| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is dut [H]
Identifier: 157963650
GI number: 157963650
Start: 4666089
End: 4666547
Strand: Direct
Name: dut [H]
Synonym: Spea_3839
Alternate gene names: 157963650
Gene position: 4666089-4666547 (Clockwise)
Preceding gene: 157963649
Following gene: 157963651
Centisome position: 90.17
GC content: 48.37
Gene sequence:
>459_bases ATGAAAACACCAATCGAATTAAAGATTTTAGACTCACGCATCGGCACCGAGTTTCCACTTCCTGCTTACGCCACACCAGG CAGTGCAGGCATGGATCTTCGCGCCATCACAGATACCCAACTTGTTATCCAGCCGGGTGAAACAGTGCTAATCCCTACGG GAATTGCCATTCACGTTGCAGACCCTAGCCTAGCGGCAATTATTTTACCGCGCTCAGGATTAGGCCATAAGCACGGCATC GTTCTAGGCAATCTAGTTGGACTTATCGATTCGGATTATCAAGGACCTCTAATGGTTTCTTGCTGGAACCGTGGCAGTGA GCCTTTTACAATCGAAATCGGTGACAGACTCGCGCAATTGGTCTTTGTACCGGTTGTTCAGGCTGAATTTAAACTGGTAG ACGAGTTTAATCAGTCAGATCGCGGCGCAGGTGGATTTGGCCACTCAGGAACCAAATAA
Upstream 100 bases:
>100_bases GCGTATTTTGGAGTGATGGTAGCACCGACCTACCCGCTGTTGATAAAGACACTTTAGCCAAGCAATTGCTTACTCTAATA GCGAACAAAATAAAAAACTG
Downstream 100 bases:
>100_bases CTGATTGTTTAGCTTTTTACGCAATCACTTTTAATGGATAGCATGGAGCAATGTTTCCTTGCCGTCTCGCTCAGTAGTAA TCGAGTGAAGGACAGATAAA
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKTPIELKILDSRIGTEFPLPAYATPGSAGMDLRAITDTQLVIQPGETVLIPTGIAIHVADPSLAAIILPRSGLGHKHGI VLGNLVGLIDSDYQGPLMVSCWNRGSEPFTIEIGDRLAQLVFVPVVQAEFKLVDEFNQSDRGAGGFGHSGTK
Sequences:
>Translated_152_residues MKTPIELKILDSRIGTEFPLPAYATPGSAGMDLRAITDTQLVIQPGETVLIPTGIAIHVADPSLAAIILPRSGLGHKHGI VLGNLVGLIDSDYQGPLMVSCWNRGSEPFTIEIGDRLAQLVFVPVVQAEFKLVDEFNQSDRGAGGFGHSGTK >Mature_152_residues MKTPIELKILDSRIGTEFPLPAYATPGSAGMDLRAITDTQLVIQPGETVLIPTGIAIHVADPSLAAIILPRSGLGHKHGI VLGNLVGLIDSDYQGPLMVSCWNRGSEPFTIEIGDRLAQLVFVPVVQAEFKLVDEFNQSDRGAGGFGHSGTK
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=145, Percent_Identity=34.4827586206897, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI4503423, Length=145, Percent_Identity=34.4827586206897, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI70906441, Length=145, Percent_Identity=34.4827586206897, Blast_Score=77, Evalue=8e-15, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=69.5945945945946, Blast_Score=225, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71988561, Length=154, Percent_Identity=33.7662337662338, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319729, Length=84, Percent_Identity=45.2380952380952, Blast_Score=72, Evalue=3e-14, Organism=Drosophila melanogaster, GI24583610, Length=132, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921126, Length=132, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16144; Mature: 16144
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPIELKILDSRIGTEFPLPAYATPGSAGMDLRAITDTQLVIQPGETVLIPTGIAIHVA CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCEEEEEC DPSLAAIILPRSGLGHKHGIVLGNLVGLIDSDYQGPLMVSCWNRGSEPFTIEIGDRLAQL CCCEEEEEEECCCCCCCCCEEEEHEEEEECCCCCCCEEEEEECCCCCCEEEEHHHHHHHH VFVPVVQAEFKLVDEFNQSDRGAGGFGHSGTK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTPIELKILDSRIGTEFPLPAYATPGSAGMDLRAITDTQLVIQPGETVLIPTGIAIHVA CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCEEEEECCEEEEEC DPSLAAIILPRSGLGHKHGIVLGNLVGLIDSDYQGPLMVSCWNRGSEPFTIEIGDRLAQL CCCEEEEEEECCCCCCCCCEEEEHEEEEECCCCCCCEEEEEECCCCCCEEEEHHHHHHHH VFVPVVQAEFKLVDEFNQSDRGAGGFGHSGTK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA