Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313933

Identifier: 158313933

GI number: 158313933

Start: 2523647

End: 2524591

Strand: Direct

Name: 158313933

Synonym: Franean1_2099

Alternate gene names: NA

Gene position: 2523647-2524591 (Clockwise)

Preceding gene: 158313932

Following gene: 158313934

Centisome position: 28.1

GC content: 73.33

Gene sequence:

>945_bases
GTGTTGAGCCGCATCGCGGAGTCGCTGTTCTGGATCGGCCGCTACGCGGAGCGGGCCGAGTGCACCGCGCGCATCCTGGA
CGTCCACGTCCATCGGGTGCTCGAGGACCCGTGGCTGGACGAGACGTCGGCCGGGGCCGAGCTGCTCGCCGTGATGGGCG
TCGCCGACCGGTCCGGCCCCGCCGACTCCCGGCATGTCACCGAGGTGCTCGCCTACGAGGCCGCGAACGCCTCCAGCATC
CGCGGGTCGCTCTCCGCGGCGCGGGAGAACGCCCGCGGTGCCCGTGTCGTGGTCTCCAGTGACGTGTGGGAGTGCCTGAA
CGTGACCTGGAACGACCTGCCGCACACCGAGGAGCTCGCCCGCCGGATGGGTCCGCACGTGTACTTCCGCTACGTGCGGG
AACGCACGGCGATGCTGGCCGGACTGGTCGACGCCACCCTCGCGCGCGACGACGGCTGGCGCTTCCTGGTGCTCGGGCGC
AGCCTGGAGCGGGTCGACATGACCGCCCGGCTGCTGTCGTCGAGCATCAGCGACGACCCGAGCTCGCAGAGCTGGGTCAG
CCTGCTGCGCTCGTGCGGCGCGCACGAGGCCTACCTGCGCACCTACCGGCGGGCGGTGGACGCGGCCCGGGTCGCGGAGT
TCCTGCTGCTGGACCGGCTCTTCCCGCGGTCGATCTACTGGTCGCTGGCGCTCGCGGAGCAGATCCTCGCCGAGCTGGAC
ACCAGCCGCGGCCTGGTCCGGGCGACCGTGGACGACGCCGCCCGGCGCACCGTCGGGCGGGCCCGCACCGAGCTGGAGTT
CCGCAGCATCGACGAGCTCGTCGCCGAGATGCCCGACCTGCTGGCCGCCCTGCAACGGACCTGCTCGGCGGTCAGCGCGG
CCGTCACCACCCGGTACTTCGCCCGGGACAGCCCGCGCACCTGGGCGAGCGAGGTGCCCGCCTGA

Upstream 100 bases:

>100_bases
TCGCCGCCGGGCCCGACCTCGGCCCGCACTCGTCCGACGAGCAGCAGCAACAGCAGTCCGAGCAGCAGAACCAGCAGCAG
AACCAGCAGGGGGACGGGCT

Downstream 100 bases:

>100_bases
CGAGGGGCGGAGAACAGCAACGGGCGACAGCTGCGCGCAGCGCCGCACACAAGGGAGACAGGCGACGATGAGCTGGCAGA
TCCGGATCGAGCACTCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGPADSRHVTEVLAYEAANASSI
RGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELARRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGR
SLERVDMTARLLSSSISDDPSSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD
TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYFARDSPRTWASEVPA

Sequences:

>Translated_314_residues
MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGPADSRHVTEVLAYEAANASSI
RGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELARRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGR
SLERVDMTARLLSSSISDDPSSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD
TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYFARDSPRTWASEVPA
>Mature_314_residues
MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGPADSRHVTEVLAYEAANASSI
RGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELARRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGR
SLERVDMTARLLSSSISDDPSSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD
TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYFARDSPRTWASEVPA

Specific function: Unknown

COG id: COG2307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007296
- InterPro:   IPR007297
- InterPro:   IPR007302 [H]

Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 35012; Mature: 35012

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
ADSRHVTEVLAYEAANASSIRGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCCHHHHH
RRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGRSLERVDMTARLLSSSISDDP
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
SSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYF
HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARDSPRTWASEVPA
HCCCCCCCHHCCCC
>Mature Secondary Structure
MLSRIAESLFWIGRYAERAECTARILDVHVHRVLEDPWLDETSAGAELLAVMGVADRSGP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
ADSRHVTEVLAYEAANASSIRGSLSAARENARGARVVVSSDVWECLNVTWNDLPHTEELA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCCHHHHH
RRMGPHVYFRYVRERTAMLAGLVDATLARDDGWRFLVLGRSLERVDMTARLLSSSISDDP
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
SSQSWVSLLRSCGAHEAYLRTYRRAVDAARVAEFLLLDRLFPRSIYWSLALAEQILAELD
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSRGLVRATVDDAARRTVGRARTELEFRSIDELVAEMPDLLAALQRTCSAVSAAVTTRYF
HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARDSPRTWASEVPA
HCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]