Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317088

Identifier: 158317088

GI number: 158317088

Start: 6422023

End: 6423201

Strand: Direct

Name: 158317088

Synonym: Franean1_5332

Alternate gene names: NA

Gene position: 6422023-6423201 (Clockwise)

Preceding gene: 158317086

Following gene: 158317089

Centisome position: 71.5

GC content: 69.13

Gene sequence:

>1179_bases
GTGTCCCATACCTGGCGGGTCTCACCCGGTTCGAAGCGGACGATGCCGAACAGCAGCGGCCCGGGATCACCTCCACCTGC
TCTGTCTGCTCTGTCGAACATCACGTTCCGTCCTCCTGTGTTGGATCGTGGGCGACGAGGCACCGGAACCGACCCGCGAA
GGTGTTCGACCTGCGGCGGATCTGGTGCCCGCCCACCGTCCAACCGGACGGCTTGTCACGGAAGGCCGCCGGCCGTATAC
GCCGAGGGTTCCGATCTATACGGAGACCGGATAGGCTCTGCGCGTCCGATCAAGGACAGACGGTCCTGTACCTACCGTCC
GGAGGCGCCCGTGGTTTCCGTCCGCCGCCCGTTACCCCAGGCCCCGCCGGGACTCTGGGACCGGCCAGAGATGGCCGACG
CACTCGCCCGCCGTGACATCGGCACCGTCTTCAAGATCTACCGCCAGTGGACCGGCGCGACCCAGACACAGATCGCCGCT
GTCTGCGGCCTCCCGCAGTCCCACGTCAGCGAGATCTCAACCGGCCGCCGCCAGGTCACCAGCCTGGAGATCTTCGAGCG
CATCGCCGACGGCATCGACATCCCCCGGGGCCGCATCGGACTTGCCGAAAGACCCGGCGCCGTCCCTGAGCCACGGACCG
AGCCCGGAGCGCCCGTCGTCAACGTGCCCGGCGACATCGTGCACGTCTATCCCAGCCGGACAGCCGTCCCGTCCGAGCTG
TGGCGGACGCTGTTCGCCGGCGCGCGCCACCAGGTCGACGTCCTCGTGATCGCCGGCCTGTTCCTCCCCGACGGCCACGC
CGACTTCACCACCGTCCTCCGCCACAAAGGCGCGGAAGGCGTCACGATCCGCTACGCACTCGGCGACCCCGAATCACCCG
CCGTCGCTCTCCGCGGCGAAGAGGAAGGGATCGGCGACGGGCTCGCCGCCCGGACCCGGATCACGCTCACCTACCTCGCG
TCCCTCCGCGAGGCGCCCGGGATCGAGCTACGGCTCCACGCCACCACGCTCTACAACTCCATCTACCGGTTCGACGGCGA
CATGCTCGTCAACACCCACGTGTACGGCGCCCCCGCCGCGCACTCCCCCGTCATGCACCTACGCGCCCAGTCCGGTGGCC
TGTTCGACCACTACGCCGCCAGCTTCGAGCGCATCTGGGCCACCACCGAAGGAGCCTGA

Upstream 100 bases:

>100_bases
GTCGTGGACGAAGAACCGCAGCGGGGTGACCTGGTAGTCGTGCCAGCCCTGTTCGATCGCGAACAGGTCAGCCGCGGCCG
GCGAGTTGAAGGTGATGACC

Downstream 100 bases:

>100_bases
ACCCTCTTGGCGCGAATCGACTACTTCAACGACCCGAACGCCCCCAAGGCGAACAGCGTCGTCCCCTCCGTGACCGCCGT
CGTCACCGACGAGGCCGGAC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSHTWRVSPGSKRTMPNSSGPGSPPPALSALSNITFRPPVLDRGRRGTGTDPRRCSTCGGSGARPPSNRTACHGRPPAVY
AEGSDLYGDRIGSARPIKDRRSCTYRPEAPVVSVRRPLPQAPPGLWDRPEMADALARRDIGTVFKIYRQWTGATQTQIAA
VCGLPQSHVSEISTGRRQVTSLEIFERIADGIDIPRGRIGLAERPGAVPEPRTEPGAPVVNVPGDIVHVYPSRTAVPSEL
WRTLFAGARHQVDVLVIAGLFLPDGHADFTTVLRHKGAEGVTIRYALGDPESPAVALRGEEEGIGDGLAARTRITLTYLA
SLREAPGIELRLHATTLYNSIYRFDGDMLVNTHVYGAPAAHSPVMHLRAQSGGLFDHYAASFERIWATTEGA

Sequences:

>Translated_392_residues
MSHTWRVSPGSKRTMPNSSGPGSPPPALSALSNITFRPPVLDRGRRGTGTDPRRCSTCGGSGARPPSNRTACHGRPPAVY
AEGSDLYGDRIGSARPIKDRRSCTYRPEAPVVSVRRPLPQAPPGLWDRPEMADALARRDIGTVFKIYRQWTGATQTQIAA
VCGLPQSHVSEISTGRRQVTSLEIFERIADGIDIPRGRIGLAERPGAVPEPRTEPGAPVVNVPGDIVHVYPSRTAVPSEL
WRTLFAGARHQVDVLVIAGLFLPDGHADFTTVLRHKGAEGVTIRYALGDPESPAVALRGEEEGIGDGLAARTRITLTYLA
SLREAPGIELRLHATTLYNSIYRFDGDMLVNTHVYGAPAAHSPVMHLRAQSGGLFDHYAASFERIWATTEGA
>Mature_391_residues
SHTWRVSPGSKRTMPNSSGPGSPPPALSALSNITFRPPVLDRGRRGTGTDPRRCSTCGGSGARPPSNRTACHGRPPAVYA
EGSDLYGDRIGSARPIKDRRSCTYRPEAPVVSVRRPLPQAPPGLWDRPEMADALARRDIGTVFKIYRQWTGATQTQIAAV
CGLPQSHVSEISTGRRQVTSLEIFERIADGIDIPRGRIGLAERPGAVPEPRTEPGAPVVNVPGDIVHVYPSRTAVPSELW
RTLFAGARHQVDVLVIAGLFLPDGHADFTTVLRHKGAEGVTIRYALGDPESPAVALRGEEEGIGDGLAARTRITLTYLAS
LREAPGIELRLHATTLYNSIYRFDGDMLVNTHVYGAPAAHSPVMHLRAQSGGLFDHYAASFERIWATTEGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42289; Mature: 42158

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTWRVSPGSKRTMPNSSGPGSPPPALSALSNITFRPPVLDRGRRGTGTDPRRCSTCGG
CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCC
SGARPPSNRTACHGRPPAVYAEGSDLYGDRIGSARPIKDRRSCTYRPEAPVVSVRRPLPQ
CCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEHHCCCCCC
APPGLWDRPEMADALARRDIGTVFKIYRQWTGATQTQIAAVCGLPQSHVSEISTGRRQVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
SLEIFERIADGIDIPRGRIGLAERPGAVPEPRTEPGAPVVNVPGDIVHVYPSRTAVPSEL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHH
WRTLFAGARHQVDVLVIAGLFLPDGHADFTTVLRHKGAEGVTIRYALGDPESPAVALRGE
HHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECC
EEGIGDGLAARTRITLTYLASLREAPGIELRLHATTLYNSIYRFDGDMLVNTHVYGAPAA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCEEEEEEEECCCCC
HSPVMHLRAQSGGLFDHYAASFERIWATTEGA
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHTWRVSPGSKRTMPNSSGPGSPPPALSALSNITFRPPVLDRGRRGTGTDPRRCSTCGG
CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCC
SGARPPSNRTACHGRPPAVYAEGSDLYGDRIGSARPIKDRRSCTYRPEAPVVSVRRPLPQ
CCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEHHCCCCCC
APPGLWDRPEMADALARRDIGTVFKIYRQWTGATQTQIAAVCGLPQSHVSEISTGRRQVT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
SLEIFERIADGIDIPRGRIGLAERPGAVPEPRTEPGAPVVNVPGDIVHVYPSRTAVPSEL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCHHHH
WRTLFAGARHQVDVLVIAGLFLPDGHADFTTVLRHKGAEGVTIRYALGDPESPAVALRGE
HHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECC
EEGIGDGLAARTRITLTYLASLREAPGIELRLHATTLYNSIYRFDGDMLVNTHVYGAPAA
CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCEEEEEEEECCCCC
HSPVMHLRAQSGGLFDHYAASFERIWATTEGA
CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA