| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835259
GI number: 15835259
Start: 770069
End: 771787
Strand: Reverse
Name: Not Available
Synonym: TC0644
Alternate gene names: NA
Gene position: 771787-770069 (Counterclockwise)
Preceding gene: 15835270
Following gene: 15835258
Centisome position: 71.93
GC content: 42.0
Gene sequence:
>1719_bases ATGGTTTCTAGGGTTCCCGGAAATAGTGAGCCTATTGATGTAAATGCTATTGGAGACCTTTCTTTAATACAAAATCAGGG ATCAAGCACCTATATACCAATGGTTTCGATTCCTGAAGAAGGTGTTTCGAAATCAGGGCAAGCACTAAAACATTCTGCAG GGCTAATCGCTGGTATTGTGGTGTTAGGCGTTGCGTTAGCTATTGTAGCTGTTGCTTTAACGATACTCGCTCCGGGAGCT CCTCAAGCTATAGTTTTAGCAATTGCCTTTGCTGGAATTTCTGTGGGAGGTGTTACTACACTTCGCAGTCTTATTAACGG AATAAAGGATTTAGTTGCTCCTCGAATGTCTGTTAAGCAGCGAGCAAAAAGTGCTGCTTTACTCGGAGCTGGATTAGCAG GTGCAGGCCTTGTATTGAAATTTGGATCTTCTTATATTCCAGGGGGATATGGAAGTACTATAGGAAAGTTTGGGGATATT TCTTATAGTAGAGGGAGTGGAGCTTTGTTCGCAGGGTTTGCGCACTATCTCTATGTGCGGTTTTTTCAATCCAAAAAGGC TGCATCAGGAGTTGACCTTACTCCAGAAGAAATGCTTGTTGAAGGGGCAAAAATTCGGAAGATCGCGAGATGTTTAGTCT TATTAGGGGCTGGATTTGCTTGCTTAGGCATTTCTTTAGCTGTTGTTGGGACTCTTGTGGCAACAGGGGGCGCAGCCGCA GCTCTTATAGTTTTTGCCCCTCCTTTGATTAGCTTAGGCATTTCTTTAGTTATCTCTAATATGTTGCATACGACTCTTGG TCAATGGAGAGTCTTTGCTAGAGCGCAACAAGAACAAGATTTGCTTGCAGAGACTAAATTAAAAAACATCGCTCAGGCGG ACTTTAGCCGTAAGGTAGAAGGAAAGGTGGAAGTGGATATTTCTGAAAGTGCCTTCACTTCCGCCTCTGTTGAACGTTTA TCCGATAAAGAGATCAATCAAGCACTGTCTCTAACAAAAAAACAGAAAAGAATACTTGCCTTGTCAGGATTATTATTGGT GGCAGGAATTACATGCACTGTATTAGCAGGCTTTGGCGGGTTCCCTGTTGTACAGGTTCTATTGCTCTCTTCCATAGGAG GAGCTATATCGTCATCAGCCGTTCCTATGGTTGCTTCTGGAGTTATTCATGCCGTGCATCAATTAAGGGCTAGATTGCAA ATTAGTTTGGCTCGAAGAAGGGAAGCTAGGCTGAAGGCTCGTATGATGAATGAAATGTTTGAGCAAGAAGGTCGTACCAT TTTACTTTCAAAAGAAGAAAAAGATGAGACATGGGAACGAGCTGGGAGATCCGTAATTGTACAAACCGAAAAAGCTATTC GCGAGCATGTGAATCAGGCGAATAAAGAGGAAAAGTTTCAGTCTATTATCGTTGCTACGATGATCCTTTTGTCTGGGTTA GCTATTTTGGCATTGACTCTAGTACCGGGATTAGCTCCTATAGCTGGAGGAGTTTTGGCGATAGGAGGAGTGCTTTTAGG AATTAGTATTACGATGTATCTTCAGAAATTGATTCATTGGTTACATCAACAGCTAGTTAAACTCTACAATCATGTTCAAC ATAGACAAAGTATCATTGTTCAAGGGTCAGAAGAATGTGATTTTGACGCAGAAGATATCATAGTCGATCTTGTGGCAGAT TCCTTTGAAATTGACGGAGATGCTTTCTTAGAAGCATAA
Upstream 100 bases:
>100_bases CTTGTTTGATATGATAAAAATGAGATGTGCTACTTTTTATTGTGAAAGGGATTTTATTTTGTTGTTATAATTAATCTTAA TTAAAAAGATTTTGTTTTTT
Downstream 100 bases:
>100_bases GGGCTATTTTTTTATTCATCTAAATCACGAAAAGATTTCTATATGTTTATTAGCTAACTAATGAAGTTAGCTGATTCATG TTCCTTTTCATCTTGGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIVVLGVALAIVAVALTILAPGA PQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQRAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDI SYSRGSGALFAGFAHYLYVRFFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVEGKVEVDISESAFTSASVERL SDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGGFPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQ ISLARRREARLKARMMNEMFEQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIVQGSEECDFDAEDIIVDLVAD SFEIDGDAFLEA
Sequences:
>Translated_572_residues MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIVVLGVALAIVAVALTILAPGA PQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQRAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDI SYSRGSGALFAGFAHYLYVRFFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVEGKVEVDISESAFTSASVERL SDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGGFPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQ ISLARRREARLKARMMNEMFEQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIVQGSEECDFDAEDIIVDLVAD SFEIDGDAFLEA >Mature_572_residues MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIVVLGVALAIVAVALTILAPGA PQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQRAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDI SYSRGSGALFAGFAHYLYVRFFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVEGKVEVDISESAFTSASVERL SDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGGFPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQ ISLARRREARLKARMMNEMFEQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIVQGSEECDFDAEDIIVDLVAD SFEIDGDAFLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60295; Mature: 60295
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIV CCCCCCCCCCCEEEECCCCHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHH VLGVALAIVAVALTILAPGAPQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDISYSRGSGALFAGFAHYLYVR HHHHHHHHHCCCHHCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHH FFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA HHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKVEVDISESAFTSASVERLSDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGG CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQISLARRREARLKARMMNEMF HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL HHCCCEEEEECCCCHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE QGSEECDFDAEDIIVDLVADSFEIDGDAFLEA ECCCCCCCCHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure MVSRVPGNSEPIDVNAIGDLSLIQNQGSSTYIPMVSIPEEGVSKSGQALKHSAGLIAGIV CCCCCCCCCCCEEEECCCCHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHH VLGVALAIVAVALTILAPGAPQAIVLAIAFAGISVGGVTTLRSLINGIKDLVAPRMSVKQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAKSAALLGAGLAGAGLVLKFGSSYIPGGYGSTIGKFGDISYSRGSGALFAGFAHYLYVR HHHHHHHHHCCCHHCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHH FFQSKKAASGVDLTPEEMLVEGAKIRKIARCLVLLGAGFACLGISLAVVGTLVATGGAAA HHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH ALIVFAPPLISLGISLVISNMLHTTLGQWRVFARAQQEQDLLAETKLKNIAQADFSRKVE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKVEVDISESAFTSASVERLSDKEINQALSLTKKQKRILALSGLLLVAGITCTVLAGFGG CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FPVVQVLLLSSIGGAISSSAVPMVASGVIHAVHQLRARLQISLARRREARLKARMMNEMF HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQEGRTILLSKEEKDETWERAGRSVIVQTEKAIREHVNQANKEEKFQSIIVATMILLSGL HHCCCEEEEECCCCHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AILALTLVPGLAPIAGGVLAIGGVLLGISITMYLQKLIHWLHQQLVKLYNHVQHRQSIIV HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE QGSEECDFDAEDIIVDLVADSFEIDGDAFLEA ECCCCCCCCHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA