| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yhbW [C]
Identifier: 158316591
GI number: 158316591
Start: 5766605
End: 5767663
Strand: Reverse
Name: yhbW [C]
Synonym: Franean1_4827
Alternate gene names: 158316591
Gene position: 5767663-5766605 (Counterclockwise)
Preceding gene: 158316592
Following gene: 158316590
Centisome position: 64.21
GC content: 71.67
Gene sequence:
>1059_bases GTGAAGTTCATCGGCCTGTCGGCACTCGCGCACTCGCCGGACCTGGAGACCGGCCGGTTGCCGTCGGAAACCGAGGTCGT GCGCCGCGCGGTCGAGACGGCTGTCCTGTTCGAGGAGCTGGGATTCGACGGCTTCGGGTTCGGTGAGCGTCACCACCCGC CGTTCCTGTCGACGTCCCCGACCGTCCTGCTGGGCCACATCGCCGCGCTGACGTCCCGGATCCGCCTGTTCACCGGCGTC ACGCTGCTGTCGGTGCTCGACCCGGTCCGCGTCGCGGAGGACTACGCGACCATCGACCACCTCTCCGGCGGCCGGGTCGA GTTGATCATCGGCAAGGGTTCCGGCCCCAAGCAGGCGGAGCTGTTCGGGCTGACCCGCGACCAGCAGCGCGACGCCCTCA ACGAGAAGTTCCGCCTCCTGCACCGGTTGTGGACCGAGCGTGACGTGAGCTGGCGCGGCACCACCCGCCCGCCACTGGAC CGGGTGACCACGCTGCCCCGGCCGGTGCCCCGCCCCGGCGGTGCCCGGCCGCGCATCTGGCACGGCGGTGGCACGTCCCC CGACTCGGTCGACCTCGCCGCAGAGTTCGGCGATCCGGTGATGTTCTCCAACGCGTCCGCGCCGACGGAGAAGTACACCT GGCTGTCCGATCACTACACGCAGCGCTGGGAGGCCTACGGCCGCGACCCGGCCGCGCTCTACACCGGCGCGGGGACGACC GCCTACTACAGCGCGCCCACCTCCCAGCAGGCGCTGGCCGACTTCCGGCCGATCTTCGAGGCGCGGCTGCGGGCCCAGAG CGGCATCGGCATGCCGCCGGACTTCCCGACCCTGGAGGACTTCGTCGAGAGCAGCTCGGCCCTCATCGGCAGCCCCGCGC AGGTCATCGAGAAGGTCGAGCGCGACGCGAGCCTGCTCGGGAACAGCGCGCTGATCTTCAGCGTGGAGGCCGAGGGGCTC AGCCACGACCAGCGCCGGGCCAGTTTCGAGCTGTTCGCCACCGACATCGCGCCCACGCTGCGGACCTCCGTCCCCGACCC GCCGTGGCCCGCCCAGTGA
Upstream 100 bases:
>100_bases CCCCGCATCGCCCGGGACGGGAGCGCGGCCCGCCGCGCTCCGGAGGCGGTCGCGGTCGGTCCGGCCCCGTCCGTAACGTG ATCCCCGGAGGTCTCCGAAG
Downstream 100 bases:
>100_bases CCGCGGGCCCGCGGTGACCTCCGCCCCGCGGACTCCGCGGATCCCGACTGCGCGGGCCCTGAAGGCCCCGCGGGGCGGCG CGGTCGGGGGATACCGCGTC
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSPTVLLGHIAALTSRIRLFTGV TLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAELFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLD RVTTLPRPVPRPGGARPRIWHGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVERDASLLGNSALIFSVEAEGL SHDQRRASFELFATDIAPTLRTSVPDPPWPAQ
Sequences:
>Translated_352_residues MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSPTVLLGHIAALTSRIRLFTGV TLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAELFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLD RVTTLPRPVPRPGGARPRIWHGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVERDASLLGNSALIFSVEAEGL SHDQRRASFELFATDIAPTLRTSVPDPPWPAQ >Mature_352_residues MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSPTVLLGHIAALTSRIRLFTGV TLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAELFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLD RVTTLPRPVPRPGGARPRIWHGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVERDASLLGNSALIFSVEAEGL SHDQRRASFELFATDIAPTLRTSVPDPPWPAQ
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=342, Percent_Identity=26.6081871345029, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 38560; Mature: 38560
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00933 FGGY_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSP CCEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TVLLGHIAALTSRIRLFTGVTLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHH LFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLDRVTTLPRPVPRPGGARPRIW HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEE HGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT CCCCCCCCCEEHHHHCCCCEEECCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCE AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVE EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHH RDASLLGNSALIFSVEAEGLSHDQRRASFELFATDIAPTLRTSVPDPPWPAQ HHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSP CCEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TVLLGHIAALTSRIRLFTGVTLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHH LFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLDRVTTLPRPVPRPGGARPRIW HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEE HGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT CCCCCCCCCEEHHHHCCCCEEECCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCE AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVE EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHH RDASLLGNSALIFSVEAEGLSHDQRRASFELFATDIAPTLRTSVPDPPWPAQ HHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]