Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315480

Identifier: 158315480

GI number: 158315480

Start: 4362810

End: 4363349

Strand: Reverse

Name: 158315480

Synonym: Franean1_3685

Alternate gene names: NA

Gene position: 4363349-4362810 (Counterclockwise)

Preceding gene: 158315481

Following gene: 158315477

Centisome position: 48.58

GC content: 67.59

Gene sequence:

>540_bases
ATGAGTATCAGTGCCGACGACCTGAGCTTCGTCCTGGACCGTGAACAGATCCGCGACCTCCTCGCCCGGCTGGCCCGGGG
CGAGGACCGGCGCGACGCGGATCTGATCAGCGGGGCCTACTGGCCGGACGCGACCGACGACCACGGCATCTTCCGCGGCA
CGTTCAAGGAGTACCTGGCGTGGGTCGTGCCCGGCGCGCCCTCGATTCCCGTCACCCTGCACACGCTGGGCCAGACCCTG
ATCGACGTCACGGGTGACACCGCGGTGGCCGAGACCCACGTCACCTCCTATCACCGGATCGACTTCGGCGAGGAGGAGCA
TGACGTCGTGATCGGCGGCCGTTACGTCGACCGGCTGGAGAAGCGGGACGGGGAGTGGCGCATCGCGCACCGCACCATGC
TCTACGACTGGTTCCGGGATTTCGGGCAGTCGGTGGACTGGTCGCAGGGGGTCATGGGCACCCCGTTCCTCGCCGACCAC
TACGTGGGCAGCGCGAACGGCGACCACAGCGTCACGTTGTTCCAGCAGAAATCCCGCTGA

Upstream 100 bases:

>100_bases
CGCAAGCCGCAGATTCCCTAGGCCAGGCCAGGCCGGGGCAGCCCAGGCCAGGGCGGCCGCCGCCCGTTCCACCCTTCGCC
AACCACGAGGTGAGCCGGAT

Downstream 100 bases:

>100_bases
CCCCGCGCGCCCGCAGCGCCGTCCCGTCCGGATCGACACCCCAGCTGATGATCCGGACGGGATGGATGCGGATGACCTCG
CGGCTGAGATGGCGCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLAWVVPGAPSIPVTLHTLGQTL
IDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLEKRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADH
YVGSANGDHSVTLFQQKSR

Sequences:

>Translated_179_residues
MSISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLAWVVPGAPSIPVTLHTLGQTL
IDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLEKRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADH
YVGSANGDHSVTLFQQKSR
>Mature_178_residues
SISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLAWVVPGAPSIPVTLHTLGQTLI
DVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLEKRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADHY
VGSANGDHSVTLFQQKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20270; Mature: 20138

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLA
CCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
WVVPGAPSIPVTLHTLGQTLIDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLE
HHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCCEEECHHHHHHHH
KRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADHYVGSANGDHSVTLFQQKSR
HCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
SISADDLSFVLDREQIRDLLARLARGEDRRDADLISGAYWPDATDDHGIFRGTFKEYLA
CCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH
WVVPGAPSIPVTLHTLGQTLIDVTGDTAVAETHVTSYHRIDFGEEEHDVVIGGRYVDRLE
HHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCCEEECHHHHHHHH
KRDGEWRIAHRTMLYDWFRDFGQSVDWSQGVMGTPFLADHYVGSANGDHSVTLFQQKSR
HCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]