Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317075

Identifier: 158317075

GI number: 158317075

Start: 6407382

End: 6408785

Strand: Direct

Name: 158317075

Synonym: Franean1_5319

Alternate gene names: NA

Gene position: 6407382-6408785 (Clockwise)

Preceding gene: 158317073

Following gene: 158317078

Centisome position: 71.34

GC content: 72.79

Gene sequence:

>1404_bases
ATGCGAGCGGATGACCAGCGAGTCGGACTTGCCTGCGAGGCATTCTTCTTCGGGTACCCCCTCGTGTGCGCGGTCCGGCA
GATCATCAGGATCGCCCACGACGGGCTCGGGCCGATCGAGCCGGCCGGCTTCAACGCCTTCGCCCACGAGACCGACCCGC
CCGGTCCGCACTCACACTTCCTGCACGTCAGCCCGGACGTCCTGGTCTCGCTCGCCCAGGTCGACCTGAGCCCCGGGCCC
CTGGTCCTGCACGTGCCGCCGACCCCCGGGCGCTACCTCGTCCTGGAGCTCTACGACGTGTGGCTGAACGTGTTCGCCTA
TCTCGGCACCCGGGTCACCGGGGACGACGGTGGCGACATCCTGCTGCTCCCGCCCGGCACGGCGGACGCTTCCAGCACGG
CGGACGCTTCCAGCACGGCGGACGCTTCCAGCGCGGCGGACGCTTCCGCGCACGACCGCGTGGTCGAGGCACCGTCGCGG
GTCGTCAGCATCATCGCCCGGTTCGGCTACGGCGGGCCGGCGGACCTGCCCGCCGTCCGGGCCCTTCAGGACACGCTGAC
CCTGCGCCCGCCCGACCCGGGCGCGCGGCGGCCGGAGGGGCCACCGGACGGCTCCAAGCGCGTCTGCGACGACCTGCGCT
TCTGGGAGGAGCTGCGAACCTGGATGCACGCCTTCCCCCCACCGGCCGCGGAACGCGACTACGCCCGCCGGTTCGAGGCA
CTCGGCCTGCTGACGGACCCGTCGCCCTACATCGACCCCGATCCGCGGCTCGCCTGGTCGCTGCGCAGCGGCCTGCGCAC
GGGCCGGGACGAGCTGGAACGGCTCGCCGCCGCCGGCCGCCGGGCCCATCAGGGCTGGGCCGGCACCCTGCACGAGGCCG
ACTACAACCTCGACCGGTTCGGCCCGGGCGTGCTGGACGACCGGCACTGGGAGATCCCGGACCGGGCGCAGGCCCGGATC
GCCCGTGCGATGGCAGCGCGCCGGCCGCTCGGCATCGTCCACGCCTACGAGTCGACGTCGGCGTGCTGCTCGGTGGACGC
CGACGGGCGCCACCTCACCGGAGCGCACAGCTACCTGTTCCGCCTCCCGCCACCGGCGGTCGACGCGTTCTGGACGGTCG
CGATGTACGACGAGCCCGAGGGCTACCTCGTCGACAATCCCCTGCACCGGTACGCGATCGACAGCCGGGACGATCTCGTC
CACGCCGCCGACGGAACCGTCCCGATACTGATCCAAAGTGACGCTCCGGCAACGGAGACCGCGACGGACGCCGGTGCGGT
GATGCCGGCGAACTGGCTGCCGGCCGCCGCGGGTGACTTCCGGCTGGTGCTGCGGATGTACCTGCCCGGCAAGGAGGTAC
TCAGCGGCACCTACGCCCCGCCACCGATCCACCGACTGGCCTGA

Upstream 100 bases:

>100_bases
CCGATGTTCAACCGGGCACGAATCGGGTACTCCCCGGAGTTGGGCGAGCACCATCGGCCATCGGACCGGCGTCGATGGGC
CGGGGCTCCCGGGAGGCCAC

Downstream 100 bases:

>100_bases
CTTTCACAACAGCGCGCCGCGGATCAGGCGCGCCGCGGATCAGGACAGCGCGATGCGGACGGCGGGCCGCGGGCCCTGGC
CGGTCTCGTCCACGTGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHFLHVSPDVLVSLAQVDLSPGP
LVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDILLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSR
VVSIIARFGYGGPADLPAVRALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA
LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRFGPGVLDDRHWEIPDRAQARI
ARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLFRLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLV
HAADGTVPILIQSDAPATETATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA

Sequences:

>Translated_467_residues
MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHFLHVSPDVLVSLAQVDLSPGP
LVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDILLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSR
VVSIIARFGYGGPADLPAVRALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA
LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRFGPGVLDDRHWEIPDRAQARI
ARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLFRLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLV
HAADGTVPILIQSDAPATETATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA
>Mature_467_residues
MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHFLHVSPDVLVSLAQVDLSPGP
LVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDILLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSR
VVSIIARFGYGGPADLPAVRALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA
LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRFGPGVLDDRHWEIPDRAQARI
ARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLFRLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLV
HAADGTVPILIQSDAPATETATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA

Specific function: Unknown

COG id: COG5361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50628; Mature: 50628

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHF
CCCCCCHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
LHVSPDVLVSLAQVDLSPGPLVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDI
EEECHHHHHHHHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCCCE
LLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSRVVSIIARFGYGGPADLPAVR
EEECCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA
HHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRF
HCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHC
GPGVLDDRHWEIPDRAQARIARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLF
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEECCHHHEEE
RLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLVHAADGTVPILIQSDAPATET
ECCCCCCCCEEEEEEEECCCCCEECCCHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCC
ATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHCC
>Mature Secondary Structure
MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHF
CCCCCCHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
LHVSPDVLVSLAQVDLSPGPLVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDI
EEECHHHHHHHHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCCCE
LLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSRVVSIIARFGYGGPADLPAVR
EEECCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
ALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA
HHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRF
HCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHC
GPGVLDDRHWEIPDRAQARIARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLF
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEECCHHHEEE
RLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLVHAADGTVPILIQSDAPATET
ECCCCCCCCEEEEEEEECCCCCEECCCHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCC
ATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA