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The map label for this gene is 157962830

Identifier: 157962830

GI number: 157962830

Start: 3692546

End: 3693790

Strand: Reverse

Name: 157962830

Synonym: Spea_3012

Alternate gene names: NA

Gene position: 3693790-3692546 (Counterclockwise)

Preceding gene: 157962831

Following gene: 157962828

Centisome position: 71.38

GC content: 45.06

Gene sequence:

>1245_bases
ATGAATAAGCTACGTTTAACCATTTTATTAGGGGGGAGTCTTGCTTGTGTTGGCAGTCTTTTTAGCATTGATAGTTATGC
CAGTACCAGCTTTGGTAGCCCAAATACTGTCGATAACACTATTAAAGATAACACCCGTAAGAAAGAGTCTTGGCGAGAAA
AGCTAGCCAGTGAGCATAACCTGACTTTGGGACTGGATTATCAAGTGCTTGGGTTGTCGGCAAGTTCACCTACCGCAGGT
GGTGATGATAATTCTGCGGCGGGTGTGGTTCGATTTTATGGCTCTTGGAACTTAACTGGGTTAGAGAGCGGCAATGTCGG
TGGTCTGGTGTGGAAAGTTGAGCATCGACATGCTTATACCGATACCGCTCCAAAAGCCTATTCATTTATTGAGCCGGGAC
TTGGCTATATCGGCATGATAGGGCCTGCATATAGCGACCAAGGTGGGCGACTCACCAACCTTTATTGGAAGCAGCAATTC
AATCAAGGAAAAACCGCATTAATGGCGGGCTACTTAGATACATCAGATTATGTTGATACCTACGCGTTAGCGAGCCCGTG
GACAGGGTTTACCAATTTGGCATTTAGTACCGGCGCGGGCGCAATAGGTTTACCCGATGACGGGGTTTTAGGTTTGGCTG
TTGGCCATATGCTCGATGACAACTTTTATATTATTGCCGGCGCAGCCGACGCGAAAGGGCGCTCAGATAAACCAAGTGAC
GGCTTTGAGACTTTGTTTAATGACCATAAGCTGTTTACCACATTTGAATTAGGTTGGACTGCGTCACAGGAACATATCTA
TACCGATAATGTCCATGTGACTCTGTGGCATATGGACGGCGGCACTCAACATAATCTCACTCAGCCAAGTGAAAGTGGCC
AAGGGATAAACTTTTCTGCTAGCTTCTTTGTTACGCCTCAATTAATGCCGTTTGTTAGAGGCGGTATATCACAGGGCGAT
GTCGCACTGTACGATAATTCGTTAACAATGGGGCTTGGCTATTTTGGTTTAGGCGGTGAGAAAAATAACTTAGGCTTTGC
GATTAACTTCAGTGAAGTCAATGAGAATTTAGGCAAGGCCTATGGCGTTACTGACGACAAGCAATTTACTTCTGAGGTGT
ATTACAACATGAGTTTGGGGGAATTTGTGCAGTTAACCCCTAATATTCAGTATATCGACAATCCAGCGATTTCAACTGAG
GATGATACTTGGGTTATTGGCTTAAGAGCCAGGGTGAGTTTTTAA

Upstream 100 bases:

>100_bases
CTGTCACGGGCTTAGAACTGCAAGATAGCCTAGATCATAAAGGGCACGCTCACTAATTGATTTATGCAAAGGGAATGAAA
GGTAAACAAGGATAATCAGT

Downstream 100 bases:

>100_bases
TTAACGGTTAATGTAATGAACCCACCTACTGAAGTAGGTGGTTTAGGGCTGAAAACAAAAAAGGCCTCAAAATTGAGGCC
TTTCATCAAGTTCAGCGCTA

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: Carbohydrate-Selective Porin OprB Family

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNKLRLTILLGGSLACVGSLFSIDSYASTSFGSPNTVDNTIKDNTRKKESWREKLASEHNLTLGLDYQVLGLSASSPTAG
GDDNSAAGVVRFYGSWNLTGLESGNVGGLVWKVEHRHAYTDTAPKAYSFIEPGLGYIGMIGPAYSDQGGRLTNLYWKQQF
NQGKTALMAGYLDTSDYVDTYALASPWTGFTNLAFSTGAGAIGLPDDGVLGLAVGHMLDDNFYIIAGAADAKGRSDKPSD
GFETLFNDHKLFTTFELGWTASQEHIYTDNVHVTLWHMDGGTQHNLTQPSESGQGINFSASFFVTPQLMPFVRGGISQGD
VALYDNSLTMGLGYFGLGGEKNNLGFAINFSEVNENLGKAYGVTDDKQFTSEVYYNMSLGEFVQLTPNIQYIDNPAISTE
DDTWVIGLRARVSF

Sequences:

>Translated_414_residues
MNKLRLTILLGGSLACVGSLFSIDSYASTSFGSPNTVDNTIKDNTRKKESWREKLASEHNLTLGLDYQVLGLSASSPTAG
GDDNSAAGVVRFYGSWNLTGLESGNVGGLVWKVEHRHAYTDTAPKAYSFIEPGLGYIGMIGPAYSDQGGRLTNLYWKQQF
NQGKTALMAGYLDTSDYVDTYALASPWTGFTNLAFSTGAGAIGLPDDGVLGLAVGHMLDDNFYIIAGAADAKGRSDKPSD
GFETLFNDHKLFTTFELGWTASQEHIYTDNVHVTLWHMDGGTQHNLTQPSESGQGINFSASFFVTPQLMPFVRGGISQGD
VALYDNSLTMGLGYFGLGGEKNNLGFAINFSEVNENLGKAYGVTDDKQFTSEVYYNMSLGEFVQLTPNIQYIDNPAISTE
DDTWVIGLRARVSF
>Mature_414_residues
MNKLRLTILLGGSLACVGSLFSIDSYASTSFGSPNTVDNTIKDNTRKKESWREKLASEHNLTLGLDYQVLGLSASSPTAG
GDDNSAAGVVRFYGSWNLTGLESGNVGGLVWKVEHRHAYTDTAPKAYSFIEPGLGYIGMIGPAYSDQGGRLTNLYWKQQF
NQGKTALMAGYLDTSDYVDTYALASPWTGFTNLAFSTGAGAIGLPDDGVLGLAVGHMLDDNFYIIAGAADAKGRSDKPSD
GFETLFNDHKLFTTFELGWTASQEHIYTDNVHVTLWHMDGGTQHNLTQPSESGQGINFSASFFVTPQLMPFVRGGISQGD
VALYDNSLTMGLGYFGLGGEKNNLGFAINFSEVNENLGKAYGVTDDKQFTSEVYYNMSLGEFVQLTPNIQYIDNPAISTE
DDTWVIGLRARVSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44840; Mature: 44840

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLRLTILLGGSLACVGSLFSIDSYASTSFGSPNTVDNTIKDNTRKKESWREKLASEHN
CCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCC
LTLGLDYQVLGLSASSPTAGGDDNSAAGVVRFYGSWNLTGLESGNVGGLVWKVEHRHAYT
EEEEECEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCC
DTAPKAYSFIEPGLGYIGMIGPAYSDQGGRLTNLYWKQQFNQGKTALMAGYLDTSDYVDT
CCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEHHHHHCCCCCEEEEEEECCCCHHHHH
YALASPWTGFTNLAFSTGAGAIGLPDDGVLGLAVGHMLDDNFYIIAGAADAKGRSDKPSD
HECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHEECCCEEEEEECCCCCCCCCCCCC
GFETLFNDHKLFTTFELGWTASQEHIYTDNVHVTLWHMDGGTQHNLTQPSESGQGINFSA
HHHHHHCCCEEEEEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEE
SFFVTPQLMPFVRGGISQGDVALYDNSLTMGLGYFGLGGEKNNLGFAINFSEVNENLGKA
EEEECCCHHHHHHCCCCCCCEEEEECCEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHH
YGVTDDKQFTSEVYYNMSLGEFVQLTPNIQYIDNPAISTEDDTWVIGLRARVSF
CCCCCCHHHHHHEEEECCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MNKLRLTILLGGSLACVGSLFSIDSYASTSFGSPNTVDNTIKDNTRKKESWREKLASEHN
CCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCC
LTLGLDYQVLGLSASSPTAGGDDNSAAGVVRFYGSWNLTGLESGNVGGLVWKVEHRHAYT
EEEEECEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECCCCCC
DTAPKAYSFIEPGLGYIGMIGPAYSDQGGRLTNLYWKQQFNQGKTALMAGYLDTSDYVDT
CCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEHHHHHCCCCCEEEEEEECCCCHHHHH
YALASPWTGFTNLAFSTGAGAIGLPDDGVLGLAVGHMLDDNFYIIAGAADAKGRSDKPSD
HECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHEECCCEEEEEECCCCCCCCCCCCC
GFETLFNDHKLFTTFELGWTASQEHIYTDNVHVTLWHMDGGTQHNLTQPSESGQGINFSA
HHHHHHCCCEEEEEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEEE
SFFVTPQLMPFVRGGISQGDVALYDNSLTMGLGYFGLGGEKNNLGFAINFSEVNENLGKA
EEEECCCHHHHHHCCCCCCCEEEEECCEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHH
YGVTDDKQFTSEVYYNMSLGEFVQLTPNIQYIDNPAISTEDDTWVIGLRARVSF
CCCCCCHHHHHHEEEECCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA