| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315642
Identifier: 158315642
GI number: 158315642
Start: 4574453
End: 4574863
Strand: Reverse
Name: 158315642
Synonym: Franean1_3852
Alternate gene names: NA
Gene position: 4574863-4574453 (Counterclockwise)
Preceding gene: 158315644
Following gene: 158315641
Centisome position: 50.93
GC content: 61.07
Gene sequence:
>411_bases GTGTTCAAGCAGGTCTGCTTCTTCAAGAAGCGCCCGGACATGACAACGGAAGAGTTCCTGGACTACTACGAGAACCAGCA CACACAGCTGGCGAAGAAGATCGGGAAGCCGGCCATACCGAACGCGGTCCGGTACGTGCGACGCTACCTGACTCCCGTCG AGAACCCGGTGACCGGAGAAATCCACGACAGCGGTTACGACTGCATCATGGAGATCTGGTGGAACAGCCGCGAGGACTTC GAGAACTCGCAGCGTCTCATCAGGGACCCCGAGCGGCTGCCGCACACGATCGAGGACGAGAAGAAGCTGTTCGCCACGCA CGCCAACCCGATCTGCATCGTGGAGGAACACGATTCGCCGATGGGTCCCGACGGGGAGACCTACGACTGGGTTCCGGTCG TCCGCGGGTGA
Upstream 100 bases:
>100_bases TTGCTGGCCGGAAACTGGGGAACGCAGAAGCTCAACCGACTGTCGGCCGTAGGCACAGCCGAGCTGGGCCCGGCCGGATT TTTGAGAGGGGCCGCGCCGC
Downstream 100 bases:
>100_bases GCGCCCCGGAGGAACGGCAGGGACCTCCCGGCGGCTTTGACCATCAGGCCCGGTCCGGACCCGACAGGAAGCGGTTAGCC AGATGAGTGACCTTCATGAT
Product: ethyl tert-butyl ether degradation EthD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGEIHDSGYDCIMEIWWNSREDF ENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSPMGPDGETYDWVPVVRG
Sequences:
>Translated_136_residues MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGEIHDSGYDCIMEIWWNSREDF ENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSPMGPDGETYDWVPVVRG >Mature_136_residues MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGEIHDSGYDCIMEIWWNSREDF ENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSPMGPDGETYDWVPVVRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16058; Mature: 16058
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGE CCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC IHDSGYDCIMEIWWNSREDFENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSP CCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCEEEEECCCCC MGPDGETYDWVPVVRG CCCCCCCCCCEECCCC >Mature Secondary Structure MFKQVCFFKKRPDMTTEEFLDYYENQHTQLAKKIGKPAIPNAVRYVRRYLTPVENPVTGE CCCCHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC IHDSGYDCIMEIWWNSREDFENSQRLIRDPERLPHTIEDEKKLFATHANPICIVEEHDSP CCCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCEEEEECCCCC MGPDGETYDWVPVVRG CCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA