Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900606

Identifier: 159900606

GI number: 159900606

Start: 5225601

End: 5226098

Strand: Reverse

Name: 159900606

Synonym: Haur_4093

Alternate gene names: NA

Gene position: 5226098-5225601 (Counterclockwise)

Preceding gene: 159900613

Following gene: 159900605

Centisome position: 82.35

GC content: 52.41

Gene sequence:

>498_bases
GTGTACTTTACACAAAACGATCCTCAGATTCTTTTCCCTTCGTGGGTAGCAGGTTTGTTGGTTATTTGGATTGCGGTTTT
AGTGGGTGCAATTTTTTGGCTGCGCTCGCTGCCACCCAAAAATCCGGCGCGTTTGGCGTTTCGCAAGCGCACCAGCAACG
GCCTGTTGATCATCGCCGGGATTGGGATCGTGCAGTTTCTGGCGCGTTGGCTGAAGATCGACGTAGTTGAGTGGCGCTTG
TGGGGCTATGTTTTATTTGTCGCATTGATTGGTTTCGGGCTGTATTCATGGCAATATGCTCGTTCAACCTTGCCTGCCTT
GGTTTCGCAAACTGGCAAAGTTAAATCCAATTATGCTAAGAGCCGCGCTGCTGCTGCCGGTAGCAATGCCAAGGCTAGTG
CTGATGGTGTCGCAAGCGAACCTGCTGCACCCCGCGAACCCAAGCCAATTGCAACCACTGGCCGTCGTGAAGCACGCCGC
TCCAAGAAACGCAAGTAA

Upstream 100 bases:

>100_bases
GCGTTTTTGGGCTTGTTAATGGCACATTGACGCTTTTTTCAGCGGGCTTTATAATGCTTAGCGCTTAATGCAACTTCACT
TCTTCGCAGGAGGCTGCTCG

Downstream 100 bases:

>100_bases
TTCGCTCAGTTGGTAACAATTAAACACTGGCTCTGCGTTGCAGGCTGGTGTTTTTGTTTTTTTAGGTTAGTTCCCTCACC
CCCTAGCCACCTCTCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAGIGIVQFLARWLKIDVVEWRL
WGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAKSRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARR
SKKRK

Sequences:

>Translated_165_residues
MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAGIGIVQFLARWLKIDVVEWRL
WGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAKSRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARR
SKKRK
>Mature_165_residues
MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAGIGIVQFLARWLKIDVVEWRL
WGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAKSRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARR
SKKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18269; Mature: 18269

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAG
CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCEEEEEH
IGIVQFLARWLKIDVVEWRLWGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARRSKKRK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MYFTQNDPQILFPSWVAGLLVIWIAVLVGAIFWLRSLPPKNPARLAFRKRTSNGLLIIAG
CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCEEEEEH
IGIVQFLARWLKIDVVEWRLWGYVLFVALIGFGLYSWQYARSTLPALVSQTGKVKSNYAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SRAAAAGSNAKASADGVASEPAAPREPKPIATTGRREARRSKKRK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA