| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317086
Identifier: 158317086
GI number: 158317086
Start: 6420372
End: 6420830
Strand: Direct
Name: 158317086
Synonym: Franean1_5330
Alternate gene names: NA
Gene position: 6420372-6420830 (Clockwise)
Preceding gene: 158317078
Following gene: 158317088
Centisome position: 71.48
GC content: 68.85
Gene sequence:
>459_bases ATGACAAACAAACGGGGGATTCCACCGTACACGGCACGCGGCAGAGTCGAGGGTGAGGACTGGCAGGCGGTCGCCGACGC CCTCAACGCGAGGATGACCCGCAAGCGGATGGGACAGCAAGCACTCGCCACCGCGTCAGGCGTGTCCGTCGCGACGCTAC GCCAGCTCCAACACGGCGCCCAGGGCCGCCGGGTCCAGGACGCCACCCTGGCCGCCGTCGCCCGTGCGCTCGACTGGCCG GACGACCATCTGACCCGCGTCCTCGTTCACCTCGAGGGAACCAGCGAGACGCCCTCAAACCAGGGCGAGGACCACGGAGG ACCGCCGATCGATCGTCAGATCCTGGCCGTCCTGTTGCGGATCGAACAGCGGCTCGCCGATCTCTCAGAACGGATCGCTC CCACCGGGCCACCGAGGACGAACCGCGGCAACGACAACGGGCCGGCACCGACGGAGTAG
Upstream 100 bases:
>100_bases CAATCGCCAAGCACTTTCGTTCCGACGTATACGGACTCCGGATGGAAATTATCCACCCACCGGCTGGAATGCCCGTCCGC CACAACGCTACCTTTGACAG
Downstream 100 bases:
>100_bases CTTCCGCCGGTGCCGGCCCGCCGACCAAATCGTCGGACTTAGCTTGCTTGTACACGCCGCATATGGCGATGTCGGAGACG GTGCACCCACGGATGCCAGA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator Xre Family
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTNKRGIPPYTARGRVEGEDWQAVADALNARMTRKRMGQQALATASGVSVATLRQLQHGAQGRRVQDATLAAVARALDWP DDHLTRVLVHLEGTSETPSNQGEDHGGPPIDRQILAVLLRIEQRLADLSERIAPTGPPRTNRGNDNGPAPTE
Sequences:
>Translated_152_residues MTNKRGIPPYTARGRVEGEDWQAVADALNARMTRKRMGQQALATASGVSVATLRQLQHGAQGRRVQDATLAAVARALDWP DDHLTRVLVHLEGTSETPSNQGEDHGGPPIDRQILAVLLRIEQRLADLSERIAPTGPPRTNRGNDNGPAPTE >Mature_151_residues TNKRGIPPYTARGRVEGEDWQAVADALNARMTRKRMGQQALATASGVSVATLRQLQHGAQGRRVQDATLAAVARALDWPD DHLTRVLVHLEGTSETPSNQGEDHGGPPIDRQILAVLLRIEQRLADLSERIAPTGPPRTNRGNDNGPAPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16466; Mature: 16334
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKRGIPPYTARGRVEGEDWQAVADALNARMTRKRMGQQALATASGVSVATLRQLQHGA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC QGRRVQDATLAAVARALDWPDDHLTRVLVHLEGTSETPSNQGEDHGGPPIDRQILAVLLR CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IEQRLADLSERIAPTGPPRTNRGNDNGPAPTE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNKRGIPPYTARGRVEGEDWQAVADALNARMTRKRMGQQALATASGVSVATLRQLQHGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC QGRRVQDATLAAVARALDWPDDHLTRVLVHLEGTSETPSNQGEDHGGPPIDRQILAVLLR CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH IEQRLADLSERIAPTGPPRTNRGNDNGPAPTE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA