| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fno [H]
Identifier: 158313596
GI number: 158313596
Start: 2110663
End: 2111346
Strand: Direct
Name: fno [H]
Synonym: Franean1_1760
Alternate gene names: 158313596
Gene position: 2110663-2111346 (Clockwise)
Preceding gene: 158313594
Following gene: 158313597
Centisome position: 23.5
GC content: 72.22
Gene sequence:
>684_bases GTGAGCTCAGCATCGACGCCTCTTCCGGACGTCTCCTCGCTCGTGATCGGCATCCTCGGCGGTTCGGGGCCGCAGGGCGG CGGGCTCGCCGTCCGCTTCGCGATGGCGGGTCACCAGGTCCTCGTCGGGTCGCGCTCGGCCGAGCGCGGCCGGGAGGCGG CCGCGAAGCTGGCCGCGTCCGGGCGGAACATCTCCGGCGGCGACAACGCCGACGTCGCCGAGCGGGCCGACGTCGTGATC GTCGCCGTCCCGTGGGAGGGGCACGGCGAGCTGCTGGCCGACCTGCGCAAGCAGCTGGCCGGCAAGATCGTGATCGACTG CGTGAACCCGATGGGCTTCGACAAGGGTGGCGCGTTCGCGCTGCCCGTCGCCGAGGGCAGCGCCGCGCAGCAGGCCGCCG CCGTGCTGGCGGACAGCACCGTCGTCGGCGCCTTCCACCACGTGTCGGCTGTCCTGCTCATGGACGAGTCCGTCGAGTCG ATCGACACCGACATCCTGGTCATCGGCGACGACCGCTCCGCGACCGACACGGTGATCGCGCTGGCGAACCGGATCACCGG GATGCGCGGCATCTACGCCGGCAAGCTGCGCAACGCCGGCCAGGTCGAGGCGCTCACCGCCAACCTCATCTCGGTCAACC GCCGCTACAAGGCGCACGCCGGCCTGCGCGTCACCGACGTCTGA
Upstream 100 bases:
>100_bases CGGGCCGGCGCTCGTCGGGTCGCGAACCCCGAATTGGGAGCGGGGTCACAGGGTGTGACGGTGGTCGGCACGTGGAGCGG GTTTCGGGCAGGATGGCCCG
Downstream 100 bases:
>100_bases GCGGGCGTCCACCCCGTGCCGGTCGACGATCTTGGTGAGCGGGTGGACGTCCCCGCTGTAGTCCGGCGCGTGGTCTCCCT GGTGCCGAGCCTGACCGAGT
Product: NADPH-dependent F420 reductase
Products: NA
Alternate protein names: F420H2:NADP oxidoreductase [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSSASTPLPDVSSLVIGILGGSGPQGGGLAVRFAMAGHQVLVGSRSAERGREAAAKLAASGRNISGGDNADVAERADVVI VAVPWEGHGELLADLRKQLAGKIVIDCVNPMGFDKGGAFALPVAEGSAAQQAAAVLADSTVVGAFHHVSAVLLMDESVES IDTDILVIGDDRSATDTVIALANRITGMRGIYAGKLRNAGQVEALTANLISVNRRYKAHAGLRVTDV
Sequences:
>Translated_227_residues MSSASTPLPDVSSLVIGILGGSGPQGGGLAVRFAMAGHQVLVGSRSAERGREAAAKLAASGRNISGGDNADVAERADVVI VAVPWEGHGELLADLRKQLAGKIVIDCVNPMGFDKGGAFALPVAEGSAAQQAAAVLADSTVVGAFHHVSAVLLMDESVES IDTDILVIGDDRSATDTVIALANRITGMRGIYAGKLRNAGQVEALTANLISVNRRYKAHAGLRVTDV >Mature_226_residues SSASTPLPDVSSLVIGILGGSGPQGGGLAVRFAMAGHQVLVGSRSAERGREAAAKLAASGRNISGGDNADVAERADVVIV AVPWEGHGELLADLRKQLAGKIVIDCVNPMGFDKGGAFALPVAEGSAAQQAAAVLADSTVVGAFHHVSAVLLMDESVESI DTDILVIGDDRSATDTVIALANRITGMRGIYAGKLRNAGQVEALTANLISVNRRYKAHAGLRVTDV
Specific function: Catalyzes the reduction of NADP(+) with F420H(2) via hydride transfer, and the reverse reaction, i.e. the reduction of F420 with NADPH. Probably functions in the regeneration of NADPH required in biosynthetic reactions [H]
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the F420-dependent NADP reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR004455 - InterPro: IPR010185 [H]
Pfam domain/function: PF03807 F420_oxidored [H]
EC number: NA
Molecular weight: Translated: 23160; Mature: 23028
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSASTPLPDVSSLVIGILGGSGPQGGGLAVRFAMAGHQVLVGSRSAERGREAAAKLAAS CCCCCCCCCCHHHHHEEEECCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHC GRNISGGDNADVAERADVVIVAVPWEGHGELLADLRKQLAGKIVIDCVNPMGFDKGGAFA CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEE LPVAEGSAAQQAAAVLADSTVVGAFHHVSAVLLMDESVESIDTDILVIGDDRSATDTVIA EEECCCCHHHHHHHHHHCCHHHHHHHHHEEEEEECCCHHHCCCCEEEEECCCCCHHHHHH LANRITGMRGIYAGKLRNAGQVEALTANLISVNRRYKAHAGLRVTDV HHHHHCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCHHCCCEEEECC >Mature Secondary Structure SSASTPLPDVSSLVIGILGGSGPQGGGLAVRFAMAGHQVLVGSRSAERGREAAAKLAAS CCCCCCCCCHHHHHEEEECCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHC GRNISGGDNADVAERADVVIVAVPWEGHGELLADLRKQLAGKIVIDCVNPMGFDKGGAFA CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEE LPVAEGSAAQQAAAVLADSTVVGAFHHVSAVLLMDESVESIDTDILVIGDDRSATDTVIA EEECCCCHHHHHHHHHHCCHHHHHHHHHEEEEEECCCHHHCCCCEEEEECCCCCHHHHHH LANRITGMRGIYAGKLRNAGQVEALTANLISVNRRYKAHAGLRVTDV HHHHHCCCCCEEHHCCCCCCCHHHHHHHHHHHCCCCHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]