Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898122

Identifier: 159898122

GI number: 159898122

Start: 1853285

End: 1855312

Strand: Direct

Name: 159898122

Synonym: Haur_1598

Alternate gene names: NA

Gene position: 1853285-1855312 (Clockwise)

Preceding gene: 159898121

Following gene: 159898126

Centisome position: 29.2

GC content: 50.69

Gene sequence:

>2028_bases
ATGAAGCAACGTGTTGTTTGGTTCGCTGTGTTGCTGGTGGCCGTGCTTGGCGTGCCTTTTAGCGTTTGGGCTGCAACCCC
GCGTCAAACTCCGACCAAAGCACCGCTGGCCGTTCAAGCTACTGTGCGAGTTGTGGAATCGGTTCCCGTGGTGGCTCCGG
CGGTGGCAGTAACGGCAACTGCGGTTACCTGCGATCCGCTGACCACCCGCTCGTTATATGGCTGGTTCACCTCGAACACG
ACTGGCTCGGTTTACAATAGCTCATACACATGTGCATTTGAGGTAGGGATTGCCGCATACAGCATGTTTGATGATCGAAT
TGGCAACCAACAATTGTTTGACTACACCATGTATACCGTGGCTCCCCGTCAAACCATTAACTTGAATGTAAAAATTCCTG
ATTGCAAAGCCCAACTGGATATCTTCCGTGGGCCAGTCTTGCACTCGTTGGTTGGTCAGCGCTATGGCGAACGCTTGCTT
TCAACGCGCTTCCCCAACACAACCCTTTGTGCTCCACCAGTTGAAGAAGTGTGTAGCCAAGGCCAAATCAGCCGCTTGAG
TGGCGTGAGCAACAATCAATTGGTAACTGGAGTTTTGAATATTCAAGCTGAAGTTACTGGCGCTTTGCCCCAAAAAGTTG
AATTTGCTTTGACTGGTGCCCAAACCACCAACTATACCGATGTCAACTCGCCCTACTATTTCATGGGCAACAATGGTAGT
CAGCCCAATGGTTGGGATTCAAGCACCAAGCCCGAAGGCGATTATCGCTTGAGCGCAACCTATGTTGGTTTGTTTGGTGA
ATCATTAGCGATTCGCTGTGAGCCTGTGGCAGTCAATTTCAGCATTCGCCGCAGCACGCCAACCACCGAGCCAACCGCAA
CCAGCACACCGTTGCCAACGGCAACCAACACTCCAGTGCCAACCGCGACGAGTACGCCAACGGCCACTGCAACCAACACG
CCAGTGCCAACGGCAACCAACACTCCAGTGCCAACCGCGACGAGTACGCCAACGGCCACTGCAACCAACACGCCAGTGCC
AACGGCAACCAACACTCCAGTGCCAACCGCGACGAGTACGCCAACGGCTACTGCAACTAGCACACCGTTGCCAACGGCAA
CCAGCACACCGTTGCCAACGGCAACCAGCACACCGTTGCCAACCGCGACTAACACGCCAGTGCCAACAGCAACTAGTACT
CCAGTACCAACCAGTACTCCTGTGCCTGGTAACCAATGTGTACCACAAGGGTTAGGCACTGCTGGCGATTTCAATGTCTT
TACCTTTGGCAACATCACCCAAAGCAACACCGATATTGAAGGTCGGGTCGCTGCTGGTGGCAATATCAACTTCCAAAACT
TTGGGGTTGGCGTGCGCTTGACCAATTCAAATGGTACGCGCGACGACTTAGTTGCCGGCGGTTCGTTGACCTACACCAAC
GGTTCGGTTTACAACGGCAATGTGGTTTATGGCACGACTAAATCATTGAATGGCGTTAGCGTCTTGAATGGTACCGTTCG
CCAAGGCCAACCAATCAACTTTGCCAACGAGCAAACTTCATTGCGCAACCGTTCGCAAGCTTGGGGTGGCTTGAGTGCTA
ATGGCACGACGGTCTATGAATATGGTGCAGTCAAGTTGAGCGGAACCAATACAACCCTGAATATCTTCACGGTTGATGGT
GCTCAATTGAATAATGCTAATGGCTTGAACATCAACGTTCCAGCAAGTTCATCAGTCTTGATTAATATCACTGGCACGAA
CAATCGAATGCAAAATTTCGAAACCTTCTTGACAAATGTTGATCAAACCAAGATTGTCTACAACTTCTACCAAGCCACTA
GCTTTAGCCTCTCAGGGATTGGCATCAAAGGTACAATCTTGGCTCCATTTGCTGATGTAAGCTTTAGCAATGGCCAAATC
AACGGGACATTGATTGGTAACTCATTGATTGGTGGTGGCGAATCACACCATTATCCATTCAATGGTTGTTTGCCAGCAAT
TCCAGCTAACAAGTCAGTTGAACGCTAA

Upstream 100 bases:

>100_bases
TAATAAAAACAAATCTCCACCTTGATTAACGATACGGCTATATTATGATACATAGGTCATTGTTTTTGTAGTACTTGTAT
CTATTATTGAGGATGCTTTT

Downstream 100 bases:

>100_bases
TTTCTAAAACCAAAAGCAAAGGCCTTGGGAATTTCCCAAGGCCTTTTGTTCTTTAATCGTTCACATCACTGGCAATCGAG
CGCATCAGCCGCCAATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTATAVTCDPLTTRSLYGWFTSNT
TGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTVAPRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLL
STRFPNTTLCAPPVEEVCSQGQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS
QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPTATNTPVPTATSTPTATATNT
PVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATST
PVPTSTPVPGNQCVPQGLGTAGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN
GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYEYGAVKLSGTNTTLNIFTVDG
AQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNVDQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQI
NGTLIGNSLIGGGESHHYPFNGCLPAIPANKSVER

Sequences:

>Translated_675_residues
MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTATAVTCDPLTTRSLYGWFTSNT
TGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTVAPRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLL
STRFPNTTLCAPPVEEVCSQGQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS
QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPTATNTPVPTATSTPTATATNT
PVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATST
PVPTSTPVPGNQCVPQGLGTAGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN
GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYEYGAVKLSGTNTTLNIFTVDG
AQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNVDQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQI
NGTLIGNSLIGGGESHHYPFNGCLPAIPANKSVER
>Mature_675_residues
MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTATAVTCDPLTTRSLYGWFTSNT
TGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTVAPRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLL
STRFPNTTLCAPPVEEVCSQGQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS
QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPTATNTPVPTATSTPTATATNT
PVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATST
PVPTSTPVPGNQCVPQGLGTAGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN
GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYEYGAVKLSGTNTTLNIFTVDG
AQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNVDQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQI
NGTLIGNSLIGGGESHHYPFNGCLPAIPANKSVER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70733; Mature: 70733

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTAT
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEE
AVTCDPLTTRSLYGWFTSNTTGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTV
EEEECCCCCCEEEEEEECCCCCCEECCCEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEE
APRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLLSTRFPNTTLCAPPVEEVCSQ
CCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHCC
GQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS
CCCHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEECCCCEEEECCCCC
QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPT
CCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCC
ATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATSTPVPTSTPVPGNQCVPQGLGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN
CCCEEEEEECCEECCCCCCCEEEECCCCCCEEEECEEEEEECCCCCHHHEEECCEEEECC
GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYE
CCEEECCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE
YGAVKLSGTNTTLNIFTVDGAQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNV
ECEEEEECCCEEEEEEEECCCEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHCCC
DQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQINGTLIGNSLIGGGESHHYPF
CCCEEEEEEEECCEEEEECCCEEEEEEECEECCCCCCCEEEEEEEECCEECCCCCCCCCC
NGCLPAIPANKSVER
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTAT
CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEE
AVTCDPLTTRSLYGWFTSNTTGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTV
EEEECCCCCCEEEEEEECCCCCCEECCCEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEE
APRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLLSTRFPNTTLCAPPVEEVCSQ
CCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHCC
GQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS
CCCHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEECCCCEEEECCCCC
QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPT
CCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCC
ATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATST
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATSTPVPTSTPVPGNQCVPQGLGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN
CCCEEEEEECCEECCCCCCCEEEECCCCCCEEEECEEEEEECCCCCHHHEEECCEEEECC
GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYE
CCEEECCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE
YGAVKLSGTNTTLNIFTVDGAQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNV
ECEEEEECCCEEEEEEEECCCEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHCCC
DQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQINGTLIGNSLIGGGESHHYPF
CCCEEEEEEEECCEEEEECCCEEEEEEECEECCCCCCCEEEEEEEECCEECCCCCCCCCC
NGCLPAIPANKSVER
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA