| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317287
Identifier: 158317287
GI number: 158317287
Start: 6704435
End: 6704644
Strand: Reverse
Name: 158317287
Synonym: Franean1_5535
Alternate gene names: NA
Gene position: 6704644-6704435 (Counterclockwise)
Preceding gene: 158317288
Following gene: 158317286
Centisome position: 74.64
GC content: 67.14
Gene sequence:
>210_bases ATGCACACCGACCATGAGGAACATCCGACGATGAGCCTGCAACAGGCTCTCCGGGAGCACCTCGACCGTGCCCGCACCGG GCAGGGCCGGCTCTACCCACAGCCGGACGGTGAGTCCAAGTTCGCCTGCGACATGGGCGACAGCCGCTACGGCTGCCCCT GGTGCGACAACATCGAATGGCCCGACGGCAACCCGCTGGACGCTGCCTGA
Upstream 100 bases:
>100_bases CATCCAAACGCCAGAGAACGGAAACCCACCGGCACCGGGCGACGCCAACCAGCGGCTCGAGTGCCGTTCCCCGTTCTTTC GGCAAGGAGCCCTCTTCGCC
Downstream 100 bases:
>100_bases TGGCCGCGCGCAAGGGGCGGCGGGGCGCCGGTGAGGGCGCGATCTACAAGGACAGCTCCGGCCGCTGGCGGGCGACCGTA GACCTCGGCTGGAAGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MHTDHEEHPTMSLQQALREHLDRARTGQGRLYPQPDGESKFACDMGDSRYGCPWCDNIEWPDGNPLDAA
Sequences:
>Translated_69_residues MHTDHEEHPTMSLQQALREHLDRARTGQGRLYPQPDGESKFACDMGDSRYGCPWCDNIEWPDGNPLDAA >Mature_69_residues MHTDHEEHPTMSLQQALREHLDRARTGQGRLYPQPDGESKFACDMGDSRYGCPWCDNIEWPDGNPLDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7856; Mature: 7856
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDHEEHPTMSLQQALREHLDRARTGQGRLYPQPDGESKFACDMGDSRYGCPWCDNIEW CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC PDGNPLDAA CCCCCCCCC >Mature Secondary Structure MHTDHEEHPTMSLQQALREHLDRARTGQGRLYPQPDGESKFACDMGDSRYGCPWCDNIEW CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC PDGNPLDAA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA