Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is pknB [H]

Identifier: 158319042

GI number: 158319042

Start: 8959020

End: 8961212

Strand: Direct

Name: pknB [H]

Synonym: Franean1_7325

Alternate gene names: 158319042

Gene position: 8959020-8961212 (Clockwise)

Preceding gene: 158319041

Following gene: 158319043

Centisome position: 99.74

GC content: 72.91

Gene sequence:

>2193_bases
ATGCCAGGGCCGGACTCGTACACTGAACACGCTGTGCGCGGGCCCCGCCCAACGTCGCCGGTGAACCAGGCGCAGCACCC
AGCTCGTCGCGTTGGTCACACGATGCGTTCCGATGCGACGGAGGGTGTCCGGGATGTTCGTTCGCAGTGGCGGAACGCTG
GGCGGATCCCCTGCCCGGGTGAGGTGGGGCAACCCGCCGTCGGGTCGGCCGGCGGGTATGCGGACGACGGAGGCGCTGTG
GTCGACGGAAGCAACCGACCGCAGGGCGCGGACGTCGATAACGACGTGACCACCGACTCGCCGGGCGAGCGCCCGGCCAG
CACGGCCGTGCTGGCCGAATCCGTTCTCGACCGCCGCTACCGTCTCCTGGCGCCGCTGAACACCCGCGGCCCGGTGACCC
TGTGGCGGGGTGACGACAACACGCTCGCCCGGCCGGTGGCCGTCCGGATCGTCGAGCACGTCGACCCCGGCACCGACCCC
GACGCCGCGGCGGAGATCGATCCGGCTGTCCGGGAGGACGCGGCCCGCGCCCTGCTGAAGGCGGCGATCAACTCCGGGCG
GCTGGTACACCCGGGCGCCGCGTCGACCTACGACGCCACGACCACGACCACCGGCACGGCCCGTGTCTCCTATGTCGTCT
CGGAGTGGGTGGAGGGGCGCACCCTGCGCCAGCTCGCCACCAACGGGCCACTACGCCCCGAACAGGCCGGGGCCATCGTC
CTGGCGGCGGCGCGGGTCCTCTCCGCCGCGCACGACCGCGGCATCCACCACGGCGGGCTCAACCCCGGCGATGTGATCGT
CTCCGGCCACGGCACCGTGAAGGTCGTCGACCTGGAGATCGGCGGCGTCCTCGCGGGGCTGGACGGCGCGGCGACGGGCG
CGGAGCCCACCATCGGCTCCGACCCGGAGAAGGACGACGCACCCCCCTCGGCCGAGCTGGCGGACGTCCGGGCCCTCGGC
GGGCTGCTGTACGCCGGGCTGACCGGCACCTGGCCGCTGCTCGGCGAGCACGCGCTGCCGGCCGCCCCGACGAGCGACGG
CCGGCTGCGGACCCCCCGGCAGATCAACTCGGCCGTCCCGCGCGACCTCGACGCGATCACCCTGGCGACCCTCGGCGACG
AGCGGGCCGGCGCGCCGATCACGACCGCCGCCGAGCTGGTCTCGGAGCTCGAGGCGGTCAGCCCGGTCGACCAGGTCCTC
GACACCGGCCTGATGAGCCTCGGTGACGACGGCCCCGCGAGCACCGAGGCGATGTCGGTCGACGGCTACAACCCGGCCAC
GGACGACTACCCCGCCCCCTCCGACTACCCGGGGCAGGGCTACGCCGGCGGGAGCAGCTCCGGCGGCAACGGCTACGGCG
GCCGCGACGACTACGACCGCCGCGGCTACGACCAGACCTCCTACCTGGGCCGCGACGGCTACGACCAGACCTCCTACAAC
GAGCGCGGCTACGGCGGCCGGAGCGGTTACGACGACCGCGACCGGGGCGGCTACCCGTCGCAGCGCGAGGCGCCCGAGCA
GCGCCGGTACGACGACGACCGTTACCCGCCCGCCGGCGGGCACCGCCAGGGCGGTGGGTCGGGCGGGGCTGGCGGCGGCG
CCGTCCGCCGGGTCCTGCCCTGGGTGGCCCTGCTGGTGGTGATCGCCCTCGTCGCCGTCGTGGCGGTGATCGCCTTTCGC
CCGAAGGACGATGGTGGCGGCAACCCGGGCGGGGATACCGGCCCTTCCTCCATGGCCGTGGTGCCCTCCGGTAACCGGAT
TCCTTTCGGCTCGGTCACCTCGTTCGACCCGCCCCCGGCCGGTGACGGGGCGGAGAAGCCGGACCTCGTACCGCTCGCCA
CCGATGGGAACCCGGCCACCCAGTGGGCGACGGACGGATACCACAGCCCTCAGTTCGGCGGGCTGAAGAAGGGCGTGGGG
CTGCGCTTCGACTTCAACCAGCCGATAACCCCGAGCGAGGTTGTCGTCACCGTCGGGAGGGAAGGCCCGATCACCTTTGA
GCTGCGGGCCGGCGATTCGCTCTCGGACAACATCAACGACTACGCGGTCATCGGTGTACCGCAGCAGAACAAGACCGGCG
AGGTCCGCATCAGCATGCCGTCCGAGCAGCCGACTCATCGGTACTGGGTGCTGTGGCTGACCGAGCTTCCGTCCAACAAG
GGATCGATCGCGGAGATCGAGTTCCGGGGCTGA

Upstream 100 bases:

>100_bases
CCACTGATTTCGCGCGATCGCACGCCGGGTCTATGGCGTGTCCATAGGCGGATGGTTCGCCCCGGTGTGCCAAGCTGGCT
TGTCCGGAGACATCCGCGAG

Downstream 100 bases:

>100_bases
CCGGACGGAATCATGTGCGGCGGGTCGAGGTCGATGCGCGCCAGTCCCGGGTGGCAATCGCCCGTCCTGAGAAGTCGGTG
AACCCGCCCGCGGCGGCCAG

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 730; Mature: 729

Protein sequence:

>730_residues
MPGPDSYTEHAVRGPRPTSPVNQAQHPARRVGHTMRSDATEGVRDVRSQWRNAGRIPCPGEVGQPAVGSAGGYADDGGAV
VDGSNRPQGADVDNDVTTDSPGERPASTAVLAESVLDRRYRLLAPLNTRGPVTLWRGDDNTLARPVAVRIVEHVDPGTDP
DAAAEIDPAVREDAARALLKAAINSGRLVHPGAASTYDATTTTTGTARVSYVVSEWVEGRTLRQLATNGPLRPEQAGAIV
LAAARVLSAAHDRGIHHGGLNPGDVIVSGHGTVKVVDLEIGGVLAGLDGAATGAEPTIGSDPEKDDAPPSAELADVRALG
GLLYAGLTGTWPLLGEHALPAAPTSDGRLRTPRQINSAVPRDLDAITLATLGDERAGAPITTAAELVSELEAVSPVDQVL
DTGLMSLGDDGPASTEAMSVDGYNPATDDYPAPSDYPGQGYAGGSSSGGNGYGGRDDYDRRGYDQTSYLGRDGYDQTSYN
ERGYGGRSGYDDRDRGGYPSQREAPEQRRYDDDRYPPAGGHRQGGGSGGAGGGAVRRVLPWVALLVVIALVAVVAVIAFR
PKDDGGGNPGGDTGPSSMAVVPSGNRIPFGSVTSFDPPPAGDGAEKPDLVPLATDGNPATQWATDGYHSPQFGGLKKGVG
LRFDFNQPITPSEVVVTVGREGPITFELRAGDSLSDNINDYAVIGVPQQNKTGEVRISMPSEQPTHRYWVLWLTELPSNK
GSIAEIEFRG

Sequences:

>Translated_730_residues
MPGPDSYTEHAVRGPRPTSPVNQAQHPARRVGHTMRSDATEGVRDVRSQWRNAGRIPCPGEVGQPAVGSAGGYADDGGAV
VDGSNRPQGADVDNDVTTDSPGERPASTAVLAESVLDRRYRLLAPLNTRGPVTLWRGDDNTLARPVAVRIVEHVDPGTDP
DAAAEIDPAVREDAARALLKAAINSGRLVHPGAASTYDATTTTTGTARVSYVVSEWVEGRTLRQLATNGPLRPEQAGAIV
LAAARVLSAAHDRGIHHGGLNPGDVIVSGHGTVKVVDLEIGGVLAGLDGAATGAEPTIGSDPEKDDAPPSAELADVRALG
GLLYAGLTGTWPLLGEHALPAAPTSDGRLRTPRQINSAVPRDLDAITLATLGDERAGAPITTAAELVSELEAVSPVDQVL
DTGLMSLGDDGPASTEAMSVDGYNPATDDYPAPSDYPGQGYAGGSSSGGNGYGGRDDYDRRGYDQTSYLGRDGYDQTSYN
ERGYGGRSGYDDRDRGGYPSQREAPEQRRYDDDRYPPAGGHRQGGGSGGAGGGAVRRVLPWVALLVVIALVAVVAVIAFR
PKDDGGGNPGGDTGPSSMAVVPSGNRIPFGSVTSFDPPPAGDGAEKPDLVPLATDGNPATQWATDGYHSPQFGGLKKGVG
LRFDFNQPITPSEVVVTVGREGPITFELRAGDSLSDNINDYAVIGVPQQNKTGEVRISMPSEQPTHRYWVLWLTELPSNK
GSIAEIEFRG
>Mature_729_residues
PGPDSYTEHAVRGPRPTSPVNQAQHPARRVGHTMRSDATEGVRDVRSQWRNAGRIPCPGEVGQPAVGSAGGYADDGGAVV
DGSNRPQGADVDNDVTTDSPGERPASTAVLAESVLDRRYRLLAPLNTRGPVTLWRGDDNTLARPVAVRIVEHVDPGTDPD
AAAEIDPAVREDAARALLKAAINSGRLVHPGAASTYDATTTTTGTARVSYVVSEWVEGRTLRQLATNGPLRPEQAGAIVL
AAARVLSAAHDRGIHHGGLNPGDVIVSGHGTVKVVDLEIGGVLAGLDGAATGAEPTIGSDPEKDDAPPSAELADVRALGG
LLYAGLTGTWPLLGEHALPAAPTSDGRLRTPRQINSAVPRDLDAITLATLGDERAGAPITTAAELVSELEAVSPVDQVLD
TGLMSLGDDGPASTEAMSVDGYNPATDDYPAPSDYPGQGYAGGSSSGGNGYGGRDDYDRRGYDQTSYLGRDGYDQTSYNE
RGYGGRSGYDDRDRGGYPSQREAPEQRRYDDDRYPPAGGHRQGGGSGGAGGGAVRRVLPWVALLVVIALVAVVAVIAFRP
KDDGGGNPGGDTGPSSMAVVPSGNRIPFGSVTSFDPPPAGDGAEKPDLVPLATDGNPATQWATDGYHSPQFGGLKKGVGL
RFDFNQPITPSEVVVTVGREGPITFELRAGDSLSDNINDYAVIGVPQQNKTGEVRISMPSEQPTHRYWVLWLTELPSNKG
SIAEIEFRG

Specific function: Unknown

COG id: COG0515

COG function: function code RTKL; Serine/threonine protein kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 protein kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR005543
- InterPro:   IPR000719
- InterPro:   IPR017441
- InterPro:   IPR017442
- InterPro:   IPR008271 [H]

Pfam domain/function: PF03793 PASTA; PF00069 Pkinase [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 76081; Mature: 75950

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50011 PROTEIN_KINASE_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGPDSYTEHAVRGPRPTSPVNQAQHPARRVGHTMRSDATEGVRDVRSQWRNAGRIPCPG
CCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EVGQPAVGSAGGYADDGGAVVDGSNRPQGADVDNDVTTDSPGERPASTAVLAESVLDRRY
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RLLAPLNTRGPVTLWRGDDNTLARPVAVRIVEHVDPGTDPDAAAEIDPAVREDAARALLK
HEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHH
AAINSGRLVHPGAASTYDATTTTTGTARVSYVVSEWVEGRTLRQLATNGPLRPEQAGAIV
HHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCHH
LAAARVLSAAHDRGIHHGGLNPGDVIVSGHGTVKVVDLEIGGVLAGLDGAATGAEPTIGS
HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEEEECCEEECCCCCCCCCCCCCCC
DPEKDDAPPSAELADVRALGGLLYAGLTGTWPLLGEHALPAAPTSDGRLRTPRQINSAVP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCC
RDLDAITLATLGDERAGAPITTAAELVSELEAVSPVDQVLDTGLMSLGDDGPASTEAMSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEE
DGYNPATDDYPAPSDYPGQGYAGGSSSGGNGYGGRDDYDRRGYDQTSYLGRDGYDQTSYN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCC
ERGYGGRSGYDDRDRGGYPSQREAPEQRRYDDDRYPPAGGHRQGGGSGGAGGGAVRRVLP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
WVALLVVIALVAVVAVIAFRPKDDGGGNPGGDTGPSSMAVVPSGNRIPFGSVTSFDPPPA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
GDGAEKPDLVPLATDGNPATQWATDGYHSPQFGGLKKGVGLRFDFNQPITPSEVVVTVGR
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCEEEEECC
EGPITFELRAGDSLSDNINDYAVIGVPQQNKTGEVRISMPSEQPTHRYWVLWLTELPSNK
CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCC
GSIAEIEFRG
CCEEEEEECC
>Mature Secondary Structure 
PGPDSYTEHAVRGPRPTSPVNQAQHPARRVGHTMRSDATEGVRDVRSQWRNAGRIPCPG
CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EVGQPAVGSAGGYADDGGAVVDGSNRPQGADVDNDVTTDSPGERPASTAVLAESVLDRRY
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RLLAPLNTRGPVTLWRGDDNTLARPVAVRIVEHVDPGTDPDAAAEIDPAVREDAARALLK
HEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHH
AAINSGRLVHPGAASTYDATTTTTGTARVSYVVSEWVEGRTLRQLATNGPLRPEQAGAIV
HHHCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCHH
LAAARVLSAAHDRGIHHGGLNPGDVIVSGHGTVKVVDLEIGGVLAGLDGAATGAEPTIGS
HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEEEECCEEECCCCCCCCCCCCCCC
DPEKDDAPPSAELADVRALGGLLYAGLTGTWPLLGEHALPAAPTSDGRLRTPRQINSAVP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCC
RDLDAITLATLGDERAGAPITTAAELVSELEAVSPVDQVLDTGLMSLGDDGPASTEAMSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEE
DGYNPATDDYPAPSDYPGQGYAGGSSSGGNGYGGRDDYDRRGYDQTSYLGRDGYDQTSYN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCC
ERGYGGRSGYDDRDRGGYPSQREAPEQRRYDDDRYPPAGGHRQGGGSGGAGGGAVRRVLP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
WVALLVVIALVAVVAVIAFRPKDDGGGNPGGDTGPSSMAVVPSGNRIPFGSVTSFDPPPA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
GDGAEKPDLVPLATDGNPATQWATDGYHSPQFGGLKKGVGLRFDFNQPITPSEVVVTVGR
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCEEEEECC
EGPITFELRAGDSLSDNINDYAVIGVPQQNKTGEVRISMPSEQPTHRYWVLWLTELPSNK
CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCC
GSIAEIEFRG
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]