Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898926

Identifier: 159898926

GI number: 159898926

Start: 3064638

End: 3066443

Strand: Reverse

Name: 159898926

Synonym: Haur_2405

Alternate gene names: NA

Gene position: 3066443-3064638 (Counterclockwise)

Preceding gene: 159898927

Following gene: 159898924

Centisome position: 48.32

GC content: 48.06

Gene sequence:

>1806_bases
ATGGGTTCTTTTGTCCGTGGATTGCTGGTTATGGTGAGTTTCGTGAGCCTGCTGGGTTTGATGTTGCCCGCCCAAGCAGC
GAGCCTGCAAACCACCTTTGTGGTAACAACGGCGGATGATGATTTTATTGCCGATAATGGCACATGTTCGTTGCGCGAGG
CGCTTTATGCCGCCAATACCAACCAAGCCTATGATGCATGCCCAGCTGGTGGGGCGAATGATACGATTCAGCTCGCGGCG
GCAAACTATCGTTTAACCCGTACTGGCATGAATGATGAGACTGGTGTGCTTGGCGATTTGGATATTTTGAGCGATTTAAC
GATTACTGGGGTGAGTTCGGCCACCACGATCATTGATGGCATGGAAAGTGATCGTGTGTTGGATATCTACACCGCAACCG
TTACCCTGAACAATCTACAAATTCGCAATGGTTTTGTGGATAACGATGATGAGCTTGGGCGCTATTACGGCCATGGCATT
TTGCAACGCTATGGCAATCTGCAGATTCAATCGAGTTTGATTGAACGCAATGGCTTGCTGCGTTCGACGATGCTGGCAAA
CAATTATGGTGGTGGCATTGCTAGCCTGAATGGAACCCTCAGCATCGTCGATAGTACCATTCGGAGTAATGCTTTACGCT
CATATGTTGATGGGTTTGATGAAGGTAGTGGTCATGGAGCCGGCTTATACATCAGTAGTCAAGCGGTTACTATTACCAAT
TCGCTTTTTGATAACAATCAGCGTGGTTTTGGGCCGGCGATTTATATGATCAAGGGCAATTTAAGTCTGCTGAATAGCGT
GATTCAACGTTCATCCGATAGTCATCAAACCTCGGCTGCGATCAATGTGCTGGGTGGGCAGCTAAGGATAACGGGTGGTG
GGTTGTTGAATAATACGCCACAGGGCTTGTCGCTGCGCGGAGCAAGTAGCGCCACGCTTGCTGATACCACCTTTGTTGGA
AATGGCTCTAGTGATCCGAATGCCCGTGAATGCTCGCGTGGTGGAGCAATTTATAACGCGGCAACGCTTTCGATTATGCA
TAGTCGCTTTATTGGTAATTATGCTGATCTCGGCGGAGCACTCTATCAGCATGCTGGGAAGGCAACGCTGCTTGATAGTG
AATGGGTTGAAAACCGTAGTAGTGGTGGTGTTCGGAATGATGAAGAGTGTTTTGGTTATGGTGGCGCAATCTACCAAAAT
TTAGGTGTGGTAACGCTTGACACCAGCACGATCGCCCATAATTACTCGTTTCATACTGGTAGCGGGATTGCCCAACTCCA
AGCGACCGCCATAATGACAATTACCAATTCAACGATTGTTTCTAATACCAATCGCTACTATGAATATGATCCGGAATATC
CAGATATGCGAACGGCGGGTCTCTATGCAACTGGCCGCATGAGCCTAGGCAATACAATTGTGGCCAATAACTATAATACA
AGTGTAGCTGATGCCTATGATTGTATGGGCACGGTTCTGAGTCTTGGCCATAACCTGTTGGAGCATCCCCGCCCGCAAGC
AATGTATCAATGTATCTTTCAAGCGCAAGCGAGTGATCAACTTAATCTTGACCCGATCCTCGATCAATTTGATTTTCATT
CGGGCACAACTCGGAGTTATAGCCTTAATCCGCTAAGTCCAGCGATTGATGCTGGTGCTGATTGTGGCCCGTTTGATCAG
CGCGGAATTCCCCGCCCACAAGATGGTGATGGCGATCTGCAAGCGGTTTGTGATATTGGCGCATTTGAATATAGTTTGCC
TGCGCCAACCCGTTTTATGCTGTTTGCACCCTACATTAGCCAATAG

