| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314075
Identifier: 158314075
GI number: 158314075
Start: 2679088
End: 2680035
Strand: Direct
Name: 158314075
Synonym: Franean1_2242
Alternate gene names: NA
Gene position: 2679088-2680035 (Clockwise)
Preceding gene: 158314074
Following gene: 158314077
Centisome position: 29.83
GC content: 78.16
Gene sequence:
>948_bases GTGCCCCGCCTCCCGCCGGCGCGCCTTCTGGCACGCTCGGGCGGTATGAGCTGCGTCAGCCTGACGACCGACTACGGCCT GCTGGACGGTTTCGTCGCCGCGTGCCACGGCGTCCTGCTCCGGCTGGCCCCGGGGGTGCCGATCGTGGACGTGACCCACC TCGTGCCGCGCGGGGACGTCCGGCGCGGGGCCGCGGTCCTCGCTTCCACGGTGCGGCATCTGCCGCGTGGGGTCCACGTC GCCGTGGTCGATCCGGGGGTCGGCACCTCCCGGCGGGCGCTCGCCGCGCGCACGCCCGGTGGGTTCGTGGTCGGCCCCGA CAACGGGCTGCTCGTGCCCGCCGCAGAGGCCCTGGGCGGGCTGCTGGCGGCGGTGGACCTCACCATGCCCGAGGGCATCC CGGCGACCTTCCACGGCCGGGACGTCTTCGCGCCGGCGGCGGCCGCGCTGGCCACCGGCCGCCCCCTGGACGCGCTGGGC GAGCGGATCGATCCCGCGTCCGTGGTGCGGTTGCCCGAGCCGTTCGCCCGCGTGCTGCGCGGGCCCGCCGGGTCCCGGCT GGAGGCGGATGTCCTGACCGTGGACGGCTTCGGCAACGTGGCACTGGCCGCGGCGGCGGAGCTGCTCACCCAGGCCGACC TGCGGCCCGGCGACCGGGTCCGGCTGACCGCCGAGCGGGCCCGGCCGTCCGGCGAGCGGGTTCCGCCGACCGGCGGGCAG ATCCGGCCGTCCGGCGAGCGGCGAGCCGTGGGGGAGCCCGAGCTCGTGCCCGGGCCGGCGGGGCCGGTGGAGCTCGCCGT CGGCGTCACCTTCGGCTCCGTCGAGCCCGGGGAGCTGGTGCTCTACCTGGATTCGGGCGGTCTGGTCGCGGTGGCCCGCC GGGACGGCGACGCGGCGCGCAGCCTGTGGCTGGTGCCCGGGGACAGGGTGATCATCACCCCGGCCTGA
Upstream 100 bases:
>100_bases CGGCGAACTCGGCCTCGACCCGACCGAGATCGCCGACCTGCGCGCCGCCGGCGCGATCTGACGCCGGACCCCGGAGACAG ACCCGGGGCGGACGAGAAGC
Downstream 100 bases:
>100_bases GCCCACCGGGAACAGGTCGGTTCAGCAGAAGCCGGGCGTGCCGTACCAGGCGGCGGGGGCCTCCGGGACGTCGTCGCGCC GCACCGTGCCCTCGATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPRLPPARLLARSGGMSCVSLTTDYGLLDGFVAACHGVLLRLAPGVPIVDVTHLVPRGDVRRGAAVLASTVRHLPRGVHV AVVDPGVGTSRRALAARTPGGFVVGPDNGLLVPAAEALGGLLAAVDLTMPEGIPATFHGRDVFAPAAAALATGRPLDALG ERIDPASVVRLPEPFARVLRGPAGSRLEADVLTVDGFGNVALAAAAELLTQADLRPGDRVRLTAERARPSGERVPPTGGQ IRPSGERRAVGEPELVPGPAGPVELAVGVTFGSVEPGELVLYLDSGGLVAVARRDGDAARSLWLVPGDRVIITPA
Sequences:
>Translated_315_residues MPRLPPARLLARSGGMSCVSLTTDYGLLDGFVAACHGVLLRLAPGVPIVDVTHLVPRGDVRRGAAVLASTVRHLPRGVHV AVVDPGVGTSRRALAARTPGGFVVGPDNGLLVPAAEALGGLLAAVDLTMPEGIPATFHGRDVFAPAAAALATGRPLDALG ERIDPASVVRLPEPFARVLRGPAGSRLEADVLTVDGFGNVALAAAAELLTQADLRPGDRVRLTAERARPSGERVPPTGGQ IRPSGERRAVGEPELVPGPAGPVELAVGVTFGSVEPGELVLYLDSGGLVAVARRDGDAARSLWLVPGDRVIITPA >Mature_314_residues PRLPPARLLARSGGMSCVSLTTDYGLLDGFVAACHGVLLRLAPGVPIVDVTHLVPRGDVRRGAAVLASTVRHLPRGVHVA VVDPGVGTSRRALAARTPGGFVVGPDNGLLVPAAEALGGLLAAVDLTMPEGIPATFHGRDVFAPAAAALATGRPLDALGE RIDPASVVRLPEPFARVLRGPAGSRLEADVLTVDGFGNVALAAAAELLTQADLRPGDRVRLTAERARPSGERVPPTGGQI RPSGERRAVGEPELVPGPAGPVELAVGVTFGSVEPGELVLYLDSGGLVAVARRDGDAARSLWLVPGDRVIITPA
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 32220; Mature: 32088
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLPPARLLARSGGMSCVSLTTDYGLLDGFVAACHGVLLRLAPGVPIVDVTHLVPRGDV CCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCC RRGAAVLASTVRHLPRGVHVAVVDPGVGTSRRALAARTPGGFVVGPDNGLLVPAAEALGG HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCEEEEHHHHHHH LLAAVDLTMPEGIPATFHGRDVFAPAAAALATGRPLDALGERIDPASVVRLPEPFARVLR HHEEEEEECCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHCCCCCHHEEECCHHHHHHHC GPAGSRLEADVLTVDGFGNVALAAAAELLTQADLRPGDRVRLTAERARPSGERVPPTGGQ CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCE IRPSGERRAVGEPELVPGPAGPVELAVGVTFGSVEPGELVLYLDSGGLVAVARRDGDAAR ECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCC SLWLVPGDRVIITPA EEEEECCCEEEEECC >Mature Secondary Structure PRLPPARLLARSGGMSCVSLTTDYGLLDGFVAACHGVLLRLAPGVPIVDVTHLVPRGDV CCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCC RRGAAVLASTVRHLPRGVHVAVVDPGVGTSRRALAARTPGGFVVGPDNGLLVPAAEALGG HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCEEECCCCCEEEEHHHHHHH LLAAVDLTMPEGIPATFHGRDVFAPAAAALATGRPLDALGERIDPASVVRLPEPFARVLR HHEEEEEECCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHCCCCCHHEEECCHHHHHHHC GPAGSRLEADVLTVDGFGNVALAAAAELLTQADLRPGDRVRLTAERARPSGERVPPTGGQ CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCE IRPSGERRAVGEPELVPGPAGPVELAVGVTFGSVEPGELVLYLDSGGLVAVARRDGDAAR ECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCC SLWLVPGDRVIITPA EEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]