAACTGCGCGAATGTTTGAACCAACCCTTGAATCAAGCCTTTTTTAGCTTGGATCAGGCTTTACTTGATATCTT TCGTAGCAATCGCTTTCGGGCGCGGTGTGCCGCAATTCAAGGCGAGGCCTCGTGTTTGTTCGTCGCCCGCAAAGATGAAT ATGTTTGGTATTGGGCAGTTGGCGATTGCATTGGCTATATTTTTCACCCCAGCATTGCACGGCTGGGCGAGATGCAACTC AACCAACGCCGCTTCTACGAATGGATTGGCAATGTCAATACCTGGGATGGCGTGTTGCCTTCGTACTCCACCGGCATTCG TTTGCTTCAACCTGGATTGACCACGATTATGTTAACGACTGATGGCTTGCTGGAATGTGGCACACGCCCGTTTGAAAACC CAACCACCTTGTATAACGCGGTTTGTTGGGAGCAGCACAGTCTGCCACGAGCTGCCCGTGCCTTGCTCGAACGAGTCCAA ACTGAAGGCGGTCGCGATAGTGCCACTGCCATTTTGTGGCAATTTGATAGCACATGGGCTGGAATTAATCGCGATTTCCG CTAA
Upstream 100 bases:
>100_bases AAACCTTGTTACCAGTTGCCGCCCGTGAATTTGCCGCCTTGCAAGAGCGCGATAATCCTTTTCCAACCCTGAATTATCGT TTGTTTGGGAATTTTGAACG
Downstream 100 bases:
>100_bases ACACATGCGCCAAGCCACCCCAAATTGACTGATGCTCGGCCTGCAAACCAGCTTGTTTGAAGGCTTGCAGTACATGCCTG CCATCACCAAAACGTTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVVIDAHHSAQSALLILETLVGA ETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQGEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQL NQRRFYEWIGNVNTWDGVLPSYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ TEGGRDSATAILWQFDSTWAGINRDFR
Sequences:
>Translated_267_residues MTTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVVIDAHHSAQSALLILETLVGA ETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQGEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQL NQRRFYEWIGNVNTWDGVLPSYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ TEGGRDSATAILWQFDSTWAGINRDFR >Mature_266_residues TTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVVIDAHHSAQSALLILETLVGAE TQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQGEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQLN QRRFYEWIGNVNTWDGVLPSYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQT EGGRDSATAILWQFDSTWAGINRDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29921; Mature: 29790
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVV CCEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCEEEEEE IDAHHSAQSALLILETLVGAETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQ EECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC GEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQLNQRRFYEWIGNVNTWDGVLP CCCEEEEEEECCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ CCCCCCEEECCCCEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH TEGGRDSATAILWQFDSTWAGINRDFR CCCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TTYTWLGHDRPHLDTLFVQDLGAMVFASFGGVVAQGARKNEDAAAIFIDPAGGWELAVV CEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEECCCCEEEEEE IDAHHSAQSALLILETLVGAETQLRECLNQPLNQAFFSLDQALLDIFRSNRFRARCAAIQ EECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC GEASCLFVARKDEYVWYWAVGDCIGYIFHPSIARLGEMQLNQRRFYEWIGNVNTWDGVLP CCCEEEEEEECCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SYSTGIRLLQPGLTTIMLTTDGLLECGTRPFENPTTLYNAVCWEQHSLPRAARALLERVQ CCCCCCEEECCCCEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH TEGGRDSATAILWQFDSTWAGINRDFR CCCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA