Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899932

Identifier: 159899932

GI number: 159899932

Start: 4301306

End: 4302748

Strand: Reverse

Name: 159899932

Synonym: Haur_3415

Alternate gene names: NA

Gene position: 4302748-4301306 (Counterclockwise)

Preceding gene: 159899935

Following gene: 159899931

Centisome position: 67.8

GC content: 51.42

Gene sequence:

>1443_bases
ATGCCCGATGTAGCCCCTTTTCGTCAGTATCAACTCGAAACCGCTTACGATGAGTTGTTTCTTGGCCCAAACACGCCTCG
TCCACATTATCGGCTACTGTCGGAACGGCTGCGCGAGTTGCCGCCTGATGAGTTGGCTCGTCGCCAGCAAGCGGCGGATT
TGGCTTTTCTCAATCAAGGAATTACCTTTACAGTCTATGGTCGCGATGAAGGCACTGAGCGCATTTTCCCCTATGATTTG
CTGCCACGGCTGTTGACCGCCAAAGAGTGGGATACGATTGAGCGTGGGTTGGCGCAGCGGGTTACGGCATTAAATTTGTT
TTTGCGCGATATTTACCACGAGGAAACAATTTTAAAAGCCGGAGTTGTGCCGCGCGAATTGGTCTATAGCTGTCGCCATT
TTTCGCGCCAAATGCGGGGAGTTAGCGTGCCACGCGATCGCTATGTTTCGATCGTTGGCACCGATTTGATCCGTTTGCCA
AGCGGCCAATTTGCGGTACTAGAAGATAATTTGCGAGTTCCCAGTGGCGTGTCGTATATGCTGGCCAATCGTTTGGTGAT
GAAACGCGTGTTTCCACAGTTGTTTTCGAGCTATGGGGTGCGCTCGATCGACCATTATGGCCAAGCCTTGTTGGCAACCT
TGCGCTCGTTAGCGCCGCAAGGCCGCAGCGACCCAACGATTGTGCTGCTTACGCCTGGGGTTTTTAATTCAGCTTACTAC
GAACACACCTTTTTGGCCCGCCAGATGGGGGTTGAGCTGGTCGAAGGCCGCGATTTAATTGTTCACGATAATGTGGTGTA
TATGCGCACGACCGCTGGTTTGCGCCGCGTTGATGTGATTTATCGGCGAGTCGATGATGAATTTATTGATCCTTTAGCAT
TTCGGCCTGATTCAGTGCTGGGCGTGGCAGGCTTGTTGAATGCCTATCGGGCTGGCAATGTGGCTTTGGCCAATGCCTTG
GGCACAGGGGTAGCCGATGATAAAGCGATTTATGCCTATGTGCCAGCGATGATTAAATTCTATCTTGATGAAGACCCGAT
TTTGCCCAATGTCGAAACCTTTTTGCTCAGCGATGATCGTCAACGTCAGCATGTGCTGAATAACTTGGATTCATTGGTGG
TCAAGGCGGTCGGCGAATCGGGTGGCTACGATATGCTGATTGGGCCACATAGCACAATCGAGCAACGTAGCCAGTTTCGC
GATCGCATTATTGCCAACCCCCGCAACTACATTGCCCAACCAACCCTTGCGCTTTCCAAAGCTCCCTGTTTTATTGATGG
CAAACTCGAATCTCGCCACGTCGATTTACGTCCCTACATTTTGTTTGGCGATCAAATTAGCATTGTGCCTGGCGGCCTGA
CGCGGGTAGCCTTGCGGCGTGGCTCGTTGGTGGTCAATTCATCGCAAGGTGGCGGCAGCAAAGATACATGGGTTCTTTAT
TAA

Upstream 100 bases:

>100_bases
AATCTGTGGAGATCGGTACTATAGGCCATCTTCTTTCCCCCCAACGCGGCGATGTTGCCTCAAATCCCTTCAATGCTGAA
CAGACTGCAAGGAGCACGCT

Downstream 100 bases:

>100_bases
GGATGAAGTATGAGGGATGAGGGATGAAAAAGAGCATAGAACATAGAGTATAGGAGTTGGGGATTGGGGAGCACGATGCC
CTCACCCCCTAGCCCCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MPDVAPFRQYQLETAYDELFLGPNTPRPHYRLLSERLRELPPDELARRQQAADLAFLNQGITFTVYGRDEGTERIFPYDL
LPRLLTAKEWDTIERGLAQRVTALNLFLRDIYHEETILKAGVVPRELVYSCRHFSRQMRGVSVPRDRYVSIVGTDLIRLP
SGQFAVLEDNLRVPSGVSYMLANRLVMKRVFPQLFSSYGVRSIDHYGQALLATLRSLAPQGRSDPTIVLLTPGVFNSAYY
EHTFLARQMGVELVEGRDLIVHDNVVYMRTTAGLRRVDVIYRRVDDEFIDPLAFRPDSVLGVAGLLNAYRAGNVALANAL
GTGVADDKAIYAYVPAMIKFYLDEDPILPNVETFLLSDDRQRQHVLNNLDSLVVKAVGESGGYDMLIGPHSTIEQRSQFR
DRIIANPRNYIAQPTLALSKAPCFIDGKLESRHVDLRPYILFGDQISIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLY

Sequences:

>Translated_480_residues
MPDVAPFRQYQLETAYDELFLGPNTPRPHYRLLSERLRELPPDELARRQQAADLAFLNQGITFTVYGRDEGTERIFPYDL
LPRLLTAKEWDTIERGLAQRVTALNLFLRDIYHEETILKAGVVPRELVYSCRHFSRQMRGVSVPRDRYVSIVGTDLIRLP
SGQFAVLEDNLRVPSGVSYMLANRLVMKRVFPQLFSSYGVRSIDHYGQALLATLRSLAPQGRSDPTIVLLTPGVFNSAYY
EHTFLARQMGVELVEGRDLIVHDNVVYMRTTAGLRRVDVIYRRVDDEFIDPLAFRPDSVLGVAGLLNAYRAGNVALANAL
GTGVADDKAIYAYVPAMIKFYLDEDPILPNVETFLLSDDRQRQHVLNNLDSLVVKAVGESGGYDMLIGPHSTIEQRSQFR
DRIIANPRNYIAQPTLALSKAPCFIDGKLESRHVDLRPYILFGDQISIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLY
>Mature_479_residues
PDVAPFRQYQLETAYDELFLGPNTPRPHYRLLSERLRELPPDELARRQQAADLAFLNQGITFTVYGRDEGTERIFPYDLL
PRLLTAKEWDTIERGLAQRVTALNLFLRDIYHEETILKAGVVPRELVYSCRHFSRQMRGVSVPRDRYVSIVGTDLIRLPS
GQFAVLEDNLRVPSGVSYMLANRLVMKRVFPQLFSSYGVRSIDHYGQALLATLRSLAPQGRSDPTIVLLTPGVFNSAYYE
HTFLARQMGVELVEGRDLIVHDNVVYMRTTAGLRRVDVIYRRVDDEFIDPLAFRPDSVLGVAGLLNAYRAGNVALANALG
TGVADDKAIYAYVPAMIKFYLDEDPILPNVETFLLSDDRQRQHVLNNLDSLVVKAVGESGGYDMLIGPHSTIEQRSQFRD
RIIANPRNYIAQPTLALSKAPCFIDGKLESRHVDLRPYILFGDQISIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLY

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 54059; Mature: 53927

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDVAPFRQYQLETAYDELFLGPNTPRPHYRLLSERLRELPPDELARRQQAADLAFLNQG
CCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
ITFTVYGRDEGTERIFPYDLLPRLLTAKEWDTIERGLAQRVTALNLFLRDIYHEETILKA
CEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVVPRELVYSCRHFSRQMRGVSVPRDRYVSIVGTDLIRLPSGQFAVLEDNLRVPSGVSYM
CCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEECCCCCEEEEECCCCCCCCHHHH
LANRLVMKRVFPQLFSSYGVRSIDHYGQALLATLRSLAPQGRSDPTIVLLTPGVFNSAYY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
EHTFLARQMGVELVEGRDLIVHDNVVYMRTTAGLRRVDVIYRRVDDEFIDPLAFRPDSVL
HHHHHHHHHCCEEECCCEEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCHHH
GVAGLLNAYRAGNVALANALGTGVADDKAIYAYVPAMIKFYLDEDPILPNVETFLLSDDR
HHHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCH
QRQHVLNNLDSLVVKAVGESGGYDMLIGPHSTIEQRSQFRDRIIANPRNYIAQPTLALSK
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHCC
APCFIDGKLESRHVDLRPYILFGDQISIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLY
CCEEEECCCCCCEECCCEEEEECCEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCEEEC
>Mature Secondary Structure 
PDVAPFRQYQLETAYDELFLGPNTPRPHYRLLSERLRELPPDELARRQQAADLAFLNQG
CCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
ITFTVYGRDEGTERIFPYDLLPRLLTAKEWDTIERGLAQRVTALNLFLRDIYHEETILKA
CEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVVPRELVYSCRHFSRQMRGVSVPRDRYVSIVGTDLIRLPSGQFAVLEDNLRVPSGVSYM
CCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEECCCCCEEEEECCCCCCCCHHHH
LANRLVMKRVFPQLFSSYGVRSIDHYGQALLATLRSLAPQGRSDPTIVLLTPGVFNSAYY
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
EHTFLARQMGVELVEGRDLIVHDNVVYMRTTAGLRRVDVIYRRVDDEFIDPLAFRPDSVL
HHHHHHHHHCCEEECCCEEEEECCEEEEEECCCHHHHHHHHHHHCHHHCCCCCCCCCHHH
GVAGLLNAYRAGNVALANALGTGVADDKAIYAYVPAMIKFYLDEDPILPNVETFLLSDDR
HHHHHHHHHHCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCH
QRQHVLNNLDSLVVKAVGESGGYDMLIGPHSTIEQRSQFRDRIIANPRNYIAQPTLALSK
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHCC
APCFIDGKLESRHVDLRPYILFGDQISIVPGGLTRVALRRGSLVVNSSQGGGSKDTWVLY
CCEEEECCCCCCEECCCEEEEECCEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]