Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899757

Identifier: 159899757

GI number: 159899757

Start: 4100897

End: 4101256

Strand: Reverse

Name: 159899757

Synonym: Haur_3239

Alternate gene names: NA

Gene position: 4101256-4100897 (Counterclockwise)

Preceding gene: 159899758

Following gene: 159899756

Centisome position: 64.62

GC content: 47.5

Gene sequence:

>360_bases
ATGAAATTTGGTAAATTGTTGCGCTTCGGTATCATTGCTGGTGCAGGAGCCTTGGTTTATCGGGTTTATAAACAATATAA
GGCGGATCAAGCATTTGAGTTGGCTCCGGTCAGCAATTTAGGCTCAAACACCACCGCCGTCAGCGCCAGCAGCACCAAAC
GATCAATCAGCCCCGAGTTGCTGGAAATCTTGGCTTGCCCAGTCGATAAAAAACCAGTCGAATTGTATACCGATGCAAGC
GGCAAAGAATGGCTGCTCAACCCACGCAACGGTTATCGCTACCCAATTGAAGATGGGATTCCGATTATGTTGATCGATGA
AGGCGAAAAGCATAAAGATACCAGCCTGATTCGCGCCTAA

Upstream 100 bases:

>100_bases
GCATCGAAACCGCTGGCATCAAAGATCTAACCAAAATAACTCAATTTGTGAAAACCGCGCAGCAAGCCTTGGATGCGCTG
CGTGTTGCTAGGAGGAATTC

Downstream 100 bases:

>100_bases
TTTGTCCAGCGTGGAACCCTATTACGGAAGGGAAGCCCTCCGGGCTTCCTTTTGTTGTTACTTGGAGTCTGGATCATGCC
AAACCTCGCTGAACTTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPELLEILACPVDKKPVELYTDAS
GKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA

Sequences:

>Translated_119_residues
MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPELLEILACPVDKKPVELYTDAS
GKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA
>Mature_119_residues
MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPELLEILACPVDKKPVELYTDAS
GKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13131; Mature: 13131

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPEL
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCHHH
LEILACPVDKKPVELYTDASGKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA
HHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKFGKLLRFGIIAGAGALVYRVYKQYKADQAFELAPVSNLGSNTTAVSASSTKRSISPEL
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCHHH
LEILACPVDKKPVELYTDASGKEWLLNPRNGYRYPIEDGIPIMLIDEGEKHKDTSLIRA
HHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA