| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899505
Identifier: 159899505
GI number: 159899505
Start: 3771413
End: 3772438
Strand: Reverse
Name: 159899505
Synonym: Haur_2986
Alternate gene names: NA
Gene position: 3772438-3771413 (Counterclockwise)
Preceding gene: 159899506
Following gene: 159899504
Centisome position: 59.44
GC content: 42.5
Gene sequence:
>1026_bases ATGGATCTCAGTATTGTGCGTGAACGCCTGTTGCAGGTTGTTATTTCATTGACGGTCATCATTGGTGTATTTGGTTTAGC GTTTTTGGGCTTAGGAACTGTATTTTCGAATACAGTTCTTTTAATAGTTAGTAGCATTATGGGAGTAAATGCGCTCATCT GTGGTTTTATGTGGTATGGTTACGATAATTATAGTAACACCACAGTCGTCTGGTCGATTGGGGCAAGTTTACTGTTTTCA ACGATTATATTGGCTTTGATCCAGCCAATTTTATCAACTGGCTATATGTTTACGCCATTAATTGTAGCAATTACCGGGCT ACAATATATTTCTAATGAGCAAAAAGGTACGATTGTTGTTACGTCAATTAGTAGCAGTATTGTGGCTTTTTTTGCTGGTT TATTTAGCCCATTTAAAGAATATCAAGTCTTGTCATGGTTTGTCTATTTGAATGCAGCAGTGATTATCGGGATCTTTATT ATTATTGGCTTTTTGTTATGGCAATTCAATCAACGCTTGATTAGCATGATCGATTCGATTACGGAATCGAACGCTGCGTT GGCGCTCAAAAATGAGGTTTTGCTCTCAACCAACGGCGATTTGAAAAAGCAAATTGAGCTGGAAAAACAATTACGCGAGC AAATTGCTGATCTAGAAGTGCCAATTACTGAATTAGCCCACGACGTGATTTATGCCCCAATTGTTGGGCATCTCGATGAT CAACGGATCGATACCTTTCGCGAAGCCTTATTGAAACGGGTCCACGAGCAGCGTGCTCGCGCAGTGGTGCTTGATGTTAC TAGTATTGCCCATATCGATACCTATGGCTGCGGGTTGCTGACCCAAACGATTCAAACGGTCAAATTGTTGGGAACCCAAG TCGTGCTTTGTGGTATTTCGGCCTCGATGGCGATGATTTTGACCAACTTAGGCATTTCGTTTGGCGAAGATCTGCGGGTG GCTCGTAGCCCAAGCGATGCGATGCGCATGCTGGGTGTCGGCGAAAAGCAGTTGATGCTTGGCTAA
Upstream 100 bases:
>100_bases AGCTTGTATCGCTTTGTCGATGGTTTAGCTACCTGGATGCGAGCAAACCACGATTGGTCTACCATGACCTCTCGTTATCA GACATCTACCGAGGAATCCC
Downstream 100 bases:
>100_bases GTCTGCTTGTCGGTCGAATGATGAATCGCGGCTTCCCTCTTGCGATGGATTGCAAGAGGGTTTTTTGTGGTTAAATAGCC ATCATGCCGAGATGGATTTA
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS; PAS/PAC Sensor Protein; Sigma Activity Regulator; Positive Regulator Of Sigma-B; Sigma-B Regulator Rsbr; Anti-Anti Sigma Factor Protein; Anti-Anti-Sigma Regulatory Factor; Sugar Regulator; STAS Domain-Containing Protein; Protein Kinase
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYGYDNYSNTTVVWSIGASLLFS TIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVVTSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFI IIGFLLWQFNQRLISMIDSITESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGISASMAMILTNLGISFGEDLRV ARSPSDAMRMLGVGEKQLMLG
Sequences:
>Translated_341_residues MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYGYDNYSNTTVVWSIGASLLFS TIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVVTSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFI IIGFLLWQFNQRLISMIDSITESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGISASMAMILTNLGISFGEDLRV ARSPSDAMRMLGVGEKQLMLG >Mature_341_residues MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYGYDNYSNTTVVWSIGASLLFS TIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVVTSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFI IIGFLLWQFNQRLISMIDSITESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGISASMAMILTNLGISFGEDLRV ARSPSDAMRMLGVGEKQLMLG
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37418; Mature: 37418
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YDNYSNTTVVWSIGASLLFSTIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVV CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEE TSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFIIIGFLLWQFNQRLISMIDSI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD HCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGIS HHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASMAMILTNLGISFGEDLRVARSPSDAMRMLGVGEKQLMLG HHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHCCCCHHHCCC >Mature Secondary Structure MDLSIVRERLLQVVISLTVIIGVFGLAFLGLGTVFSNTVLLIVSSIMGVNALICGFMWYG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YDNYSNTTVVWSIGASLLFSTIILALIQPILSTGYMFTPLIVAITGLQYISNEQKGTIVV CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEE TSISSSIVAFFAGLFSPFKEYQVLSWFVYLNAAVIIGIFIIIGFLLWQFNQRLISMIDSI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TESNAALALKNEVLLSTNGDLKKQIELEKQLREQIADLEVPITELAHDVIYAPIVGHLDD HCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH QRIDTFREALLKRVHEQRARAVVLDVTSIAHIDTYGCGLLTQTIQTVKLLGTQVVLCGIS HHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASMAMILTNLGISFGEDLRVARSPSDAMRMLGVGEKQLMLG HHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA