| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
Click here to switch to the map view.
The map label for this gene is hisI [H]
Identifier: 159041968
GI number: 159041968
Start: 1480947
End: 1481333
Strand: Reverse
Name: hisI [H]
Synonym: Cmaq_1404
Alternate gene names: 159041968
Gene position: 1481333-1480947 (Counterclockwise)
Preceding gene: 159041969
Following gene: 159041963
Centisome position: 71.3
GC content: 45.22
Gene sequence:
>387_bases ATGCTGCCTAATGGTGTTAATGTACTTAAGTTAAGCCCAGAGGAGGCTTCTAAGATTGCTGAATCCCTACTGTATAGGCA TACTGATGGAACCGTCGTGGCCGTGGCCCAGGATTACTTAACTAAGGATGTGTTAATGGTTGCGAACATGAATAAGGAAG CCGTTTTCAAAACATTAACCACAGGAATGGTTCACTACTGGTCCCTAAGCCGTAGGAGGCTTTGGTTAAAGGGGGAGACA AGCGGCCACTACCAGTATTTAATTGATTACAGGATTGACTGCGATGGTGATGCATTACTGCTTAAGGTTTACCAAGTGGG TAACGCATGCCACCTAGGTACTAGGTCCTGTTTCGACGCCAGGTACGTGAATAGGATTCATTTATAG
Upstream 100 bases:
>100_bases GAAATTAGGCTTAAGTATTCTGAATGGCTTAGTTAATTTAGCTAGGAGGTGAATCATGGTTTCAATAATGTTTTAAAGCA GCCTTAATTAGGCTTCATTA
Downstream 100 bases:
>100_bases GCTAAATGCGTACCCTAATGCCTAACTCTGATAAGTAGGCTTTGAGTATCGAGATGTTTATTACACCCATGTGAAACACG CTTGCAGCCAATGCAGCATC
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH [H]
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MLPNGVNVLKLSPEEASKIAESLLYRHTDGTVVAVAQDYLTKDVLMVANMNKEAVFKTLTTGMVHYWSLSRRRLWLKGET SGHYQYLIDYRIDCDGDALLLKVYQVGNACHLGTRSCFDARYVNRIHL
Sequences:
>Translated_128_residues MLPNGVNVLKLSPEEASKIAESLLYRHTDGTVVAVAQDYLTKDVLMVANMNKEAVFKTLTTGMVHYWSLSRRRLWLKGET SGHYQYLIDYRIDCDGDALLLKVYQVGNACHLGTRSCFDARYVNRIHL >Mature_128_residues MLPNGVNVLKLSPEEASKIAESLLYRHTDGTVVAVAQDYLTKDVLMVANMNKEAVFKTLTTGMVHYWSLSRRRLWLKGET SGHYQYLIDYRIDCDGDALLLKVYQVGNACHLGTRSCFDARYVNRIHL
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=97, Percent_Identity=42.2680412371134, Blast_Score=89, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6319819, Length=116, Percent_Identity=36.2068965517241, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH [H]
EC number: =3.5.4.19 [H]
Molecular weight: Translated: 14567; Mature: 14567
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNGVNVLKLSPEEASKIAESLLYRHTDGTVVAVAQDYLTKDVLMVANMNKEAVFKTLT CCCCCCEEEEECHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHEEEEECCCHHHHHHHHH TGMVHYWSLSRRRLWLKGETSGHYQYLIDYRIDCDGDALLLKVYQVGNACHLGTRSCFDA HHHHHEEECCCCEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCHHHH RYVNRIHL HHHHEECC >Mature Secondary Structure MLPNGVNVLKLSPEEASKIAESLLYRHTDGTVVAVAQDYLTKDVLMVANMNKEAVFKTLT CCCCCCEEEEECHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHEEEEECCCHHHHHHHHH TGMVHYWSLSRRRLWLKGETSGHYQYLIDYRIDCDGDALLLKVYQVGNACHLGTRSCFDA HHHHHEEECCCCEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCHHHH RYVNRIHL HHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]