Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962828

Identifier: 157962828

GI number: 157962828

Start: 3689943

End: 3690785

Strand: Reverse

Name: 157962828

Synonym: Spea_3010

Alternate gene names: NA

Gene position: 3690785-3689943 (Counterclockwise)

Preceding gene: 157962830

Following gene: 157962827

Centisome position: 71.33

GC content: 46.03

Gene sequence:

>843_bases
ATGTCTACAGAGCATCAAGTATTAGTTGGTTTGTTAAAAAAATTAAAGTCCGACGCCTTAGTTTTACCTACATTGCCAGA
GGTTGCGATGCGGGTGCAGGAGGTGGTGGGTCAAGAAGATGCCAGCCTAAAAGATGTTGCTAGTATTATTGGTCAAGATG
CGGCTATTTCAGCTAGGGTCATCCGTATCGCGAATAGCGCCATGTACAGTCGGGGGATCCCTGCTGATAACGTCAATGCG
GCCATAAACCGTATTGGCTTGACTCAGATTAAATCCATTGTGACTTCTATTGCGATGGAGCAGCTGTTTATCTCTACCAA
CCAAATGGTTTGGGAGGTAATGGATGAGGTATGGAGTGCATCTATCGACGTGACCTCTGCCGCTTGTGCCATGCTACAGA
TTTATAATAAGAAGCTCCCAGAGAGTAAGCTTAACTTTGACACTATGACGCTTGCTGGCCTGGTGCATAATATCGGTGCC
TTGCCAGTGTTGACAGAAGCTGAAGCTCAGCCTGAACTCTTTGATAGCATAGATCTATTACGTGCTTTAGTTAAGAAGTT
ACAAGGCCCATTAGGGCGCGCCGTGTTAAAGAGCTGGGAGTTTTCGCCAGATGTGATGCAAGTGGTAGAACGTTGGGCAG
ATCTAACCTATACCTCGGAACAAGTGAGTTACCTAGACTTTATTCGCGCGGCGGCTTTCTATACCGGAGAGTTAAGGGCG
GGAGACGATTTAGAACAAAGGATGACAGCCTTTATCGAGCGTGGTTTACCTGTATCGGCTGAAGAATTAGCGAGTGATGC
ATTCCAAGAGGCTTATCAATCTATCAAGGCAAGTTACGAATAA

Upstream 100 bases:

>100_bases
TTAAGTATTGACCCATAAATAGCATTTTGCACGTACCTCAAAGCGTTCAACTGTTATACTCGATTTGCTGCAAATTAATA
CGAGTTATAAGGGAGTTGAG

Downstream 100 bases:

>100_bases
TTTAGATGTTTGAATAGCGATGCTATGAAACTTAAACGATAGTGTTTGCTGGCGTAAGGACTAGCAGGCACTATAGTTTA
TAACAGAATAAATTGAGATT

Product: putative signal transduction protein

Products: NA

Alternate protein names: Metal Dependent Phosphohydrolase; HDOD Domain Family; Sensor Histidine Kinase; Cytoplasmic Protein; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; Histidine Kinase; HDIG Domain-Containing Protein; Diguanylate Cyclase; Metal-Dependent Phosphoesterase; Metal-Dependent Hydrolase HDOD; Fis Family Transcriptional Regulator; Hdod Domain Family Protein

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSTEHQVLVGLLKKLKSDALVLPTLPEVAMRVQEVVGQEDASLKDVASIIGQDAAISARVIRIANSAMYSRGIPADNVNA
AINRIGLTQIKSIVTSIAMEQLFISTNQMVWEVMDEVWSASIDVTSAACAMLQIYNKKLPESKLNFDTMTLAGLVHNIGA
LPVLTEAEAQPELFDSIDLLRALVKKLQGPLGRAVLKSWEFSPDVMQVVERWADLTYTSEQVSYLDFIRAAAFYTGELRA
GDDLEQRMTAFIERGLPVSAEELASDAFQEAYQSIKASYE

Sequences:

>Translated_280_residues
MSTEHQVLVGLLKKLKSDALVLPTLPEVAMRVQEVVGQEDASLKDVASIIGQDAAISARVIRIANSAMYSRGIPADNVNA
AINRIGLTQIKSIVTSIAMEQLFISTNQMVWEVMDEVWSASIDVTSAACAMLQIYNKKLPESKLNFDTMTLAGLVHNIGA
LPVLTEAEAQPELFDSIDLLRALVKKLQGPLGRAVLKSWEFSPDVMQVVERWADLTYTSEQVSYLDFIRAAAFYTGELRA
GDDLEQRMTAFIERGLPVSAEELASDAFQEAYQSIKASYE
>Mature_279_residues
STEHQVLVGLLKKLKSDALVLPTLPEVAMRVQEVVGQEDASLKDVASIIGQDAAISARVIRIANSAMYSRGIPADNVNAA
INRIGLTQIKSIVTSIAMEQLFISTNQMVWEVMDEVWSASIDVTSAACAMLQIYNKKLPESKLNFDTMTLAGLVHNIGAL
PVLTEAEAQPELFDSIDLLRALVKKLQGPLGRAVLKSWEFSPDVMQVVERWADLTYTSEQVSYLDFIRAAAFYTGELRAG
DDLEQRMTAFIERGLPVSAEELASDAFQEAYQSIKASYE

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30789; Mature: 30657

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEHQVLVGLLKKLKSDALVLPTLPEVAMRVQEVVGQEDASLKDVASIIGQDAAISARV
CCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
IRIANSAMYSRGIPADNVNAAINRIGLTQIKSIVTSIAMEQLFISTNQMVWEVMDEVWSA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SIDVTSAACAMLQIYNKKLPESKLNFDTMTLAGLVHNIGALPVLTEAEAQPELFDSIDLL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH
RALVKKLQGPLGRAVLKSWEFSPDVMQVVERWADLTYTSEQVSYLDFIRAAAFYTGELRA
HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
GDDLEQRMTAFIERGLPVSAEELASDAFQEAYQSIKASYE
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STEHQVLVGLLKKLKSDALVLPTLPEVAMRVQEVVGQEDASLKDVASIIGQDAAISARV
CCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
IRIANSAMYSRGIPADNVNAAINRIGLTQIKSIVTSIAMEQLFISTNQMVWEVMDEVWSA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SIDVTSAACAMLQIYNKKLPESKLNFDTMTLAGLVHNIGALPVLTEAEAQPELFDSIDLL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH
RALVKKLQGPLGRAVLKSWEFSPDVMQVVERWADLTYTSEQVSYLDFIRAAAFYTGELRA
HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
GDDLEQRMTAFIERGLPVSAEELASDAFQEAYQSIKASYE
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA