Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836589

GI number: 15836589

Start: 1210082

End: 1211173

Strand: Direct

Name: Not Available

Synonym: CPj1058

Alternate gene names: NA

Gene position: 1210082-1211173 (Clockwise)

Preceding gene: 15836588

Following gene: 15836590

Centisome position: 98.66

GC content: 41.85

Gene sequence:

>1092_bases
ATGAAATTATATCAGACCTTGCGAGGTATTGTTTTAGTAAGTACGGGATGCATATTCTTAGGAATGCACGGAGGATATGC
CGCTGAGGTTCCAGTGACTTCATCTGGGTATGAGAATCTTTTAGAATCTAAGGAACAGGATCCTTCAGGTCTAGCGATCC
ACGATCGCATTTTGTTTAAGGTAGATGAAGAGAATGTAGTGACTGCCTTAGATGTGATCCATAAATTAAACTTACTATTT
TATAATTCGTATCCTCATCTTATAGATTCTTTCCCTGCACGATCCCAGTACTATACTGCGATGTGGCCTGTGGTTCTTGA
ATCTGTGATTGATGAGTTTTTGATGGTGGCAGATGCCAAGGCAAAGAGAATCGCTACAGATCCCACCGCAGTGAATCAAG
AAATCGAAGAGATGTTCGGAAGAGATCTCTCTCCTTTGTATGCGCATTTTGAAATGAGTCCCAACGATATTTTTAATGTG
ATCGATCGCACTTTGACAGCACAAAGGGTGATGGGTATGATGGTGCGCTCTAAGGTAATGTTGAAGGTGACTCCAGGGAA
AATTCGAGAATATTACCGAAAGCTAGAAGAAGAAGCCTCTAGGAAAGTCATCTGGAAGTATCGTGTGTTGACGATTAAAG
CCAACACAGAATCCTTGGCTAGCCAGATTGCTGATAAAGTGCGTGCTCGTCTAAATGAAGCGAAAACCTGGGATAAAGAT
CGTTTAACTGCTCTTGTGATCTCTCAGGGAGGGCAACTCGTCTGCTCCGAAGAGTTTTCTCGAGAGAATAGTGAGCTCTC
CCAAAGCCATAAGCAAGAGCTGGACTTGATTGGCTATCCTAAAGAGCTCTGTGGGTTGCCTAAGGCACATAAGTCAGGAT
ATAAACTCTATATGTTGTTAGACAAAACCTCAGGTTCTATAGAGCCTTTAGATGTTATGGAGTCCAAGATCAAACAGCAT
CTTTTTGCTTTAGAAGCTGAGAGTGTAGAGAAACAATATAAAGACAGATTACGCAAGCGCTACGGCTATGATGCTTCTAT
GATTGCGAAACTTCTTTCTGAAGAAGCTCCACCTCTATTTTCCTTATTATAG

Upstream 100 bases:

>100_bases
TTCTTTTTAGGAAAGAAAACACCTTCTCTCAGTGGTCAAAATTACCACAATTCCTTATAGTAAGTCCCTGGGCAGGTCAA
AATCTATAGGGTAGGAAGTC

Downstream 100 bases:

>100_bases
GGGATTGAGTGACAAGAAGTTCTCCTGCACAACTCTCCCGGTTTCTTTCTGAAATTCAAAATAAGCCGAAGAAAAGCCTC
TCTCAAAATTTCTTAGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFKVDEENVVTALDVIHKLNLLF
YNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNV
IDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD
RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQH
LFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLFSLL

Sequences:

>Translated_363_residues
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFKVDEENVVTALDVIHKLNLLF
YNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNV
IDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD
RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQH
LFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLFSLL
>Mature_363_residues
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFKVDEENVVTALDVIHKLNLLF
YNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNV
IDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD
RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLLDKTSGSIEPLDVMESKIKQH
LFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLFSLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_1058/CT_355/TC_0634 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1058_CHLPN (Q9Z6K1)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   G72001
- PIR:   G86622
- RefSeq:   NP_225252.1
- RefSeq:   NP_301113.1
- RefSeq:   NP_445331.1
- RefSeq:   NP_877371.1
- ProteinModelPortal:   Q9Z6K1
- PHCI-2DPAGE:   Q9Z6K1
- GeneID:   1467779
- GeneID:   894709
- GeneID:   919825
- GeneID:   963120
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0792
- KEGG:   cpj:CPj1058
- KEGG:   cpn:CPn1058
- KEGG:   cpt:CpB1100
- TIGR:   CP_0792
- HOGENOM:   HBG414048
- OMA:   VIDEFLM
- ProtClustDB:   CLSK871331
- BioCyc:   CPNE115711:CP_0792-MONOMER
- BioCyc:   CPNE115713:CPN1058-MONOMER
- BioCyc:   CPNE138677:CPJ1058-MONOMER
- BioCyc:   CPNE182082:CPB1100-MONOMER
- InterPro:   IPR008880

Pfam domain/function: SSF109998 Trigger_fac_C_bac

EC number: NA

Molecular weight: Translated: 41333; Mature: 41333

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFK
CCHHHHHHHHHHEECCEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEEE
VDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAK
ECCCHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
AKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNVIDRTLTAQRVMGMMVRSKVM
HHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEE
LKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD
EEECCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH
RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLL
HHEEEEEECCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEEEE
DKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH
SLL
HCC
>Mature Secondary Structure
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSGLAIHDRILFK
CCHHHHHHHHHHEECCEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEEE
VDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTAMWPVVLESVIDEFLMVADAK
ECCCHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
AKRIATDPTAVNQEIEEMFGRDLSPLYAHFEMSPNDIFNVIDRTLTAQRVMGMMVRSKVM
HHHCCCCCHHHHHHHHHHHCCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEE
LKVTPGKIREYYRKLEEEASRKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKD
EEECCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHH
RLTALVISQGGQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLL
HHEEEEEECCCCEEECHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEEEE
DKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLRKRYGYDASMIAKLLSEEAPPLF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH
SLL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362