Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898040

Identifier: 159898040

GI number: 159898040

Start: 1766952

End: 1768712

Strand: Direct

Name: 159898040

Synonym: Haur_1515

Alternate gene names: NA

Gene position: 1766952-1768712 (Clockwise)

Preceding gene: 159898039

Following gene: 159898041

Centisome position: 27.84

GC content: 50.71

Gene sequence:

>1761_bases
ATGGCTCTTTTTCTGGGGTTGTTGTTGGCCCAAGTTGGCGTAGCCGCACCGCAAAGTGCGGTTGTGGCAGGCGAATTACG
CGCCGACGCGACATTTAGCCACATTGGAGTCTCGTGGGCGATTAGCGGCGATACCAATCGCAATAGTACGCTAACCTTGG
AATATCGTTTGGTTGGTAGCTCAACTTGGCGAGCTGCTGCTCCAGCCATGCGAGCCAATCCTAGCACGATTGTTGAGGGC
GTAGCGCTCAATCGCAATTATCACGCCGCCAGCGCAATGTGGCTCAGCGATGGCGAAGAGTATGAATTACGGGCCACTTT
AACCGATCCCGATGGCGGTAACACAACCCGCACGATCACCAAACGTACCCGTAGCCTTGCCGATTTTGGCCCAACTGTGC
GCACACGCTTTGTGGTTCCTGGCAATGGCGGTGGTGATGGTACGCTCAATAATCCATATCAAGGCATCCAAACCGCAGTC
GATAATGCTGAACCAGGCGATACCTTCACCTTGGCAGCCGGAACCTATCAGCCCTTCCAGATTCTGGCCAGCGGCACGCA
AGCCCAACCAATTCGGATCAGCGGGCCGCTCAATCGCAAGGCGATTATTGATGGAGCCAATACGACCCGTGGTGTTGTCA
CGCTTGGCGAGAGCAATCAAACCCTTGGCTTTGTGATTTTGGAGAACTTGACGATTCAAAACGGTGCTTGGGGCATCGAT
GCCCAACATACGCACGATATTCTGATTAGCCGTAATGTGATTCGTGATGTTGGCTTTGGCATTTACAACCGTCGCCAAAC
CCATCAAGAATACAACCAAACCGTGATCGATAATGTGATTACTGGCCGCACGACCTGGCCAGGCACAGGCATTCCCAGCG
AGCGTGGCCTCGATTTACGTGGTACTGGCAATGTGGTGGCCTATAACAGCGTGATGAATTTTGGTGATTGTATCTCGGTG
CAGCCGTGGAATGCCCAAAGCAGCTATGGCCAAGATATTTACCATAACGAAGCGGCATTTTGTGTTGATGATGGAATTGA
GATCGATTATAACCAAGCTAATACGCGAGTTTGGAATAATCGGGTGACCAATGCTCGCACTGGGGTCAGCATTCAGCCAA
TTTATGGCGGGCCAGCTTACATGTTTCGCAATAACTTTTTTAATATTGCTGGTGCGCCCTTCAAATTGCACAATCAACCA
ACTGGCTTGTTTATCGCCCACAATAGCTCGGCACGAATCGGCAATGCGCTGAGTGATGATGGTCAGCAGTGGCGCAATAC
CATTATTCGCAATAATTTCATGCTTGGCACACGCTATGCCTTTGAGTTTATGACGATTGCCGACGAAGGCTTTCGCGATG
TCGATTACAACGGCTGGGGAACCAACCACGCCAGCGATTCGCCTTCAGCACCTGATTTTAAATGGAATAATGAACGTTAT
TTGCGGTTGAGCAATTTGCAACAAATTGGGGTTGAAACCCATGGCGTAACCGTGAGTTTCAATGATGTCTATAATGCCAC
GCTGCCAGCCTCGGTCGATGTGGCCTCGCCGATTGGCGAAGCCGATTTACGTTTGCAAAACAGCTCGGTGGCGATTAATA
AAGGTGCAGTAATTGCCAACCTCAATGATCCATTTGTCACCGATGGTCAGCCCGATTTAGGTGCGTTTGAATTGGGCAAG
CCGCTGCCGCACTATGGCCCACGCATCGATTATCAAATTCCAAGCAATATTCGGGTTTACCTGCCATTAGCTCGGCGTTA
A

Upstream 100 bases:

>100_bases
ACGTTGTTTTGTTTTAACTTCCGCAATTGCATGCTATAATCCTGCCCTTATTGCCTAACCATTATTAATTTTTAAGGAGG
CAGGCTTGAAATCTATTCTT

Downstream 100 bases:

>100_bases
TCTGACACAATAACGTCCTGATCTACGAAGAATCAGGGCATTTTTACTTTTTGAGGTCTACGTGATGCAAACACCATCGA
AACTGGCCTATATTCCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGSSTWRAAAPAMRANPSTIVEG
VALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTITKRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAV
DNAEPGDTFTLAAGTYQPFQILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID
AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLRGTGNVVAYNSVMNFGDCISV
QPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNNRVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQP
TGLFIAHNSSARIGNALSDDGQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY
LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIANLNDPFVTDGQPDLGAFELGK
PLPHYGPRIDYQIPSNIRVYLPLARR

Sequences:

>Translated_586_residues
MALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGSSTWRAAAPAMRANPSTIVEG
VALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTITKRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAV
DNAEPGDTFTLAAGTYQPFQILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID
AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLRGTGNVVAYNSVMNFGDCISV
QPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNNRVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQP
TGLFIAHNSSARIGNALSDDGQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY
LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIANLNDPFVTDGQPDLGAFELGK
PLPHYGPRIDYQIPSNIRVYLPLARR
>Mature_585_residues
ALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGSSTWRAAAPAMRANPSTIVEGV
ALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTITKRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAVD
NAEPGDTFTLAAGTYQPFQILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGIDA
QHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLRGTGNVVAYNSVMNFGDCISVQ
PWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNNRVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQPT
GLFIAHNSSARIGNALSDDGQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERYL
RLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIANLNDPFVTDGQPDLGAFELGKP
LPHYGPRIDYQIPSNIRVYLPLARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63807; Mature: 63675

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGS
CHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECEEEEEECCCCCCCCEEEEEEEEECC
STWRAAAPAMRANPSTIVEGVALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTIT
CCCHHCCCCCCCCCHHHEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHH
KRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAVDNAEPGDTFTLAAGTYQPFQ
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHH
ILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID
HEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCC
AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLR
CCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
GTGNVVAYNSVMNFGDCISVQPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNN
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCCEEEEECCCEEEECCCCCEEECC
RVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQPTGLFIAHNSSARIGNALSDD
CCCCCCCCCEEEEECCCCEEEEECCEEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCC
GQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY
HHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEE
LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIAN
EEECCHHHCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCEEEEE
LNDPFVTDGQPDLGAFELGKPLPHYGPRIDYQIPSNIRVYLPLARR
CCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
ALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECEEEEEECCCCCCCCEEEEEEEEECC
STWRAAAPAMRANPSTIVEGVALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTIT
CCCHHCCCCCCCCCHHHEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHH
KRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAVDNAEPGDTFTLAAGTYQPFQ
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHH
ILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID
HEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCC
AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLR
CCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
GTGNVVAYNSVMNFGDCISVQPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNN
CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCCEEEEECCCEEEECCCCCEEECC
RVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQPTGLFIAHNSSARIGNALSDD
CCCCCCCCCEEEEECCCCEEEEECCEEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCC
GQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY
HHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEE
LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIAN
EEECCHHHCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCEEEEE
LNDPFVTDGQPDLGAFELGKPLPHYGPRIDYQIPSNIRVYLPLARR
CCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA