Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is insG [H]

Identifier: 158317288

GI number: 158317288

Start: 6705062

End: 6706339

Strand: Reverse

Name: insG [H]

Synonym: Franean1_5536

Alternate gene names: 158317288

Gene position: 6706339-6705062 (Counterclockwise)

Preceding gene: 158317289

Following gene: 158317287

Centisome position: 74.66

GC content: 72.14

Gene sequence:

>1278_bases
GTGGCGGCGTGGCCTCGGTGCCGCTGGGTGGTTTGGTCACGGTTCGTGGCTTCGATGGTGACCCCGGACCAGGTGTCGGT
CGGGGTGCTGGTGACGGCGGTGCCGCGTGACGCGGTCGACGAGGCCGTCGCGGCCTGTGGGGTGGGTGCGCGGCGGGCGG
GCGGGAAGCTCCCACCGCATGTGACGGCGTACCTGACGTTGGCGATGTCCCTGTTTCCGGACGACGACTACGCCGAGGTC
GCCCAGAAGGTGACCGGGTCGCTGGACCGGTTCGGCTGCTGGGACGCGGCGTGGGCGCCGCCGAGCGCGAGCGGGATCAC
CCAGGCGCGTAAGCGGCTGGGCCGGATGGTGATGGCCGAGGTGTTCGAGCGGGTCGCGGGCCAGGTCGCGACACTGTCGA
CGCGTGGCGCGTGGCTGCGGGGCCGGTTGTTGCTCGCGATCGACGGGTTTGACGTCGACGTGCCCGACACCGAGGAGAAC
GCGGCCGAGTTCGGCTACGCCGGCACCGGGGAGAAGCGGTCGGCGTTCCCGAAGATCCGGGTCGTCGCGTTGGCGGAGTG
CGGGACGCACGCGTTCCGGGCCGCCGAGGTCGGTGGCTGGGCGGCTGGGGAGAGGACGCTGGCCCGCGGGCTGCTGATGC
GGCTGAACCGCGACGAGGTGCTGACCGCCGACCGTGGGTTCTACTCGTTCGACAACTGGGCGCTGGCCGCGGGCACCGGC
GCCGACCTGATCTGGCGGGCCCCGACCGGGCTGAACCTGCCGGTCGTGCGGGTCCTGTCCGATGGCACGTTCCTCACCGT
CCTGATCAACCCGGAGATCACGGGAGGTCGGCGCCGCGAGCGGCTGCTCGCCGCCGCGAAGGCCGGCGACGAGCTTGATC
CGGACGAGGCGCACCTGGCCCGGGTCGTCGAGTACGACATCCCCGACCGGGCCGGTAACGGTACCGGCGAACTGGTCGTC
GTGCTGACCACGATCCTCGACCCGCGTCAGGCCCGTGCCGACGAGGTCGCCGCCGGATACAACGAGCGCTGGGAGGAGGA
AACCGCGAACGACCAGCTCAAGACCCATCTACGCGGCCCCGGGAGAGTCCTGCGCTCCCGGCTGCCGGACCTGGCGGTCC
AGGAGATGTGGGCCTGGCTGATCGTCCAGTACGCGCTCACCGCCCTGATCGCCGGCGCCGCGGAGGCCGCCGAGATCGAC
CCCGACCGGGTCGGTTTCGCCCGGACACTGCGCCTGGTCCGCCGTTCCGCCACCGGAACGGCGGACATTTCCCCCTGA

Upstream 100 bases:

>100_bases
GCTGTCGGGGTGTCGGACGGGTCCAGGGTCAATGCCGTGAAGCTTAATTCGATCTTGAATGGTTGATGTTCGCTGTTCGT
GGTTGGCGGGTTGGTACGGC

Downstream 100 bases:

>100_bases
GGACTGGAACGCCCGGCTACCCAGGTTCCACACCGAGATCACCCGCGGGCTCAACCCGCCACGACGCCACCGCACCTGCC
CCCGGGTCGTCAAACGGGCC

Product: transposase IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MAAWPRCRWVVWSRFVASMVTPDQVSVGVLVTAVPRDAVDEAVAACGVGARRAGGKLPPHVTAYLTLAMSLFPDDDYAEV
AQKVTGSLDRFGCWDAAWAPPSASGITQARKRLGRMVMAEVFERVAGQVATLSTRGAWLRGRLLLAIDGFDVDVPDTEEN
AAEFGYAGTGEKRSAFPKIRVVALAECGTHAFRAAEVGGWAAGERTLARGLLMRLNRDEVLTADRGFYSFDNWALAAGTG
ADLIWRAPTGLNLPVVRVLSDGTFLTVLINPEITGGRRRERLLAAAKAGDELDPDEAHLARVVEYDIPDRAGNGTGELVV
VLTTILDPRQARADEVAAGYNERWEEETANDQLKTHLRGPGRVLRSRLPDLAVQEMWAWLIVQYALTALIAGAAEAAEID
PDRVGFARTLRLVRRSATGTADISP

Sequences:

>Translated_425_residues
MAAWPRCRWVVWSRFVASMVTPDQVSVGVLVTAVPRDAVDEAVAACGVGARRAGGKLPPHVTAYLTLAMSLFPDDDYAEV
AQKVTGSLDRFGCWDAAWAPPSASGITQARKRLGRMVMAEVFERVAGQVATLSTRGAWLRGRLLLAIDGFDVDVPDTEEN
AAEFGYAGTGEKRSAFPKIRVVALAECGTHAFRAAEVGGWAAGERTLARGLLMRLNRDEVLTADRGFYSFDNWALAAGTG
ADLIWRAPTGLNLPVVRVLSDGTFLTVLINPEITGGRRRERLLAAAKAGDELDPDEAHLARVVEYDIPDRAGNGTGELVV
VLTTILDPRQARADEVAAGYNERWEEETANDQLKTHLRGPGRVLRSRLPDLAVQEMWAWLIVQYALTALIAGAAEAAEID
PDRVGFARTLRLVRRSATGTADISP
>Mature_424_residues
AAWPRCRWVVWSRFVASMVTPDQVSVGVLVTAVPRDAVDEAVAACGVGARRAGGKLPPHVTAYLTLAMSLFPDDDYAEVA
QKVTGSLDRFGCWDAAWAPPSASGITQARKRLGRMVMAEVFERVAGQVATLSTRGAWLRGRLLLAIDGFDVDVPDTEENA
AEFGYAGTGEKRSAFPKIRVVALAECGTHAFRAAEVGGWAAGERTLARGLLMRLNRDEVLTADRGFYSFDNWALAAGTGA
DLIWRAPTGLNLPVVRVLSDGTFLTVLINPEITGGRRRERLLAAAKAGDELDPDEAHLARVVEYDIPDRAGNGTGELVVV
LTTILDPRQARADEVAAGYNERWEEETANDQLKTHLRGPGRVLRSRLPDLAVQEMWAWLIVQYALTALIAGAAEAAEIDP
DRVGFARTLRLVRRSATGTADISP

Specific function: Involved in the transposition of the insertion sequence IS4 [H]

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1790729, Length=379, Percent_Identity=25.8575197889182, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 45957; Mature: 45825

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAWPRCRWVVWSRFVASMVTPDQVSVGVLVTAVPRDAVDEAVAACGVGARRAGGKLPPH
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCHHCCCCCCCH
VTAYLTLAMSLFPDDDYAEVAQKVTGSLDRFGCWDAAWAPPSASGITQARKRLGRMVMAE
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VFERVAGQVATLSTRGAWLRGRLLLAIDGFDVDVPDTEENAAEFGYAGTGEKRSAFPKIR
HHHHHCCCEEEEECCCCEEECEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEE
VVALAECGTHAFRAAEVGGWAAGERTLARGLLMRLNRDEVLTADRGFYSFDNWALAAGTG
EEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEECCCEEEECCCC
ADLIWRAPTGLNLPVVRVLSDGTFLTVLINPEITGGRRRERLLAAAKAGDELDPDEAHLA
CCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
RVVEYDIPDRAGNGTGELVVVLTTILDPRQARADEVAAGYNERWEEETANDQLKTHLRGP
HHHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH
GRVLRSRLPDLAVQEMWAWLIVQYALTALIAGAAEAAEIDPDRVGFARTLRLVRRSATGT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCC
ADISP
CCCCC
>Mature Secondary Structure 
AAWPRCRWVVWSRFVASMVTPDQVSVGVLVTAVPRDAVDEAVAACGVGARRAGGKLPPH
CCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHCCCCHHCCCCCCCH
VTAYLTLAMSLFPDDDYAEVAQKVTGSLDRFGCWDAAWAPPSASGITQARKRLGRMVMAE
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VFERVAGQVATLSTRGAWLRGRLLLAIDGFDVDVPDTEENAAEFGYAGTGEKRSAFPKIR
HHHHHCCCEEEEECCCCEEECEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEE
VVALAECGTHAFRAAEVGGWAAGERTLARGLLMRLNRDEVLTADRGFYSFDNWALAAGTG
EEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEECCCEEEECCCC
ADLIWRAPTGLNLPVVRVLSDGTFLTVLINPEITGGRRRERLLAAAKAGDELDPDEAHLA
CCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
RVVEYDIPDRAGNGTGELVVVLTTILDPRQARADEVAAGYNERWEEETANDQLKTHLRGP
HHHHCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH
GRVLRSRLPDLAVQEMWAWLIVQYALTALIAGAAEAAEIDPDRVGFARTLRLVRRSATGT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCC
ADISP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6268937; 7610040; 9278503 [H]