Upstream 100 bases:

>100_bases
AACTCCACAAATGTGCCCAAAAAAGCCGAGCTTTTTAGATTGTGTTTATATCCACCATCGCCGATACTAGCCTTGCTGTT
ACTTTGGCTGTGGAGGGTTT

Downstream 100 bases:

>100_bases
TTAAACAATCAGGCGGGGATGTTTGATTCATCCCCGCCGAATGGGTTGCCTAAAACCGTTAAATTTAGGGCTTAGAGTTC
ATCACGTTCAAGCCATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Adhesin Like Proteiin

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MGSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANTNQAYDACPAGGANDTIQLAA
ANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDGMESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGI
LQRYGNLQIQSSLIERNGLLRSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN
SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTPQGLSLRGASSATLADTTFVG
NGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGALYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQN
LGVVTLDTSTIAHNYSFHTGSGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT
SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSYSLNPLSPAIDAGADCGPFDQ
RGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYISQ

Sequences:

>Translated_601_residues
MGSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANTNQAYDACPAGGANDTIQLAA
ANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDGMESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGI
LQRYGNLQIQSSLIERNGLLRSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN
SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTPQGLSLRGASSATLADTTFVG
NGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGALYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQN
LGVVTLDTSTIAHNYSFHTGSGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT
SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSYSLNPLSPAIDAGADCGPFDQ
RGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYISQ
>Mature_600_residues
GSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANTNQAYDACPAGGANDTIQLAAA
NYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDGMESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGIL
QRYGNLQIQSSLIERNGLLRSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITNS
LFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTPQGLSLRGASSATLADTTFVGN
GSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGALYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQNL
GVVTLDTSTIAHNYSFHTGSGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNTS
VADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSYSLNPLSPAIDAGADCGPFDQR
GIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYISQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64067; Mature: 63936

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEECCCCCHHHHHHHHHCCC
NQAYDACPAGGANDTIQLAAANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDG
CCCCCCCCCCCCCCEEEEEEECEEEEECCCCCCCCCEECHHHHHCCEEECCCCHHHHHCC
MESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGILQRYGNLQIQSSLIERNGLL
CCCCCEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCC
RSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN
HHHHHHCCCCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEH
SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTP
HHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHEEECCEEEEECCCCCCCCC
QGLSLRGASSATLADTTFVGNGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGA
CCCEECCCCCCEEEEEEEECCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHH
LYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQNLGVVTLDTSTIAHNYSFHTG
HHHHCCCEEEECHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCEEEEECHHHEECCCEECC
SGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT
CCHHEEEEEEEEEEECCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCC
SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSY
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEE
SLNPLSPAIDAGADCGPFDQRGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYIS
ECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCEEECCCCCCEEEEECCCCC
Q
C
>Mature Secondary Structure 
GSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANT
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEECCCCCHHHHHHHHHCCC
NQAYDACPAGGANDTIQLAAANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDG
CCCCCCCCCCCCCCEEEEEEECEEEEECCCCCCCCCEECHHHHHCCEEECCCCHHHHHCC
MESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGILQRYGNLQIQSSLIERNGLL
CCCCCEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCC
RSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN
HHHHHHCCCCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEH
SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTP
HHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHEEECCEEEEECCCCCCCCC
QGLSLRGASSATLADTTFVGNGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGA
CCCEECCCCCCEEEEEEEECCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHH
LYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQNLGVVTLDTSTIAHNYSFHTG
HHHHCCCEEEECHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCEEEEECHHHEECCCEECC
SGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT
CCHHEEEEEEEEEEECCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCC
SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSY
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEE
SLNPLSPAIDAGADCGPFDQRGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYIS
ECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCEEECCCCCCEEEEECCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA