Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158313597

Identifier: 158313597

GI number: 158313597

Start: 2111389

End: 2112120

Strand: Direct

Name: 158313597

Synonym: Franean1_1761

Alternate gene names: NA

Gene position: 2111389-2112120 (Clockwise)

Preceding gene: 158313596

Following gene: 158313599

Centisome position: 23.51

GC content: 77.19

Gene sequence:

>732_bases
GTGGACGTCCCCGCTGTAGTCCGGCGCGTGGTCTCCCTGGTGCCGAGCCTGACCGAGTCCGTCGCGGCGACGGCGCCCGG
CCTGCTGGTGGGTGCCACCGACTGGTGCTCCCGGCCGGCGGACCTGGCCGTGACGCGAGTGCGCGGCACGAAGAACCCGG
ACATCGCGGCGATCGTGGCGCTGGCGCCGGACGTCGTCTGCGTAAACGCCGAGGAGAACCGGCAGCCGGACCTGGACGCG
CTGCGGGCGGCCGGGCTCGCCGTCTGGGTGACGGCGCCGACCACCGTGCCCGCGGCCCTGCGCAGCCTCGACCGCCTGCT
GCGCCTGGCCTGCCGGCTGCCCCGTCCCAGCTGGCTGGAGACGGCGGAGCGGGTCTGGGCGGCGCCGAGCGACGGCCCGC
GCCGGCGCGCCGTCGTCCCGATCTGGCGCCGGCCGTGGATGGCGCTCGGCCGCGACACGTTCGCCGGTGACCTGCTGGCC
CGGCTCGGGGTCGACAACGCCCTCGCCGGGGCGGACGAGCGCTACCCGCGGGTGGATCTCGACACGCTGCCCGCACATGA
TCTCGTGGTGCTGCCCGACGAGCCGTACGCGTTCAGCCCGTCGGACGGGCCGGAGGCGTTCGCCGCGCCCGCGGTGTGCG
TCTCCGGCCGGCTCCTCACCTGGTACGGGCCGTCGCTGGTCGAGGCCCGCGCGGAGCTGTCCACCGCGCTCGCCGCGGCC
CCCCGGCCCTGA

Upstream 100 bases:

>100_bases
CATCTCGGTCAACCGCCGCTACAAGGCGCACGCCGGCCTGCGCGTCACCGACGTCTGAGCGGGCGTCCACCCCGTGCCGG
TCGACGATCTTGGTGAGCGG

Downstream 100 bases:

>100_bases
CGGCGAACACCGGGACGGCGGGACGGCGGGACGAACGTCGCTGGACAGCGGGCGGCGGGACGAACGGCGGGGCAGTGGGC
CCCGGGTGCGGGCCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDVPAVVRRVVSLVPSLTESVAATAPGLLVGATDWCSRPADLAVTRVRGTKNPDIAAIVALAPDVVCVNAEENRQPDLDA
LRAAGLAVWVTAPTTVPAALRSLDRLLRLACRLPRPSWLETAERVWAAPSDGPRRRAVVPIWRRPWMALGRDTFAGDLLA
RLGVDNALAGADERYPRVDLDTLPAHDLVVLPDEPYAFSPSDGPEAFAAPAVCVSGRLLTWYGPSLVEARAELSTALAAA
PRP

Sequences:

>Translated_243_residues
MDVPAVVRRVVSLVPSLTESVAATAPGLLVGATDWCSRPADLAVTRVRGTKNPDIAAIVALAPDVVCVNAEENRQPDLDA
LRAAGLAVWVTAPTTVPAALRSLDRLLRLACRLPRPSWLETAERVWAAPSDGPRRRAVVPIWRRPWMALGRDTFAGDLLA
RLGVDNALAGADERYPRVDLDTLPAHDLVVLPDEPYAFSPSDGPEAFAAPAVCVSGRLLTWYGPSLVEARAELSTALAAA
PRP
>Mature_243_residues
MDVPAVVRRVVSLVPSLTESVAATAPGLLVGATDWCSRPADLAVTRVRGTKNPDIAAIVALAPDVVCVNAEENRQPDLDA
LRAAGLAVWVTAPTTVPAALRSLDRLLRLACRLPRPSWLETAERVWAAPSDGPRRRAVVPIWRRPWMALGRDTFAGDLLA
RLGVDNALAGADERYPRVDLDTLPAHDLVVLPDEPYAFSPSDGPEAFAAPAVCVSGRLLTWYGPSLVEARAELSTALAAA
PRP

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25913; Mature: 25913

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVPAVVRRVVSLVPSLTESVAATAPGLLVGATDWCSRPADLAVTRVRGTKNPDIAAIVA
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHHHEEEEECCCCCCCCEEEEE
LAPDVVCVNAEENRQPDLDALRAAGLAVWVTAPTTVPAALRSLDRLLRLACRLPRPSWLE
ECCCEEEECCCCCCCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
TAERVWAAPSDGPRRRAVVPIWRRPWMALGRDTFAGDLLARLGVDNALAGADERYPRVDL
HHHHHHCCCCCCCCCCEEEEHHCCCHHHHCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC
DTLPAHDLVVLPDEPYAFSPSDGPEAFAAPAVCVSGRLLTWYGPSLVEARAELSTALAAA
CCCCCCCEEEECCCCCEECCCCCCHHHHCCHHHHCCEEEEEECHHHHHHHHHHHHHHHCC
PRP
CCC
>Mature Secondary Structure
MDVPAVVRRVVSLVPSLTESVAATAPGLLVGATDWCSRPADLAVTRVRGTKNPDIAAIVA
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHHHEEEEECCCCCCCCEEEEE
LAPDVVCVNAEENRQPDLDALRAAGLAVWVTAPTTVPAALRSLDRLLRLACRLPRPSWLE
ECCCEEEECCCCCCCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHH
TAERVWAAPSDGPRRRAVVPIWRRPWMALGRDTFAGDLLARLGVDNALAGADERYPRVDL
HHHHHHCCCCCCCCCCEEEEHHCCCHHHHCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCC
DTLPAHDLVVLPDEPYAFSPSDGPEAFAAPAVCVSGRLLTWYGPSLVEARAELSTALAAA
CCCCCCCEEEECCCCCEECCCCCCHHHHCCHHHHCCEEEEEECHHHHHHHHHHHHHHHCC
PRP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA