| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900075
Identifier: 159900075
GI number: 159900075
Start: 4475096
End: 4475659
Strand: Reverse
Name: 159900075
Synonym: Haur_3558
Alternate gene names: NA
Gene position: 4475659-4475096 (Counterclockwise)
Preceding gene: 159900076
Following gene: 159900073
Centisome position: 70.52
GC content: 45.74
Gene sequence:
>564_bases ATGCGCTATTGGTGGTTGCTCATAGTGCTGATTGGCTGCATCCAAACCGATCAAACTCCACCCGCAGCCAATCAACTTAC AAGCTATCGTTTATATTTTTTTGAGCATAAAGTCCTTAGCCAACAGAAAGATGCCCATATTGCAGCCAATCAGGAGTGGA ATATCTTACGTGATCCCGACCTCTCACAAGCCAGCTATGTACTATCTGATAGCGCTATCGTTGAATATAATTGGCCGAAA CAGACCTTAGTGCTGCAAAACCCTTGGGCTGAAGGCAATCAAAAAACGCCACTTTGGATGTCAGAAGGCACAACCTTAGT TGTATTCAATGGACAGATTATTCGCGCCTATCAGCGAGAGCTAAGCATTACCAGCAAATATATTGCACCAGAAACTGCCG TGATGTATCACGAACTGCAAGCAAATGTGGGTGATACAACCAAGCTTAGCTATCGCTTGATGCAAACAGGCGCAACTTCG CCAGCTGCGATTGTCAGTGACGATGGAGCGATGGCCGAAGCCGTCAAGCAGCATTTTCGCCAGCTCGGTAAATTAGTTGA ATAA
Upstream 100 bases:
>100_bases GCCACAATCGCAATTTTTAGCAGCTGATCCGACTATCACCGAAGCCGTCAAGCAGCATTTGCGCGAAATTGGAAAGTTGG TTGAGTAAGGGATTCTGACC
Downstream 100 bases:
>100_bases GGGAAGTTCATGCCCTCACCTCAACCCCTCGCCCACTGAGCGGGAGTAACATTTATGATAGAGGATTTCCCCCTCGCCTC GCTGGGCGGGAGAGGGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPDLSQASYVLSDSAIVEYNWPK QTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRELSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATS PAAIVSDDGAMAEAVKQHFRQLGKLVE
Sequences:
>Translated_187_residues MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPDLSQASYVLSDSAIVEYNWPK QTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRELSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATS PAAIVSDDGAMAEAVKQHFRQLGKLVE >Mature_187_residues MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPDLSQASYVLSDSAIVEYNWPK QTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRELSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATS PAAIVSDDGAMAEAVKQHFRQLGKLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21250; Mature: 21250
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPD CHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHEEEHHHHHHCCCCCEEECCCCCCEECCCC LSQASYVLSDSAIVEYNWPKQTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRE CCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHH LSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATSPAAIVSDDGAMAEAVKQHFR HHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHHH QLGKLVE HHHHHCC >Mature Secondary Structure MRYWWLLIVLIGCIQTDQTPPAANQLTSYRLYFFEHKVLSQQKDAHIAANQEWNILRDPD CHHHHHHHHHHHHHCCCCCCCCCHHHHHEEHEEEHHHHHHCCCCCEEECCCCCCEECCCC LSQASYVLSDSAIVEYNWPKQTLVLQNPWAEGNQKTPLWMSEGTTLVVFNGQIIRAYQRE CCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHH LSITSKYIAPETAVMYHELQANVGDTTKLSYRLMQTGATSPAAIVSDDGAMAEAVKQHFR HHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHEECCCCCCCCEEEECCCHHHHHHHHHHH QLGKLVE HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA