| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898774
Identifier: 159898774
GI number: 159898774
Start: 2873917
End: 2875770
Strand: Direct
Name: 159898774
Synonym: Haur_2253
Alternate gene names: NA
Gene position: 2873917-2875770 (Clockwise)
Preceding gene: 159898765
Following gene: 159898776
Centisome position: 45.28
GC content: 52.8
Gene sequence:
>1854_bases ATGAAACCATTTACCAGAGCACTCATCACCAGTATGCTGGTGGCAATTTTAGCAGCCTGTGCAAATAGCCAAACGACGAG CAACAGCAACCCGACTTCGAGCAACAGTCAAGCGGTGGTCAGTGCAACGAGCGCGACAACGACCAGCCCAACCGTGGTCG TGCCAACCGTCGAATCAATCGATGAGGCACTAGCTACCAAAGCTACCCCCCACGATACCTCAGCAGATTTGGCTTGGGAT ACGGCGGAGTTGGTCGAAATTAAACTGAGTGATAGCACCATCACCGCCAGCAGCCCCAATGTCAAGGTTGAGGGCACGAC CGTCACAATTAGCGCCGCCGGAACCTACCAATTAAGTGGCAGTTTGAGCGATGGCCAAATTATCGTTGATACTACTGATA ACGATTTAGTGCGCTTAATCTTGAATGGTGTAACGATTCATAGCTCAACCAGTGCTCCCATCGCGATTATGCAAGCCGAA CAAGTGGCGGTAATTTTGGCCGATGGTAGCCAAAATACGCTTTCAGATACAATTGATGCCTCAGCCAATGCTACGACCGA AGAAGATTTGCCCAACGCCACGCTGTATAGCAAAGCCGATTTAGCGATTGATGGCACTGGCAGTCTGACGATTCAGGCCA ACGGCAACGACGGCATCACTGGCAAAGATGGCTTGGTGATCAACAGTGGCACGATCGATATTAGCGCAGTTGATGACGGC TTGCGCGGCAAAGATTATCTGGTGGTCAACGGCGGCACAATCAGCATTAATGCTCAAGGCGACGGCCTAACCGCTGATAA CGAAGAAGATCCGACCAAAGGCTATATTTCGATCACAGGTGGTACATTCACGATCAACGCTGGCGGCGATGGCCTCAGTG CCGTCACCGATCTCTTGATCGACACTGGCGATTTGACGATTAGCGCTGGTGGCGGCAGTAGTGCTAGTGTGAGCGCCGAT GCTTCAGCCAAAGGCTTGAAAGCTGGCCAAAATTTAGTGATTGCCGATGGCACGATCACGATTGACGCTGCTGAAGATGC GCTGCATTCCGATAGCAATGTCACGATCAATGCTGGCACAATCAACCTCGCCGCAGGCGATGATGGTGTGCATGCCGATG CAAACCTCACAATCAACGGCGGCGATCTGGCAATTAGCACCTCGTATGAAGGCCTTGAAAGCGCCGTCATCACGATCAAC GATGGCGCAATTAGCCTTGTAGCCCAAGATGATGGGGTGAATGTGGCCGGTGGCGATGGTTCGAGTATGCAGGGTGGCGG CATGGGTCGGCCCAATCGCAACGATAGCTTTGCCGCTGGCACCTACTTCTTGTATATCAACGGCGGTACATTGGTGGTCA ATGCTGCTGGCGACGGCTTAGATGCCAATGGTTCGATTGAGATGAACGGTGGTTTGGTGTTAGTTCACGGCCCAACCGAG CAAATGAACGGCGCATTGGATTATGATGGTGGTTTCGCGTTGAATGGTGGGATTTTAGTTGCTACTGGCAGCGCGGGCAT GGCCCAAGCACCCGACACCAGTTCAACTCAAGCCTCAGTGCTGATCAACTATAGCTCGGCTCAGGCTGCTGGCAACTTGG TGCAAATTCTTGATCAATCAGGCAAGGCGATTGTGAGCTTTACGCCCAGCAAACAATACCAAACCTTGGTCTTCTCATCG CCAGAGCTGCAACAAGGCGCAAGCTACACAATCAATAGCGGTGGCTCACTGCAAACGCACTCGGCCAGTGGCCTCTCGTC GGAAACAGCCAATGCAGGCGGCACAGCTTACGCCAGCTTCAGCGTCAGCGATATCGTGACCCAAGTTGGCCAACGCATGG GACGACAACGCTAA
Upstream 100 bases:
>100_bases AGCCCCCTCTCACACAAGTGAGCGAGGGGGAAGGACTCAAACAACATCGTAATCAGGTAAGGGAATCGACTATGTTACAG ATTTTATTGGGAGCTTTCGC
Downstream 100 bases:
>100_bases AAGTCAAAGTCAAAAGGCAGAAGTCAAAAATCAAAAGAGTTACCAAGCGTAAAATTTAACGCAGTGGCACAGAGCAAGCA TATTCTCTGCGCCGCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESIDEALATKATPHDTSADLAWD TAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSGSLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAE QVAVILADGSQNTLSDTIDASANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLIDTGDLTISAGGGSSASVSAD ASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITIN DGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSS PELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQRMGRQR
Sequences:
>Translated_617_residues MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESIDEALATKATPHDTSADLAWD TAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSGSLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAE QVAVILADGSQNTLSDTIDASANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLIDTGDLTISAGGGSSASVSAD ASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITIN DGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSS PELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQRMGRQR >Mature_617_residues MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESIDEALATKATPHDTSADLAWD TAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSGSLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAE QVAVILADGSQNTLSDTIDASANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLIDTGDLTISAGGGSSASVSAD ASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITIN DGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSS PELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQRMGRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61715; Mature: 61715
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECHHHH DEALATKATPHDTSADLAWDTAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSG HHHHHCCCCCCCCCCCEEECCEEEEEEEECCCEEECCCCCEEEEEEEEEEEECCEEEEEC SLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAEQVAVILADGSQNTLSDTIDA CCCCCEEEEECCCCCEEEEEEECEEEECCCCCCEEEEEECEEEEEEECCCCCCHHHHCCC SANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG CCCCCCHHCCCCCEEEECCCEEEECCCEEEEEECCCCCCCCCCCEEEECCEEEEEECCCC LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLI CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHE DTGDLTISAGGGSSASVSADASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGT ECCCEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCEEEEECCHHHHCCCCCEEEECCE INLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITINDGAISLVAQDDGVNVAGGDG EEEEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEECCCC SSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE CCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEECCCEEEEECCHH QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQS HHCCEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHEECCCC GKAIVSFTPSKQYQTLVFSSPELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASF CCEEEEECCCCCEEEEEECCCCHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCEEEEEE SVSDIVTQVGQRMGRQR EHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECHHHH DEALATKATPHDTSADLAWDTAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSG HHHHHCCCCCCCCCCCEEECCEEEEEEEECCCEEECCCCCEEEEEEEEEEEECCEEEEEC SLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAEQVAVILADGSQNTLSDTIDA CCCCCEEEEECCCCCEEEEEEECEEEECCCCCCEEEEEECEEEEEEECCCCCCHHHHCCC SANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG CCCCCCHHCCCCCEEEECCCEEEECCCEEEEEECCCCCCCCCCCEEEECCEEEEEECCCC LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLI CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHE DTGDLTISAGGGSSASVSADASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGT ECCCEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCEEEEECCHHHHCCCCCEEEECCE INLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITINDGAISLVAQDDGVNVAGGDG EEEEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEECCCC SSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE CCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEECCCEEEEECCHH QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQS HHCCEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHEECCCC GKAIVSFTPSKQYQTLVFSSPELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASF CCEEEEECCCCCEEEEEECCCCHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCEEEEEE SVSDIVTQVGQRMGRQR EHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA