Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897109

Identifier: 159897109

GI number: 159897109

Start: 668182

End: 668943

Strand: Reverse

Name: 159897109

Synonym: Haur_0580

Alternate gene names: NA

Gene position: 668943-668182 (Counterclockwise)

Preceding gene: 159897110

Following gene: 159897108

Centisome position: 10.54

GC content: 53.15

Gene sequence:

>762_bases
ATGCAACGTTTTCTTGGTTTTATGCTGATCGGTTTGCTATTGCTGGCTTGTGGTCAAACGACTGGGCAACAAATCGAATC
GGCGGCAAGTGTGGCCCAAGTAGCCCAAGCCGAGCCAACCGATGAGCCAACGGCCAAACCGACGCGCACGCCACGGCCAA
CTAACACACCTCGTCCAACCGCTAAGCCCAAGCCAACTCGCACGCCACGGCCAACCGCGACGGCCACGCCAATTCCTGAG
CCAGTTGTGCTGAGCGGCGTTGGCCAAACTGTGACTGATGCATTTATGCCACCCAGCGCAGTTAGCATTATTAAATTGAC
CCATACTGGGCGACGCAACTTTATCGTCAAAGCCTATAACGCTGAGGGCGATGAAAGCTATTTGGTCAACGAAATTGGGC
GTTATGCTGGTTCGCGAGTGTTGTATGGCGATAGCAGCAGCTTTTTGGAGATTGATGCCGATGGCGAGTGGACAGCCGAA
ATTGTGCCAATTGGCTTGGAAGCTACCGCCGCCGATGGCCTGAGCGGCACTGGTGATCTGGTCAGCGGCCTATTTATGCC
CAACCAAGAAGGGCCAATTCCATTCAATTTCACCCACAATGGCGATAGCAATTTTATCGTGCAAGTCACTTGCCAAGGCG
GTATGGATTACGCCCAAAACGAGATTGGCACAGTTGATGGCTCTGCGATTGTCAAATTCTCTGAAGGCCCATGCTTGTGG
GATGTGCAGGCCGATGGCGATTGGACAATTAGCCCCAAGTAA

Upstream 100 bases:

>100_bases
TAATCAATTTGTCTATCGTAACGATTAAATCCACATTTGTGCCCTAGGGTGTTGCTAAAGTAACTCCAACAATCAGTTGA
AGTATTGAAGGAGTTCATCG

Downstream 100 bases:

>100_bases
ACCAACAGCCCGCAGATCATGGTTTGATTTGCGGGCTAAGCTTTAATTTTGTTTAATCAAGCACGAAGGAATATATTCAG
CTCGATCATTGATAAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPTAKPKPTRTPRPTATATPIPE
PVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYNAEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAE
IVPIGLEATAADGLSGTGDLVSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW
DVQADGDWTISPK

Sequences:

>Translated_253_residues
MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPTAKPKPTRTPRPTATATPIPE
PVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYNAEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAE
IVPIGLEATAADGLSGTGDLVSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW
DVQADGDWTISPK
>Mature_253_residues
MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPTAKPKPTRTPRPTATATPIPE
PVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYNAEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAE
IVPIGLEATAADGLSGTGDLVSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW
DVQADGDWTISPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26858; Mature: 26858

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPT
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AKPKPTRTPRPTATATPIPEPVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYN
CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC
AEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAEIVPIGLEATAADGLSGTGDL
CCCCHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEEEEEEECCEEECCCCCCCCHHH
VSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW
HHHEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCCEEE
DVQADGDWTISPK
EEECCCCEEECCC
>Mature Secondary Structure
MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPT
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AKPKPTRTPRPTATATPIPEPVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYN
CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC
AEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAEIVPIGLEATAADGLSGTGDL
CCCCHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEEEEEEECCEEECCCCCCCCHHH
VSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW
HHHEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCCEEE
DVQADGDWTISPK
EEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA