Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899931

Identifier: 159899931

GI number: 159899931

Start: 4300145

End: 4301089

Strand: Reverse

Name: 159899931

Synonym: Haur_3414

Alternate gene names: NA

Gene position: 4301089-4300145 (Counterclockwise)

Preceding gene: 159899932

Following gene: 159899930

Centisome position: 67.77

GC content: 49.63

Gene sequence:

>945_bases
ATGTTATCGCGGGTTGCTGATAGTTTATATTGGATTGGCCGCTACCTTGAGCGAACCGAGCATACCGCCCGTTTGCTTGA
TGTGAATTTATCGTTGATGCTCGACCAAACGCCGGCTGCTGCCGAACGTCGCTGGGAGCGCATGCAAACCTACTTGGCTT
GGAATTACGAGGGTATTCCCCAAACCTATGCGTTGGTGCAGGCCTTGACCTTTGATGTCAGCAATGCTAGCTCATTGGTC
AGTGGAATTGGCGCTGCCCGCGAGAATGCCCGCCAAGTGCGCGAACAAATTAGTTCGGAAATGTGGGAACAACTCAATCG
GGTCTATTTGCAGGTCAAGCGTACAACGATGGATCAGATGTGGCAGGAGCCACATGAATTTCTGCATAATGTGTTGAAAG
AGGGCATTCATCTGTTTCAAGGCATTACCACTGCGACCCTAAGCCATGGCGAATGCTGGCACTGGCTGCGTTTAGGCCAA
TTTATGGAGCGGGCCATGGCCACAGCGATTTTGCTTGATGTGCATTTTGCGGAAACTGGTGGCACGCCCGATGATCAAAC
CAATTATTTAGATTGGGTTGGGTTGCTAAAGTCCTGTACATCGTTCGAGGCCTATTGTAATGTATATACTGCTGATATTC
GGCCAGAACGAATTGCTGAATTTTTGTTGTTGAACGCTGAATCGCCGCGTTCGGTGCGTTTTGCCGCTGACCAAGTTGCG
GCCTCGATTCAAGCGATCGCCTCGAATACCCTTGGGCGACGCGGCGATCGAGTTAAGCGCTTGGCTGGGCGCTTACAAGC
AAGTCTTGATTATGGTCAAGTTGACGAGATTATGGCCGATGGCTTGAGCGGCTATTTAGCGACCATTCAACAACAATGCC
AACAAATTCATACCAACGTCTATCAGACCTTTATTAGTTATCCGGTGGAGACAGCATTGGTATAA

Upstream 100 bases:

>100_bases
GGGGGAACCGCTCTAGCAGTGCACCCCTCGCCCGCCGCCGTGGGAGAGGGGCTGGGGGTGAGGGCATCCATGGATCATCA
TTAAAAACTGGGGGCTGCTG

Downstream 100 bases:

>100_bases
GGATGATCATGACAGCAGCACAACAGCGCATGTTGGCGGCCTTAACAGGCTTATCGGTGGGCGAAGCCTATGGTCAACAG
CTTTGGCAGCAAGTTCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLSRVADSLYWIGRYLERTEHTARLLDVNLSLMLDQTPAAAERRWERMQTYLAWNYEGIPQTYALVQALTFDVSNASSLV
SGIGAARENARQVREQISSEMWEQLNRVYLQVKRTTMDQMWQEPHEFLHNVLKEGIHLFQGITTATLSHGECWHWLRLGQ
FMERAMATAILLDVHFAETGGTPDDQTNYLDWVGLLKSCTSFEAYCNVYTADIRPERIAEFLLLNAESPRSVRFAADQVA
ASIQAIASNTLGRRGDRVKRLAGRLQASLDYGQVDEIMADGLSGYLATIQQQCQQIHTNVYQTFISYPVETALV

Sequences:

>Translated_314_residues
MLSRVADSLYWIGRYLERTEHTARLLDVNLSLMLDQTPAAAERRWERMQTYLAWNYEGIPQTYALVQALTFDVSNASSLV
SGIGAARENARQVREQISSEMWEQLNRVYLQVKRTTMDQMWQEPHEFLHNVLKEGIHLFQGITTATLSHGECWHWLRLGQ
FMERAMATAILLDVHFAETGGTPDDQTNYLDWVGLLKSCTSFEAYCNVYTADIRPERIAEFLLLNAESPRSVRFAADQVA
ASIQAIASNTLGRRGDRVKRLAGRLQASLDYGQVDEIMADGLSGYLATIQQQCQQIHTNVYQTFISYPVETALV
>Mature_314_residues
MLSRVADSLYWIGRYLERTEHTARLLDVNLSLMLDQTPAAAERRWERMQTYLAWNYEGIPQTYALVQALTFDVSNASSLV
SGIGAARENARQVREQISSEMWEQLNRVYLQVKRTTMDQMWQEPHEFLHNVLKEGIHLFQGITTATLSHGECWHWLRLGQ
FMERAMATAILLDVHFAETGGTPDDQTNYLDWVGLLKSCTSFEAYCNVYTADIRPERIAEFLLLNAESPRSVRFAADQVA
ASIQAIASNTLGRRGDRVKRLAGRLQASLDYGQVDEIMADGLSGYLATIQQQCQQIHTNVYQTFISYPVETALV

Specific function: Unknown

COG id: COG2307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35734; Mature: 35734

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRVADSLYWIGRYLERTEHTARLLDVNLSLMLDQTPAAAERRWERMQTYLAWNYEGIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCC
QTYALVQALTFDVSNASSLVSGIGAARENARQVREQISSEMWEQLNRVYLQVKRTTMDQM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQEPHEFLHNVLKEGIHLFQGITTATLSHGECWHWLRLGQFMERAMATAILLDVHFAETG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTPDDQTNYLDWVGLLKSCTSFEAYCNVYTADIRPERIAEFLLLNAESPRSVRFAADQVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
ASIQAIASNTLGRRGDRVKRLAGRLQASLDYGQVDEIMADGLSGYLATIQQQCQQIHTNV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQTFISYPVETALV
HHHHHHCCHHHHCC
>Mature Secondary Structure
MLSRVADSLYWIGRYLERTEHTARLLDVNLSLMLDQTPAAAERRWERMQTYLAWNYEGIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCC
QTYALVQALTFDVSNASSLVSGIGAARENARQVREQISSEMWEQLNRVYLQVKRTTMDQM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQEPHEFLHNVLKEGIHLFQGITTATLSHGECWHWLRLGQFMERAMATAILLDVHFAETG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTPDDQTNYLDWVGLLKSCTSFEAYCNVYTADIRPERIAEFLLLNAESPRSVRFAADQVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH
ASIQAIASNTLGRRGDRVKRLAGRLQASLDYGQVDEIMADGLSGYLATIQQQCQQIHTNV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQTFISYPVETALV
HHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA