Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is ycbL [C]

Identifier: 157961944

GI number: 157961944

Start: 2568927

End: 2570036

Strand: Direct

Name: ycbL [C]

Synonym: Spea_2123

Alternate gene names: 157961944

Gene position: 2568927-2570036 (Clockwise)

Preceding gene: 157961941

Following gene: 157961945

Centisome position: 49.65

GC content: 41.08

Gene sequence:

>1110_bases
ATGGACGAATCGAACAAGCAATTGCCTAATGATTATCAAACGCAAAAATTAAAAGATCGCCAAGCGTTAAATTACCCATT
CGAACCACCATTGTGTGATGCAAATGTTGTCTATGTGGCAAAAGGCGTGCTTTGGGCGCGACTCTCTATGCCGATGGGCC
TAGATCATATCAATGTTTATATTTTGGAAGATTTCGATGGCTGGTATCTAATTGATACCGGTTTAAATACTGAAGGTAAT
AAAGCTCTGTGGCTTTCGCTTGCAGCAAATTACCTGAGCGCAAAACCGGTTAAAGGCGTTATCTGTACCCATTTTCATTA
TGACCACTCTGGCCTAACTAGCTGGTTAACCGAATATTTTAATGTGCCTTTGTATATGACTCACGGTGAGTACTATATGT
TGAGAGGGGTAGCTGCAACTCATAATGCTACCGGGAGTAAACAGGATAAGCTGTTTTATACTCACGCAGGCTTGTCTGCT
GAGTATGCCGCAAAGATTTTTGAAGCTTGTAAGAAAGATCCTTATATCACGCATTACCCGCCACGTTTTTCCCGCCTAAG
AGAGGGGGATACTTTCAGAATAGGACATCGAGAGTGGCAGATTTGGATTGGGGAAGGTCATAGCCCAGAGCATGCTTGTT
TATATAGTGAAGCCATAGACGAAGAACCTGCACTTTTAATTGCAGGTGACCAAGTTCTTCCCGAAATTAGTTCAAATATT
TTGGTTAGTAGCATTGAACCTGAAGCGAACCCGTTAGCTAACTGGTTTAGATCGTTAAAGCGACTCAAAGCATTAGATAG
TGAAACTATGGTACTGCCAGCACATGGTCCCGTTTTTGTAAACTTGCATACTAGAGCTGAACAACTGGAACAGCATCACA
TAAACCAACTGGATACACTGCGTCAGTTAAGCATGAGTCAGGCAAGCTTTAGTGCCTTGGAAGCTGTAGAGGCGTTATTT
AAACGCCCTTTACAACCAATAGAGAAGCTGATGGCTCTTGGCGAAACACTGGCCCATTTAAATTGGTTAATAAACGTAGA
AGAGTTAACAAAGACCCTTTGTAATAAAAGTAATAAATATTTATATAACAATAAGCTAAGAATAGCTTAG

Upstream 100 bases:

>100_bases
GTTGCTATCTCGTGGAATAGATTCTTATATTTGTGTTCTTAGTACTCAGGTTTTATGGTCAGAAGAAAAATACAACTTTG
AACTAAAGCGGGAGGGATGA

Downstream 100 bases:

>100_bases
GGATTATAGTTAACAAGAAATAGATAACAGGAGAAAGTGATGGATATCATTGATCAAGCACAAAAAGTTAAAGCGCAACT
GACAGCAGCAGGGGCGCCAT

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Beta Lactamase; Beta-Lactamase Class B; Zinc Metallohydrolase Glyoxalase II Family; Zn-Dependent Hydrolase Glyoxylase; Metallo-Dependent Enzymatic Protein; Metallo-Beta-Lactamase Family Hydrolase; Hydrolase; AMP-Dependent Synthetase And Ligase; Zinc Metallohydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDESNKQLPNDYQTQKLKDRQALNYPFEPPLCDANVVYVAKGVLWARLSMPMGLDHINVYILEDFDGWYLIDTGLNTEGN
KALWLSLAANYLSAKPVKGVICTHFHYDHSGLTSWLTEYFNVPLYMTHGEYYMLRGVAATHNATGSKQDKLFYTHAGLSA
EYAAKIFEACKKDPYITHYPPRFSRLREGDTFRIGHREWQIWIGEGHSPEHACLYSEAIDEEPALLIAGDQVLPEISSNI
LVSSIEPEANPLANWFRSLKRLKALDSETMVLPAHGPVFVNLHTRAEQLEQHHINQLDTLRQLSMSQASFSALEAVEALF
KRPLQPIEKLMALGETLAHLNWLINVEELTKTLCNKSNKYLYNNKLRIA

Sequences:

>Translated_369_residues
MDESNKQLPNDYQTQKLKDRQALNYPFEPPLCDANVVYVAKGVLWARLSMPMGLDHINVYILEDFDGWYLIDTGLNTEGN
KALWLSLAANYLSAKPVKGVICTHFHYDHSGLTSWLTEYFNVPLYMTHGEYYMLRGVAATHNATGSKQDKLFYTHAGLSA
EYAAKIFEACKKDPYITHYPPRFSRLREGDTFRIGHREWQIWIGEGHSPEHACLYSEAIDEEPALLIAGDQVLPEISSNI
LVSSIEPEANPLANWFRSLKRLKALDSETMVLPAHGPVFVNLHTRAEQLEQHHINQLDTLRQLSMSQASFSALEAVEALF
KRPLQPIEKLMALGETLAHLNWLINVEELTKTLCNKSNKYLYNNKLRIA
>Mature_369_residues
MDESNKQLPNDYQTQKLKDRQALNYPFEPPLCDANVVYVAKGVLWARLSMPMGLDHINVYILEDFDGWYLIDTGLNTEGN
KALWLSLAANYLSAKPVKGVICTHFHYDHSGLTSWLTEYFNVPLYMTHGEYYMLRGVAATHNATGSKQDKLFYTHAGLSA
EYAAKIFEACKKDPYITHYPPRFSRLREGDTFRIGHREWQIWIGEGHSPEHACLYSEAIDEEPALLIAGDQVLPEISSNI
LVSSIEPEANPLANWFRSLKRLKALDSETMVLPAHGPVFVNLHTRAEQLEQHHINQLDTLRQLSMSQASFSALEAVEALF
KRPLQPIEKLMALGETLAHLNWLINVEELTKTLCNKSNKYLYNNKLRIA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42047; Mature: 42047

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDESNKQLPNDYQTQKLKDRQALNYPFEPPLCDANVVYVAKGVLWARLSMPMGLDHINVY
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCEEEEE
ILEDFDGWYLIDTGLNTEGNKALWLSLAANYLSAKPVKGVICTHFHYDHSGLTSWLTEYF
EEEECCCEEEEECCCCCCCCCEEEEEEHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH
NVPLYMTHGEYYMLRGVAATHNATGSKQDKLFYTHAGLSAEYAAKIFEACKKDPYITHYP
CCCEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
PRFSRLREGDTFRIGHREWQIWIGEGHSPEHACLYSEAIDEEPALLIAGDQVLPEISSNI
CHHHHHCCCCEEEECCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCE
LVSSIEPEANPLANWFRSLKRLKALDSETMVLPAHGPVFVNLHTRAEQLEQHHINQLDTL
EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
RQLSMSQASFSALEAVEALFKRPLQPIEKLMALGETLAHLNWLINVEELTKTLCNKSNKY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCE
LYNNKLRIA
EECCEEEEC
>Mature Secondary Structure
MDESNKQLPNDYQTQKLKDRQALNYPFEPPLCDANVVYVAKGVLWARLSMPMGLDHINVY
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCEEEEE
ILEDFDGWYLIDTGLNTEGNKALWLSLAANYLSAKPVKGVICTHFHYDHSGLTSWLTEYF
EEEECCCEEEEECCCCCCCCCEEEEEEHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH
NVPLYMTHGEYYMLRGVAATHNATGSKQDKLFYTHAGLSAEYAAKIFEACKKDPYITHYP
CCCEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
PRFSRLREGDTFRIGHREWQIWIGEGHSPEHACLYSEAIDEEPALLIAGDQVLPEISSNI
CHHHHHCCCCEEEECCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCE
LVSSIEPEANPLANWFRSLKRLKALDSETMVLPAHGPVFVNLHTRAEQLEQHHINQLDTL
EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHH
RQLSMSQASFSALEAVEALFKRPLQPIEKLMALGETLAHLNWLINVEELTKTLCNKSNKY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCE
LYNNKLRIA
EECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA