| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314078
Identifier: 158314078
GI number: 158314078
Start: 2683309
End: 2684508
Strand: Direct
Name: 158314078
Synonym: Franean1_2245
Alternate gene names: NA
Gene position: 2683309-2684508 (Clockwise)
Preceding gene: 158314077
Following gene: 158314079
Centisome position: 29.87
GC content: 72.25
Gene sequence:
>1200_bases GTGGATCGGACGAACCGGGACAGTCGTGCGGAACGGGAAGCTCCAACGGACCCGGACAGTCAGGCGGCCCGCGTGGATGA AGATGAAGCGGACCGTGCCGGCCTGTCGGAGGAGAACGACCTGACGATTCCGAGTGACGGGCCGGCTCGGAGTGGCGGGG CCGCTACCGCCGGTGGGGTGGCGCGGAGCGACGGGACGGATCGGATGGACCGGGGGGAGCGGGTGGACCGGGAACGTCGC GCGGAGGCGCCGGCGGGCCTGCCGACGCCTCCGCAAACAGGCCGGTTCCGTAACCCGGCGACCGGCCTGCCCAGGCTGTG GGTCGAGGCCGTCGTCCTGGTGGGGCTCTACTACGTCTACACGGCCACCCGTGGCGTGGCGGGCTCGTCGGTCGGCGCCG CGACCGACATGGGCTGGGACATCCTCCGCCTGCAGCAGCACCTGCACATCGACATCGAGCTCAGCCTCAACCGGTGGCTG CAGAGCATCCCGCCGCTGGCGGTCGCCTGCTGCTACTACTACTCGACCCTGCACTTCGTCGTCACGCCGGCGCTGCTGGT CTGGATGTACCGCCGCCACCCCGGCCGCTACATCCGGGCCCGGTGGGCCCTGGTCTTCACCACTCTGATCTCGCTGTGCG GCTTCTTCCTGTTCCCCACCGCCCCGCCCCGGCTCCTGCCCGGCACCTCGTATGTCGACACGATGTCGCACTTCGAGGCC TGGGGCTGGTGGAGCGGCGGCGCCAGCGCCGCTCCGGACGGCCTCGAGGGGCTGGCCAACCAGTACGCGGCCATGCCCTC GCTGCACTGCGCGTGGGCGCTGTGGTGCGGCTTCATGCTGGCCCGTTTCGCCCGCACACCCCTCGTTCGAGTGATCGGCT GTCTCTATCCCGCTGCGACCGTGTTCGTCGTGATGGCAACCTCGAACCACTACATCCTGGACGCCGTCGCCGGCTGGGCG GTGCTCGGCGTGAGCACGCTGCTCTCGCTGGCCATCACCGCCCGCGGCCGACGCCGGCCGGCCGAGGCTCCGCCGACTCC CGCTCCGGCTGCCGCCGTGGTGCACCGGCCTGCCGCGGTGCCTCTGCCCGCCGTGGCGAAGAAGGCGACGGTCGACGTGG CGACCGCCGACAGGGCCGCCGGGACCAAGGTGGCCGGGCGCCCGGGCCTGGAGCCTGACGTGGGCCAGGCCTCGGGCTGA
Upstream 100 bases:
>100_bases GCCACCCGCCCTCGTCGTTCGAGATCGGCCGTCCGTGATTGGCTGGACGGCACAAGCTGGACGGGGTGACGATGGCGGAC GGACCGGAAGTCGAGGCGTG
Downstream 100 bases:
>100_bases CCGGGAGCCTGGCTCAAGGCTGGTGGCTGGGTCGGTGGCCCGCCGGGCCGCCGGTAGGCCCTGCGGGCGGGTGGCGTTCC GTGGCCGTCCGATCGGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MDRTNRDSRAEREAPTDPDSQAARVDEDEADRAGLSEENDLTIPSDGPARSGGAATAGGVARSDGTDRMDRGERVDRERR AEAPAGLPTPPQTGRFRNPATGLPRLWVEAVVLVGLYYVYTATRGVAGSSVGAATDMGWDILRLQQHLHIDIELSLNRWL QSIPPLAVACCYYYSTLHFVVTPALLVWMYRRHPGRYIRARWALVFTTLISLCGFFLFPTAPPRLLPGTSYVDTMSHFEA WGWWSGGASAAPDGLEGLANQYAAMPSLHCAWALWCGFMLARFARTPLVRVIGCLYPAATVFVVMATSNHYILDAVAGWA VLGVSTLLSLAITARGRRRPAEAPPTPAPAAAVVHRPAAVPLPAVAKKATVDVATADRAAGTKVAGRPGLEPDVGQASG
Sequences:
>Translated_399_residues MDRTNRDSRAEREAPTDPDSQAARVDEDEADRAGLSEENDLTIPSDGPARSGGAATAGGVARSDGTDRMDRGERVDRERR AEAPAGLPTPPQTGRFRNPATGLPRLWVEAVVLVGLYYVYTATRGVAGSSVGAATDMGWDILRLQQHLHIDIELSLNRWL QSIPPLAVACCYYYSTLHFVVTPALLVWMYRRHPGRYIRARWALVFTTLISLCGFFLFPTAPPRLLPGTSYVDTMSHFEA WGWWSGGASAAPDGLEGLANQYAAMPSLHCAWALWCGFMLARFARTPLVRVIGCLYPAATVFVVMATSNHYILDAVAGWA VLGVSTLLSLAITARGRRRPAEAPPTPAPAAAVVHRPAAVPLPAVAKKATVDVATADRAAGTKVAGRPGLEPDVGQASG >Mature_399_residues MDRTNRDSRAEREAPTDPDSQAARVDEDEADRAGLSEENDLTIPSDGPARSGGAATAGGVARSDGTDRMDRGERVDRERR AEAPAGLPTPPQTGRFRNPATGLPRLWVEAVVLVGLYYVYTATRGVAGSSVGAATDMGWDILRLQQHLHIDIELSLNRWL QSIPPLAVACCYYYSTLHFVVTPALLVWMYRRHPGRYIRARWALVFTTLISLCGFFLFPTAPPRLLPGTSYVDTMSHFEA WGWWSGGASAAPDGLEGLANQYAAMPSLHCAWALWCGFMLARFARTPLVRVIGCLYPAATVFVVMATSNHYILDAVAGWA VLGVSTLLSLAITARGRRRPAEAPPTPAPAAAVVHRPAAVPLPAVAKKATVDVATADRAAGTKVAGRPGLEPDVGQASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42823; Mature: 42823
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTNRDSRAEREAPTDPDSQAARVDEDEADRAGLSEENDLTIPSDGPARSGGAATAGGV CCCCCCCHHHHHCCCCCCCCHHCCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCC ARSDGTDRMDRGERVDRERRAEAPAGLPTPPQTGRFRNPATGLPRLWVEAVVLVGLYYVY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH TATRGVAGSSVGAATDMGWDILRLQQHLHIDIELSLNRWLQSIPPLAVACCYYYSTLHFV HHHCCCCCCCCCCHHHCCHHHHHHHHHHCEEEEECHHHHHHHCCHHHHHHHHHHHHHHHH VTPALLVWMYRRHPGRYIRARWALVFTTLISLCGFFLFPTAPPRLLPGTSYVDTMSHFEA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH WGWWSGGASAAPDGLEGLANQYAAMPSLHCAWALWCGFMLARFARTPLVRVIGCLYPAAT CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH VFVVMATSNHYILDAVAGWAVLGVSTLLSLAITARGRRRPAEAPPTPAPAAAVVHRPAAV EEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC PLPAVAKKATVDVATADRAAGTKVAGRPGLEPDVGQASG CCHHHHHHHEEEEHHCCHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDRTNRDSRAEREAPTDPDSQAARVDEDEADRAGLSEENDLTIPSDGPARSGGAATAGGV CCCCCCCHHHHHCCCCCCCCHHCCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCC ARSDGTDRMDRGERVDRERRAEAPAGLPTPPQTGRFRNPATGLPRLWVEAVVLVGLYYVY CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH TATRGVAGSSVGAATDMGWDILRLQQHLHIDIELSLNRWLQSIPPLAVACCYYYSTLHFV HHHCCCCCCCCCCHHHCCHHHHHHHHHHCEEEEECHHHHHHHCCHHHHHHHHHHHHHHHH VTPALLVWMYRRHPGRYIRARWALVFTTLISLCGFFLFPTAPPRLLPGTSYVDTMSHFEA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH WGWWSGGASAAPDGLEGLANQYAAMPSLHCAWALWCGFMLARFARTPLVRVIGCLYPAAT CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH VFVVMATSNHYILDAVAGWAVLGVSTLLSLAITARGRRRPAEAPPTPAPAAAVVHRPAAV EEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCC PLPAVAKKATVDVATADRAAGTKVAGRPGLEPDVGQASG CCHHHHHHHEEEEHHCCHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA