Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314077

Identifier: 158314077

GI number: 158314077

Start: 2681725

End: 2683155

Strand: Direct

Name: 158314077

Synonym: Franean1_2244

Alternate gene names: NA

Gene position: 2681725-2683155 (Clockwise)

Preceding gene: 158314075

Following gene: 158314078

Centisome position: 29.86

GC content: 72.54

Gene sequence:

>1431_bases
ATGTCCCGCTCGATGATGAGCTTGATACGCGCGCCCCGAGGCGCCGTTCCGTCCGGTTCCGGTTCCGGTTCCGATCAGGA
TCGGGCCTCCGACCGGAGGGGGTCGCCCGCCACCCGCCGTCCGCTGGTCCGGCGCCGGTCGGAGGCCGTGCGGCCCGCCG
GGATCATCCGGTCGCGGCTCGCCGCGGCCTCCGGCGTGCTCGCCGCGGCCGTGGTCCTGGCTTCCTGCTCCTCCGGGGGC
GGGGGCACCGGCCCGGGCCAGAACGAGCCACCGCGCCCGGCCGCGCCGACCGTGACGGTGACCCCGGCCGACGGCGCTGC
CGGCATCGCGCTCACCGAGTCGATCGTGGTGAAGAGCAACGCGCCGCTGGCGTCGGTGACCGTGGCCCGCGGCGCGAGCC
CGACGGAGAAGACCGACCCCGGCACGCTGGAGGGGACCTTCTCCGCCGACCGCCGGACCTGGACGTCCGCGGGTGGGTTG
TTCTCCGACACCCGCTACGACATCCAGGCGGCCACCGCGCCGGCCCAGGGGCTGGACGGCACCAGGAACATCGCATCGAG
CTTCACCACCGGCGTCCCGGACAAGGCGTTCAAGGTGTCGTGGGAGCCGGTCGCCGGTCAGACCGTCGGGGTCGGCGCCC
CGATCAGCCTGACCTTCAGCGCTCCGGTCAAGGACCGCGCGGCGGTGCAGAGCCGCCTGGCGGTGAACGCCGACCCGCCG
GTCCTCGGCGCCTGGAACTGGATGTCGGACCGGATGGCCGTGTGGCGCCCGCAGCAGTACTGGGCGCCCGGGACGAAGGT
GCACGTGGAGGCCAACCTCGCGGGCTTCGACTCCGGCACCGGCTGGATCGGGGTCAAGGACCGCTCGATGGACTTCGCGA
TCGGGGCCGCCCAGATCAGCAAGGTCGACGCGGCCACCCACGTGATGCAGGTGTTCCAGAACGGCCAGCTCGTGCGGACC
ATGCCGATCAGCGGTGGCAAGCCCGGGTTCCTGACCATGGAGGGCCCGCACAACGTGCTGGGCAAGGCCCCGATGGTGAT
CATGGACTCGGCGACGGTCGGCGTGCCGAAGGGCAACCCGGAGTACTACTACGAAGAGGTGCAGTGGGCCGTCCACTACA
CCAGCGGTGGGCAGTACGTGCACTCCGCTCCGTGGTCAGTGGCGTCGCAGGGCCGGGCGAACGTCTCGCACGGGTGCGTG
AACGCCTCCCCGGCGGACGCGCAGTGGTTCTACAACTTCAGTCAGTTCGGCGACATCGTCGACATCAGCAACACCGGTCG
CCCGGCGGATACCCGGCAGCTCGGCAACGAGTGGTCCGTCCCGTGGGACACCTGGAAGGCGGGCAGCGCGCTGCCCGTTG
ACCAGCCCGCGGCCAGCGGTGCGCTGGCGGGCGCTGCGCCCGGCGCGGGGCTGCCCGCCGGTCGGACCTGA

Upstream 100 bases:

>100_bases
CGGTGTCCGCAGGTCACGGCGGCCCGCTGTCCGGCAAGCCACGAACCGGCGCGATGCGTTGCCCCGCCTCACCGGTTCGG
TCTTCGGAAGTAGGCCACGC

Downstream 100 bases:

>100_bases
CCGGCAGCCGGTCCCGCACCGAGGGCGGGTGGCCACGGAGGAACGTCTCCGTGGCCACCCGCCCTCGTCGTTCGAGATCG
GCCGTCCGTGATTGGCTGGA

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MSRSMMSLIRAPRGAVPSGSGSGSDQDRASDRRGSPATRRPLVRRRSEAVRPAGIIRSRLAAASGVLAAAVVLASCSSGG
GGTGPGQNEPPRPAAPTVTVTPADGAAGIALTESIVVKSNAPLASVTVARGASPTEKTDPGTLEGTFSADRRTWTSAGGL
FSDTRYDIQAATAPAQGLDGTRNIASSFTTGVPDKAFKVSWEPVAGQTVGVGAPISLTFSAPVKDRAAVQSRLAVNADPP
VLGAWNWMSDRMAVWRPQQYWAPGTKVHVEANLAGFDSGTGWIGVKDRSMDFAIGAAQISKVDAATHVMQVFQNGQLVRT
MPISGGKPGFLTMEGPHNVLGKAPMVIMDSATVGVPKGNPEYYYEEVQWAVHYTSGGQYVHSAPWSVASQGRANVSHGCV
NASPADAQWFYNFSQFGDIVDISNTGRPADTRQLGNEWSVPWDTWKAGSALPVDQPAASGALAGAAPGAGLPAGRT

Sequences:

>Translated_476_residues
MSRSMMSLIRAPRGAVPSGSGSGSDQDRASDRRGSPATRRPLVRRRSEAVRPAGIIRSRLAAASGVLAAAVVLASCSSGG
GGTGPGQNEPPRPAAPTVTVTPADGAAGIALTESIVVKSNAPLASVTVARGASPTEKTDPGTLEGTFSADRRTWTSAGGL
FSDTRYDIQAATAPAQGLDGTRNIASSFTTGVPDKAFKVSWEPVAGQTVGVGAPISLTFSAPVKDRAAVQSRLAVNADPP
VLGAWNWMSDRMAVWRPQQYWAPGTKVHVEANLAGFDSGTGWIGVKDRSMDFAIGAAQISKVDAATHVMQVFQNGQLVRT
MPISGGKPGFLTMEGPHNVLGKAPMVIMDSATVGVPKGNPEYYYEEVQWAVHYTSGGQYVHSAPWSVASQGRANVSHGCV
NASPADAQWFYNFSQFGDIVDISNTGRPADTRQLGNEWSVPWDTWKAGSALPVDQPAASGALAGAAPGAGLPAGRT
>Mature_475_residues
SRSMMSLIRAPRGAVPSGSGSGSDQDRASDRRGSPATRRPLVRRRSEAVRPAGIIRSRLAAASGVLAAAVVLASCSSGGG
GTGPGQNEPPRPAAPTVTVTPADGAAGIALTESIVVKSNAPLASVTVARGASPTEKTDPGTLEGTFSADRRTWTSAGGLF
SDTRYDIQAATAPAQGLDGTRNIASSFTTGVPDKAFKVSWEPVAGQTVGVGAPISLTFSAPVKDRAAVQSRLAVNADPPV
LGAWNWMSDRMAVWRPQQYWAPGTKVHVEANLAGFDSGTGWIGVKDRSMDFAIGAAQISKVDAATHVMQVFQNGQLVRTM
PISGGKPGFLTMEGPHNVLGKAPMVIMDSATVGVPKGNPEYYYEEVQWAVHYTSGGQYVHSAPWSVASQGRANVSHGCVN
ASPADAQWFYNFSQFGDIVDISNTGRPADTRQLGNEWSVPWDTWKAGSALPVDQPAASGALAGAAPGAGLPAGRT

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 49348; Mature: 49216

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSMMSLIRAPRGAVPSGSGSGSDQDRASDRRGSPATRRPLVRRRSEAVRPAGIIRSRL
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
AAASGVLAAAVVLASCSSGGGGTGPGQNEPPRPAAPTVTVTPADGAAGIALTESIVVKSN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECC
APLASVTVARGASPTEKTDPGTLEGTFSADRRTWTSAGGLFSDTRYDIQAATAPAQGLDG
CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCC
TRNIASSFTTGVPDKAFKVSWEPVAGQTVGVGAPISLTFSAPVKDRAAVQSRLAVNADPP
HHHHHHHHHCCCCCCCEEEECCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHEECCCCC
VLGAWNWMSDRMAVWRPQQYWAPGTKVHVEANLAGFDSGTGWIGVKDRSMDFAIGAAQIS
EEEECCCCCCCCEEECCHHHCCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEECHHHHH
KVDAATHVMQVFQNGQLVRTMPISGGKPGFLTMEGPHNVLGKAPMVIMDSATVGVPKGNP
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCHHHHCCCCEEEEECCEECCCCCCH
EYYYEEVQWAVHYTSGGQYVHSAPWSVASQGRANVSHGCVNASPADAQWFYNFSQFGDIV
HHEEEEEEEEEEECCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCHHEEECHHHCCCEE
DISNTGRPADTRQLGNEWSVPWDTWKAGSALPVDQPAASGALAGAAPGAGLPAGRT
EECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRSMMSLIRAPRGAVPSGSGSGSDQDRASDRRGSPATRRPLVRRRSEAVRPAGIIRSRL
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
AAASGVLAAAVVLASCSSGGGGTGPGQNEPPRPAAPTVTVTPADGAAGIALTESIVVKSN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECC
APLASVTVARGASPTEKTDPGTLEGTFSADRRTWTSAGGLFSDTRYDIQAATAPAQGLDG
CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCEEEEEECCCCCCCCC
TRNIASSFTTGVPDKAFKVSWEPVAGQTVGVGAPISLTFSAPVKDRAAVQSRLAVNADPP
HHHHHHHHHCCCCCCCEEEECCCCCCCEECCCCCEEEEEECCCCHHHHHHHHHEECCCCC
VLGAWNWMSDRMAVWRPQQYWAPGTKVHVEANLAGFDSGTGWIGVKDRSMDFAIGAAQIS
EEEECCCCCCCCEEECCHHHCCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEECHHHHH
KVDAATHVMQVFQNGQLVRTMPISGGKPGFLTMEGPHNVLGKAPMVIMDSATVGVPKGNP
HHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCHHHHCCCCEEEEECCEECCCCCCH
EYYYEEVQWAVHYTSGGQYVHSAPWSVASQGRANVSHGCVNASPADAQWFYNFSQFGDIV
HHEEEEEEEEEEECCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCHHEEECHHHCCCEE
DISNTGRPADTRQLGNEWSVPWDTWKAGSALPVDQPAASGALAGAAPGAGLPAGRT
EECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]