| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316671
Identifier: 158316671
GI number: 158316671
Start: 5893661
End: 5894146
Strand: Reverse
Name: 158316671
Synonym: Franean1_4908
Alternate gene names: NA
Gene position: 5894146-5893661 (Counterclockwise)
Preceding gene: 158316672
Following gene: 158316666
Centisome position: 65.62
GC content: 74.28
Gene sequence:
>486_bases ATGAGCGGTGTGGAGCTGCTCGCCGTGGCGCTGGTGATGGCGGTCGGTGTCGTCGGTGTGGTCGTGCCGGTGATGCCCGG CCTGCTCCTCGTCTGGGGCGCCGGCGTGTGGTGGACGATCGCGGACGGCGGCGGCGCGGGCCGCTGGGCGGTGCTCGCGG TCATGAGCGCACTGTTCGTCGCCGGCGCGCTGGCCAAGTACGTGCTGCCGGGCCGGGCCGCGTCGGCCGCTGGCGCGCCG TTCTCGACGATGCTCATCGGCGCGGTCTGCGCCGTCATCGGCTTCTTCGTGGTGCCGGTTCTCGGCCTGCTCGTCGGCGG GCTCGCGGGCATCTACCTCGCGGAGCTCACCCGCCTGCGCGACGCCCGGCGAGCCACCGCCTCGACCTGGGTCGCTGTCG TCGCCTTCGGTGTCGGGCTGCTCGTCGAGCTCGGTGCGGCCGTCGCGATGGCCGCGACCTGGGGCGTCGGCGAGCTCGTC AGCTGA
Upstream 100 bases:
>100_bases CACCGGCGGGGCGGGTATTTTCGGGCGGAGCACGCCAGCCGCGCAAGCCGGGCATCATGCCGCCGGGCATCAGGATGTCG GGTACCGGGAGGTCGTCGCC
Downstream 100 bases:
>100_bases ACCCGTAGTCATCCGGGCCGGGTGCGCGGCGTGGGGAAGCCCGGCTCCGGAGGAAAGGGAAGTGCGCCGGGGAACTGTGG TCGCGATGGCGGAAAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFVAGALAKYVLPGRAASAAGAP FSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLRDARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELV S
Sequences:
>Translated_161_residues MSGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFVAGALAKYVLPGRAASAAGAP FSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLRDARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELV S >Mature_160_residues SGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFVAGALAKYVLPGRAASAAGAPF STMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLRDARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16003; Mature: 15872
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH AGALAKYVLPGRAASAAGAPFSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure SGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH AGALAKYVLPGRAASAAGAPFSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA