| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is flp [H]
Identifier: 159898039
GI number: 159898039
Start: 1764576
End: 1766438
Strand: Direct
Name: flp [H]
Synonym: Haur_1514
Alternate gene names: 159898039
Gene position: 1764576-1766438 (Clockwise)
Preceding gene: 159898038
Following gene: 159898040
Centisome position: 27.8
GC content: 48.9
Gene sequence:
>1863_bases GTGCCGATTCCCACTAATTGGCAACTTGAGGAACAAGCTGGTATTGTGCGGCTGAACGATCCCGATCAAAAAATTACGAT TGCCCTGCTGAGTGTTGAAGAAGCCGATTTGGCCAAGGCGATTGAATTAGGCTGGCAGCAAGCCGACCCAAGTTTTACGC TTACCCCCGATGATAGCCAAGAAATGCCAGCGCCAAATGGTGTGGAAAAAGCCTTAGTTGCGGCATATGACACCAAGAAC ACGGCTCAAACGACGATTGCCTTGGCCCAATTACATGAAGGCATGGCGTATTTGATGCTGGTGCAAGGCGAAAATACCAC AATTGCCAAGCGTCAATCGCAAGTTGGCATTATTCAATCGGGCTTTACGATTTTGGCGCTCAATCAAACCACGCTTAGCG CTGATCAACGGGTCGATGTTGGGCCAGAACTGATCAGCGAATTAGAAAGCTTTATCCAAGCCGAACAAGCCGAATATAAA ATTCCTGGCGTGAGTGTGGCGATTGTCCAAGATGGTCAAATTGTCTATAGCAAGGGTTTTGGCGTGCGTGATGTTGTTTC GCAAGCCCCCATGGATGCTGATACCCAGATGATGATTGGCTCAACTGGCAAGAGCTTAACGACCTTATTAATGGCAACTT TGGTCGATCAAGGCAAGCTGGATTGGGATACCCCGGTTGTCGAGTTATTGCCCAATTTCAAGGTCAAAGATCCGGAAATT ACCAAGCAAATCACGGTGCGCCATTTGGTTTGTGCCTGTACTGGCGTGCCACGCCGTGATTATGAGATGATTTTCAATGC TGAGGATTTGGATGCCCAAGGCATTATCGCTTCGGTTGCTGATTTTGAGTTCTTTACCGATTTTGGCGAAGCTTTTCAAT ATAGCAATCAGATGGTGGCGATTGGCGGCTTTGCGGCAGCGGCGGCCAGTGGCGGCGAGCTAACGCAGCTTGATCAAACC TTTGCTCAAGCATTAACCGAACGGGTGCTCAAACCAATGGGTATGAACAGCACCACGCTTGATCAAGCAGCCGTTGAGGC CAGCCCTAACCATGCGCTGCCCCATGGCTTGGATTTGGTCAACGCAACCTACCAAACCTTGCCAATCAGCATGGAATTTG CGATCAAAGGAGTAGCTCCAGCAGGCGCAACCGAGTGGTCAACTGCCAACGATATGGGCAATTATCTGATTACCCTGCTC AATCATGGCATTACGCCTAGTGGTCAACGCTTAGTTTCCGACGAAAATTTAGCTGTGTTGTGGGAGCCGCAAATTGCCAT CGATGCTAAATCGAGCTATGGGCTTGGTTGGATGATCAGCGACTACCATGGCTTGGAATTTATTGCTCACGGCGGTACGA CCTTTGGTTTCTCATCAGAGTTTGCCTTTATTCCAGAGGCCAACATTGGGATTGTGGTGTTGACTAATGGCCAATACGCC AACCATATTGCTACAAGTATTAGCGACCGCTACTTTGAATTAGCCTTTGATCAGCCAAGCAAGGCTGCTGAAACCTCAGC CTACACTGCTCAAAGCATCGAACAATCGTTGGGCGAAATCGCCAAAAATATCGTGCCTGAGCTGGATTTGGCGAGCGTTG AGCCATTGTTGGGCAGCTATACCAATGCCGCCTTGGGTGATGTGAGTTTGCTACTCAGTGGCGAGGAATTGTGGCTGGAT ATTGGTGCAATTCAGACCCAATTCAAGCCAGTCTTGAACGAACAAGGCCAGCCAGATGGCTATCTCTCAGTAACGCCACC GTTTACTGGAATTCCCTTCAAAACCGGAGTTGATGCCAATAACCAACCAACCTTGACCATGGATCTTGGCAGCGAAACCT ATCTCTTTACCCGTAAACCATAA
Upstream 100 bases:
>100_bases CGAACCAACTGCTGCCACCACTGTCACCGCAGCGCCAACTAAGGCCAGCGCAGGTGTCGAAAGCAGTAGTATCTATACCA GCACGAGTCAATTATTCTCA
Downstream 100 bases:
>100_bases ACTAAGCCACAACCGCCCAGCTAGTAGCAGAAGCCTAGCTGGGCGATAATTGAGCTTCAGTGACCAAAATACCCTAAAAG AATTATTTACGCTTGTTTAC
Product: beta-lactamase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MPIPTNWQLEEQAGIVRLNDPDQKITIALLSVEEADLAKAIELGWQQADPSFTLTPDDSQEMPAPNGVEKALVAAYDTKN TAQTTIALAQLHEGMAYLMLVQGENTTIAKRQSQVGIIQSGFTILALNQTTLSADQRVDVGPELISELESFIQAEQAEYK IPGVSVAIVQDGQIVYSKGFGVRDVVSQAPMDADTQMMIGSTGKSLTTLLMATLVDQGKLDWDTPVVELLPNFKVKDPEI TKQITVRHLVCACTGVPRRDYEMIFNAEDLDAQGIIASVADFEFFTDFGEAFQYSNQMVAIGGFAAAAASGGELTQLDQT FAQALTERVLKPMGMNSTTLDQAAVEASPNHALPHGLDLVNATYQTLPISMEFAIKGVAPAGATEWSTANDMGNYLITLL NHGITPSGQRLVSDENLAVLWEPQIAIDAKSSYGLGWMISDYHGLEFIAHGGTTFGFSSEFAFIPEANIGIVVLTNGQYA NHIATSISDRYFELAFDQPSKAAETSAYTAQSIEQSLGEIAKNIVPELDLASVEPLLGSYTNAALGDVSLLLSGEELWLD IGAIQTQFKPVLNEQGQPDGYLSVTPPFTGIPFKTGVDANNQPTLTMDLGSETYLFTRKP
Sequences:
>Translated_620_residues MPIPTNWQLEEQAGIVRLNDPDQKITIALLSVEEADLAKAIELGWQQADPSFTLTPDDSQEMPAPNGVEKALVAAYDTKN TAQTTIALAQLHEGMAYLMLVQGENTTIAKRQSQVGIIQSGFTILALNQTTLSADQRVDVGPELISELESFIQAEQAEYK IPGVSVAIVQDGQIVYSKGFGVRDVVSQAPMDADTQMMIGSTGKSLTTLLMATLVDQGKLDWDTPVVELLPNFKVKDPEI TKQITVRHLVCACTGVPRRDYEMIFNAEDLDAQGIIASVADFEFFTDFGEAFQYSNQMVAIGGFAAAAASGGELTQLDQT FAQALTERVLKPMGMNSTTLDQAAVEASPNHALPHGLDLVNATYQTLPISMEFAIKGVAPAGATEWSTANDMGNYLITLL NHGITPSGQRLVSDENLAVLWEPQIAIDAKSSYGLGWMISDYHGLEFIAHGGTTFGFSSEFAFIPEANIGIVVLTNGQYA NHIATSISDRYFELAFDQPSKAAETSAYTAQSIEQSLGEIAKNIVPELDLASVEPLLGSYTNAALGDVSLLLSGEELWLD IGAIQTQFKPVLNEQGQPDGYLSVTPPFTGIPFKTGVDANNQPTLTMDLGSETYLFTRKP >Mature_619_residues PIPTNWQLEEQAGIVRLNDPDQKITIALLSVEEADLAKAIELGWQQADPSFTLTPDDSQEMPAPNGVEKALVAAYDTKNT AQTTIALAQLHEGMAYLMLVQGENTTIAKRQSQVGIIQSGFTILALNQTTLSADQRVDVGPELISELESFIQAEQAEYKI PGVSVAIVQDGQIVYSKGFGVRDVVSQAPMDADTQMMIGSTGKSLTTLLMATLVDQGKLDWDTPVVELLPNFKVKDPEIT KQITVRHLVCACTGVPRRDYEMIFNAEDLDAQGIIASVADFEFFTDFGEAFQYSNQMVAIGGFAAAAASGGELTQLDQTF AQALTERVLKPMGMNSTTLDQAAVEASPNHALPHGLDLVNATYQTLPISMEFAIKGVAPAGATEWSTANDMGNYLITLLN HGITPSGQRLVSDENLAVLWEPQIAIDAKSSYGLGWMISDYHGLEFIAHGGTTFGFSSEFAFIPEANIGIVVLTNGQYAN HIATSISDRYFELAFDQPSKAAETSAYTAQSIEQSLGEIAKNIVPELDLASVEPLLGSYTNAALGDVSLLLSGEELWLDI GAIQTQFKPVLNEQGQPDGYLSVTPPFTGIPFKTGVDANNQPTLTMDLGSETYLFTRKP
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI26051233, Length=102, Percent_Identity=40.1960784313725, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI26051231, Length=102, Percent_Identity=40.1960784313725, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 66851; Mature: 66720
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPTNWQLEEQAGIVRLNDPDQKITIALLSVEEADLAKAIELGWQQADPSFTLTPDDSQ CCCCCCCEEHHCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCC EMPAPNGVEKALVAAYDTKNTAQTTIALAQLHEGMAYLMLVQGENTTIAKRQSQVGIIQS CCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCCEEEHHHCCCEEEEC GFTILALNQTTLSADQRVDVGPELISELESFIQAEQAEYKIPGVSVAIVQDGQIVYSKGF CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCEEEEEEECCEEEEECCC GVRDVVSQAPMDADTQMMIGSTGKSLTTLLMATLVDQGKLDWDTPVVELLPNFKVKDPEI CHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHH TKQITVRHLVCACTGVPRRDYEMIFNAEDLDAQGIIASVADFEFFTDFGEAFQYSNQMVA HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE IGGFAAAAASGGELTQLDQTFAQALTERVLKPMGMNSTTLDQAAVEASPNHALPHGLDLV EECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHH NATYQTLPISMEFAIKGVAPAGATEWSTANDMGNYLITLLNHGITPSGQRLVSDENLAVL HCHHHHCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEE WEPQIAIDAKSSYGLGWMISDYHGLEFIAHGGTTFGFSSEFAFIPEANIGIVVLTNGQYA ECCCEEEECCCCCCEEEEEECCCCEEEEECCCCEECCCCCEEECCCCCEEEEEEECCCHH NHIATSISDRYFELAFDQPSKAAETSAYTAQSIEQSLGEIAKNIVPELDLASVEPLLGSY HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC TNAALGDVSLLLSGEELWLDIGAIQTQFKPVLNEQGQPDGYLSVTPPFTGIPFKTGVDAN CCCHHCCEEEEEECCHHEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC NQPTLTMDLGSETYLFTRKP CCCEEEEECCCCEEEEEECC >Mature Secondary Structure PIPTNWQLEEQAGIVRLNDPDQKITIALLSVEEADLAKAIELGWQQADPSFTLTPDDSQ CCCCCCEEHHCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCC EMPAPNGVEKALVAAYDTKNTAQTTIALAQLHEGMAYLMLVQGENTTIAKRQSQVGIIQS CCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCCEEEHHHCCCEEEEC GFTILALNQTTLSADQRVDVGPELISELESFIQAEQAEYKIPGVSVAIVQDGQIVYSKGF CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEECCCEEEEEEECCEEEEECCC GVRDVVSQAPMDADTQMMIGSTGKSLTTLLMATLVDQGKLDWDTPVVELLPNFKVKDPEI CHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHH TKQITVRHLVCACTGVPRRDYEMIFNAEDLDAQGIIASVADFEFFTDFGEAFQYSNQMVA HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE IGGFAAAAASGGELTQLDQTFAQALTERVLKPMGMNSTTLDQAAVEASPNHALPHGLDLV EECHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHH NATYQTLPISMEFAIKGVAPAGATEWSTANDMGNYLITLLNHGITPSGQRLVSDENLAVL HCHHHHCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEE WEPQIAIDAKSSYGLGWMISDYHGLEFIAHGGTTFGFSSEFAFIPEANIGIVVLTNGQYA ECCCEEEECCCCCCEEEEEECCCCEEEEECCCCEECCCCCEEECCCCCEEEEEEECCCHH NHIATSISDRYFELAFDQPSKAAETSAYTAQSIEQSLGEIAKNIVPELDLASVEPLLGSY HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC TNAALGDVSLLLSGEELWLDIGAIQTQFKPVLNEQGQPDGYLSVTPPFTGIPFKTGVDAN CCCHHCCEEEEEECCHHEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC NQPTLTMDLGSETYLFTRKP CCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA