| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317289
Identifier: 158317289
GI number: 158317289
Start: 6706496
End: 6706795
Strand: Reverse
Name: 158317289
Synonym: Franean1_5537
Alternate gene names: NA
Gene position: 6706795-6706496 (Counterclockwise)
Preceding gene: 158317290
Following gene: 158317288
Centisome position: 74.67
GC content: 72.0
Gene sequence:
>300_bases ATGAGCATCTTCTCTTCCGGCAACTTCGGCGCGTGGCGCACCCCCGGCGGGGACTCCCCGCTTGCCGCGACCCGTACGAC CGACAGCGGCGACCACACGCTAACCATCCGGCCCGGCGCGGACGTCGGCGACCTGGCCGCGGTCCTGGGCGCCATGCCCG CGGACGCCGTGTTCTCGGAGCACTTCGGAGACGTCGACCTCGTCCTGATCTTCCGGCAGGACCCCGGAGTTTCGGCAATT GTCCCGGCCGGTGCGAACCCCTCGGCGGGACCGGCGGCGGCGAGCGTCCCCCGCTTGTAG
Upstream 100 bases:
>100_bases ACCACGGCCCGGCCCGGACGCAAGGCGGTCCCGGCGAGTGCGCCAACACCCGACCGGGACCTGAGACCCCACCCCTGCCT ACAACAGGAGCGAAGCCCTG
Downstream 100 bases:
>100_bases CGGCTGCCCTGCCTGCTCTACCCCCATTTTTCTTCCGTTCTCTGGTGGCGTTAAAAGCTGTCGGGGTGTCGGACGGGTCC AGGGTCAATGCCGTGAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSIFSSGNFGAWRTPGGDSPLAATRTTDSGDHTLTIRPGADVGDLAAVLGAMPADAVFSEHFGDVDLVLIFRQDPGVSAI VPAGANPSAGPAAASVPRL
Sequences:
>Translated_99_residues MSIFSSGNFGAWRTPGGDSPLAATRTTDSGDHTLTIRPGADVGDLAAVLGAMPADAVFSEHFGDVDLVLIFRQDPGVSAI VPAGANPSAGPAAASVPRL >Mature_98_residues SIFSSGNFGAWRTPGGDSPLAATRTTDSGDHTLTIRPGADVGDLAAVLGAMPADAVFSEHFGDVDLVLIFRQDPGVSAIV PAGANPSAGPAAASVPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9903; Mature: 9772
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFSSGNFGAWRTPGGDSPLAATRTTDSGDHTLTIRPGADVGDLAAVLGAMPADAVFSE CCCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHH HFGDVDLVLIFRQDPGVSAIVPAGANPSAGPAAASVPRL CCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SIFSSGNFGAWRTPGGDSPLAATRTTDSGDHTLTIRPGADVGDLAAVLGAMPADAVFSE CCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHH HFGDVDLVLIFRQDPGVSAIVPAGANPSAGPAAASVPRL CCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA