| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15836005
GI number: 15836005
Start: 549123
End: 550892
Strand: Reverse
Name: Not Available
Synonym: CPj0474
Alternate gene names: NA
Gene position: 550892-549123 (Counterclockwise)
Preceding gene: 15836006
Following gene: 15836004
Centisome position: 44.91
GC content: 45.08
Gene sequence:
>1770_bases ATGTCTACATCACCAATTAGCAACGATCCCCGATATTTGTCTTTGTCTAATGCAACTGAGAAAACTTCTCTTCTTGCAAA TAGCCGGAGTCTCTCGCCAGTACCAAATTCCCTAGTTCCTAGCAATCCTGAAGATACAGGATTGCGAAAAAGTATTTTCA CCCATTCCGTGACTTTATTTGCTGGCCTGGTTGTTTTGCTGGTAGCGGTTTCTGTTGTTGTTGTCGCTTTGACCGTCTTA GCTCCCGGAGTTCCTCAGGCTATTCTTCTTGGAATCGCCATTTCAGGCGTGGGTATTGGTGGATTTTCTATAATGAAGAG CTTGGTTTATATGGTCCGAGACTATATGTCCCCCAGGATGCAGGAGTCGAGCAGAATCAAAAGTGCTTTAGCTGTAGGGA CTGGATTTACTGTCATGGGTTTGGTCATGAAGGTGGGGGCGAATTTTGTTCCTGGAGGGTATGGGGGTCTCGTGGGTAGC TTGGGATCCAGTGCGTATTCCCGGGGAAGCCAAACCACATTAGCAAGCTTCAGTCATTATATTTATACTAAGTTTTTCCG TTCTGAAAAAGTTGCTAAAGGGGAGAAGCTTACAGAAGCAGAAACTATAAAAGAGGCGAAAAAATTACACTATATCACGT TGTCAATTGCCACTATTGGCGTTGGTCTTGCGGTTTTGGGGATTCTCCTTGCCATTGCAGGAACGGTATTGCTAGGAGGC GCTCCCGCAACGATTGCTATTATTTTAGCTCCCCCTTTAATTTCTATAGGGCTTACGACGGTTTTGCAAACGATACTCCA TAGTAGTATCGGAAAGTGGAGAGCCTTTCTGCTTACTCAAGAAAAAAAAGATCTTTTTGTAGACACCTCCCTGAAAGACA TTCGCTTAGAAAAATTGCCCCCCAGTGAGGTGGAAGAGAGTGAAACTTCCCAATCTGTGATAGAAGTTCCAGATTCAGAG GGGATTGCAGAGACGAGGATCTCTGCGGAAGAAATCGATACGAGGCTTTCCCTGACGACAAGACAGAAGGTCATCTTTGC TCTTGCGACACTCTTGCTCTTAGCAAGTATTGCTGCCTTCATAGTCACGGGATTTGGTGGATTGACAGTCATGCAAGTTC TCCTTGTTGCTTCTGTAGGATCGGCGGTTGCTTCTGTAACACTCCCTATGGTTTCCTCAGGATTTTCCTACGTCGCCTAC CAACTGAAAGCAAGATTGAATATCAGTAAATTACGTTGGAAAGAAGCAAAAAATAAAAAGCGGGTGCGCCAGTTCTTAAT TGAGTCTGGAGTGATTGCCTCGGATCGAGAATTTAACCAAATGTGGAAGACAGTCTACAAAAAACAGATTCAGAAGACTG ACGCTGCAATTCGTGAAGAGGTTCGCAATTTTGAGAAGGGTGGGGAAGTGAACAGCGCCCTTGTTGGTGGAATCTTACTT GGTGTAGGAACTGGGATCATGCTTCTTGCCCTGGTCCCTGCATTTGCTCCTATCGTTCCTGGTATTCTTGCTCTTGGAGG ATCGACGTTAGGAATCGCGGGATCGATTTTAATGAGGAAGTTTGTCAACTGGCTCTATGATGAGCTTGTGAAGCTCTATG AGCGTCGACGTAATCGCCGTGAGCTTCTCTATGGTCCTGAAAGTAAAATGCGCTCCATTGCTACGGATTTAGTTGTTGAG GCTCTTGCTGCTAGCCACGATCATCTATTTGATCTTGATGGTCCCGTAGATTTTATTGATGTGGATGTAGATATAGATGG AGCTGCTTAG
Upstream 100 bases:
>100_bases ATACTTTATTTGTAAATTGTTGTGGGATTGTTCTATTTTGTGGTGTAGTTGATATTAATAATTTATTTTATAATTAAAAA TAATTATTAGTATTTCTTTT
Downstream 100 bases:
>100_bases GCCAGGTCCTTGAATGTAAGATCCTCGAGCTTTGGGAGCTTGTCTGCCTTCTCTAATTTTATTTTCTCTTTTACATCTAG TAGTTTACTTAATTATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MSTSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLFAGLVVLLVAVSVVVVALTVL APGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRMQESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGS LGSSAYSRGSQTTLASFSHYIYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLPPSEVEESETSQSVIEVPDSE GIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAFIVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAY QLKARLNISKLRWKEAKNKKRVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRRELLYGPESKMRSIATDLVVE ALAASHDHLFDLDGPVDFIDVDVDIDGAA
Sequences:
>Translated_589_residues MSTSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLFAGLVVLLVAVSVVVVALTVL APGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRMQESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGS LGSSAYSRGSQTTLASFSHYIYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLPPSEVEESETSQSVIEVPDSE GIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAFIVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAY QLKARLNISKLRWKEAKNKKRVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRRELLYGPESKMRSIATDLVVE ALAASHDHLFDLDGPVDFIDVDVDIDGAA >Mature_588_residues STSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLFAGLVVLLVAVSVVVVALTVLA PGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRMQESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGSL GSSAYSRGSQTTLASFSHYIYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGGA PATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLPPSEVEESETSQSVIEVPDSEG IAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAFIVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAYQ LKARLNISKLRWKEAKNKKRVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILLG VGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRRELLYGPESKMRSIATDLVVEA LAASHDHLFDLDGPVDFIDVDVDIDGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63016; Mature: 62885
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLF CCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AGLVVLLVAVSVVVVALTVLAPGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRM HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH QESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGSLGSSAYSRGSQTTLASFSHY HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH IYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCC APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLP CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHEECCCC PSEVEESETSQSVIEVPDSEGIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAF CCHHHHHHHCCHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAYQLKARLNISKLRWKEAKNKK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH RVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ELLYGPESKMRSIATDLVVEALAASHDHLFDLDGPVDFIDVDVDIDGAA HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCC >Mature Secondary Structure STSPISNDPRYLSLSNATEKTSLLANSRSLSPVPNSLVPSNPEDTGLRKSIFTHSVTLF CCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH AGLVVLLVAVSVVVVALTVLAPGVPQAILLGIAISGVGIGGFSIMKSLVYMVRDYMSPRM HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHH QESSRIKSALAVGTGFTVMGLVMKVGANFVPGGYGGLVGSLGSSAYSRGSQTTLASFSHY HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH IYTKFFRSEKVAKGEKLTEAETIKEAKKLHYITLSIATIGVGLAVLGILLAIAGTVLLGG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCC APATIAIILAPPLISIGLTTVLQTILHSSIGKWRAFLLTQEKKDLFVDTSLKDIRLEKLP CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHEECCCC PSEVEESETSQSVIEVPDSEGIAETRISAEEIDTRLSLTTRQKVIFALATLLLLASIAAF CCHHHHHHHCCHHEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVTGFGGLTVMQVLLVASVGSAVASVTLPMVSSGFSYVAYQLKARLNISKLRWKEAKNKK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH RVRQFLIESGVIASDREFNQMWKTVYKKQIQKTDAAIREEVRNFEKGGEVNSALVGGILL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GVGTGIMLLALVPAFAPIVPGILALGGSTLGIAGSILMRKFVNWLYDELVKLYERRRNRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ELLYGPESKMRSIATDLVVEALAASHDHLFDLDGPVDFIDVDVDIDGAA HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA