| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is calB [H]
Identifier: 157961941
GI number: 157961941
Start: 2564669
End: 2566093
Strand: Direct
Name: calB [H]
Synonym: Spea_2120
Alternate gene names: 157961941
Gene position: 2564669-2566093 (Clockwise)
Preceding gene: 157961934
Following gene: 157961944
Centisome position: 49.56
GC content: 44.84
Gene sequence:
>1425_bases ATGACAACACCCATAAATAGCCTCACTCAATTATTAACGCAGCAAAAGCAAGCGCATCTCGCTAGCCCAAACCCATCGGC AAGTGAACGTAAAAAAAGAATTCAACAAGTTATCGATGTATTAGTGGCTAATCACAGCGCTTTGGTAACCGCAATGGAAG CAGATTTTGGCGGACGTAGCCAAGGTTTCTCGCTAATGAATGACGTATTGGGTTCATTAGGTTCACTCAAGCATACTAGG GACAATTTAGACGATTGGATGGCTGCAGAAACTCGCCAGCCTTTTACGCCTTACGATCAGTTAGGCGCCAAGGCTGAAGT GAGCTTTCAAGCAAAAGGTTGTGTTGGAATTATAGGCACCTGGAATGCACCTTTATATACCTTATTAAGCCCACTCGCGT GTGCTCTAGGCGCGGGAAACAGAGCTATCTTGAAACCATCAGAGTTAACTCCCCGCACAGCTCAAACTATTGCTGAGTTG TTTGAAAAATTTATTAGCCCTGAAGTCGTGACTGTAGTGACAGGGGCTGCGCAAATCGGCGCTGCATTCGCGGCACTACC TTTTGATCATCTAGTATTTACCGGCAGTAGTGCAATTGGTCGAAAAGTGATGGCCGCTGCGGCAGAGAATTTGACTCCCG TAACGCTCGAGTTAGGCGGGAAGTCACCGGCGATCATTAGTGCTAGTGCTAACCTTGATCAGGCTTGCTACCGTTTAGCA ATTGCAAAGGGCACTAACGGTGGGCAAATCTGTGTCAGCCCAGACATTATTTATCTACATCAAGAAAATCTCGAACAAGG AATATCTACGTTAAAGCAAGTATTCTCGAGCTTATATCCTTCAATAAGCGGTAATCAAGATCTCGTGCCTATAGTCAATC AAGCTCACTTTGAGCGAGTAGAAAGCTATATTAATGATGCAAAAGATAAAGGCGTAAGAGTTGAGTCGAGTCATCAAACC TCAGCCGACGCTATGACTCGTCGAGCGCCACTACGAATCGTTGTTAACCCTCACAATAGCTGTGACATTATGCAGCATGA GATTTTTGGTCTAGCAGTGGTGATTAAAACCTATTCAGAGATAGATGAAGTCATAAGTGATATCAATAGTCGTGATAATC CTTTAGCGCTGTATTATTTTGGTGAAAACTCAACAGAGCAGGCAAAGGTGCTTGGTTTGACTCGTTCTGGTGGGGTAACA ATCAATGATGCTTTGATGCACGCCGCTATGCATGACGCGCCTTTTGGTGGTACAGGTGCTTCAGGAATGGGCCATTATCA TGGTAAAGAAGGATTTTTACAGTTTAGCCATATGAAGACAGTTCTGACTATGCCTGATTATGACCCTCGCGCAGAGTGGG GCATGTTACCGCCATACCATGAAGGTTTTAAGGCGGTAATGGAGTCGCAAGTTACAGCAGATTAA
Upstream 100 bases:
>100_bases CGAACCGTTACCGGCATCGTCCGTACAGACCATGAATTAGGCGGGCTAGACAGCTAAAAAGGTGCAAACAACCGTATTAA TAAAAGAGGGAACTCCCATA
Downstream 100 bases:
>100_bases CGAAATGGATTAATTGTTAGCAATAATGAAAAATGGCAGCCACAGGCTGCCATTTTTATGTTTTTATTAATAACAATCTA AGGGATTGTATAAGGTTCAG
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: CALDH [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MTTPINSLTQLLTQQKQAHLASPNPSASERKKRIQQVIDVLVANHSALVTAMEADFGGRSQGFSLMNDVLGSLGSLKHTR DNLDDWMAAETRQPFTPYDQLGAKAEVSFQAKGCVGIIGTWNAPLYTLLSPLACALGAGNRAILKPSELTPRTAQTIAEL FEKFISPEVVTVVTGAAQIGAAFAALPFDHLVFTGSSAIGRKVMAAAAENLTPVTLELGGKSPAIISASANLDQACYRLA IAKGTNGGQICVSPDIIYLHQENLEQGISTLKQVFSSLYPSISGNQDLVPIVNQAHFERVESYINDAKDKGVRVESSHQT SADAMTRRAPLRIVVNPHNSCDIMQHEIFGLAVVIKTYSEIDEVISDINSRDNPLALYYFGENSTEQAKVLGLTRSGGVT INDALMHAAMHDAPFGGTGASGMGHYHGKEGFLQFSHMKTVLTMPDYDPRAEWGMLPPYHEGFKAVMESQVTAD
Sequences:
>Translated_474_residues MTTPINSLTQLLTQQKQAHLASPNPSASERKKRIQQVIDVLVANHSALVTAMEADFGGRSQGFSLMNDVLGSLGSLKHTR DNLDDWMAAETRQPFTPYDQLGAKAEVSFQAKGCVGIIGTWNAPLYTLLSPLACALGAGNRAILKPSELTPRTAQTIAEL FEKFISPEVVTVVTGAAQIGAAFAALPFDHLVFTGSSAIGRKVMAAAAENLTPVTLELGGKSPAIISASANLDQACYRLA IAKGTNGGQICVSPDIIYLHQENLEQGISTLKQVFSSLYPSISGNQDLVPIVNQAHFERVESYINDAKDKGVRVESSHQT SADAMTRRAPLRIVVNPHNSCDIMQHEIFGLAVVIKTYSEIDEVISDINSRDNPLALYYFGENSTEQAKVLGLTRSGGVT INDALMHAAMHDAPFGGTGASGMGHYHGKEGFLQFSHMKTVLTMPDYDPRAEWGMLPPYHEGFKAVMESQVTAD >Mature_473_residues TTPINSLTQLLTQQKQAHLASPNPSASERKKRIQQVIDVLVANHSALVTAMEADFGGRSQGFSLMNDVLGSLGSLKHTRD NLDDWMAAETRQPFTPYDQLGAKAEVSFQAKGCVGIIGTWNAPLYTLLSPLACALGAGNRAILKPSELTPRTAQTIAELF EKFISPEVVTVVTGAAQIGAAFAALPFDHLVFTGSSAIGRKVMAAAAENLTPVTLELGGKSPAIISASANLDQACYRLAI AKGTNGGQICVSPDIIYLHQENLEQGISTLKQVFSSLYPSISGNQDLVPIVNQAHFERVESYINDAKDKGVRVESSHQTS ADAMTRRAPLRIVVNPHNSCDIMQHEIFGLAVVIKTYSEIDEVISDINSRDNPLALYYFGENSTEQAKVLGLTRSGGVTI NDALMHAAMHDAPFGGTGASGMGHYHGKEGFLQFSHMKTVLTMPDYDPRAEWGMLPPYHEGFKAVMESQVTAD
Specific function: Acts Almost Equally Well On Phenylacetaldehyde, 4- Hydroxyphenylacetaldehyde And 3,4-Dihydroxyphenylacetaldehyde. [C]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4557303, Length=455, Percent_Identity=33.1868131868132, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI73466520, Length=455, Percent_Identity=33.1868131868132, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI206597441, Length=419, Percent_Identity=35.0835322195704, Blast_Score=251, Evalue=8e-67, Organism=Homo sapiens, GI206597439, Length=419, Percent_Identity=35.0835322195704, Blast_Score=251, Evalue=8e-67, Organism=Homo sapiens, GI22907049, Length=419, Percent_Identity=35.0835322195704, Blast_Score=251, Evalue=8e-67, Organism=Homo sapiens, GI4502043, Length=441, Percent_Identity=35.1473922902494, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI238814371, Length=441, Percent_Identity=35.1473922902494, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI71773324, Length=394, Percent_Identity=36.0406091370558, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI73695881, Length=353, Percent_Identity=34.5609065155807, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI73695879, Length=353, Percent_Identity=34.5609065155807, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI153266822, Length=432, Percent_Identity=29.6296296296296, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI12007648, Length=446, Percent_Identity=28.2511210762332, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI21361176, Length=425, Percent_Identity=28, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI115387104, Length=339, Percent_Identity=29.2035398230088, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI25777732, Length=338, Percent_Identity=31.6568047337278, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI25777724, Length=436, Percent_Identity=27.5229357798165, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI25777728, Length=436, Percent_Identity=27.5229357798165, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI25777730, Length=337, Percent_Identity=30.2670623145401, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI238814322, Length=429, Percent_Identity=27.7389277389277, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI25952152, Length=428, Percent_Identity=27.3364485981308, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4507229, Length=438, Percent_Identity=26.7123287671233, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI25777721, Length=451, Percent_Identity=25.9423503325942, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI21614513, Length=430, Percent_Identity=26.046511627907, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI25777726, Length=433, Percent_Identity=24.7113163972286, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI301500698, Length=275, Percent_Identity=26.9090909090909, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI87081896, Length=422, Percent_Identity=29.3838862559242, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789015, Length=366, Percent_Identity=30.6010928961749, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI1787684, Length=368, Percent_Identity=27.7173913043478, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI87082295, Length=356, Percent_Identity=28.9325842696629, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786504, Length=340, Percent_Identity=32.9411764705882, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1787558, Length=434, Percent_Identity=25.3456221198157, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1787715, Length=336, Percent_Identity=26.1904761904762, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787250, Length=343, Percent_Identity=28.2798833819242, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1788042, Length=329, Percent_Identity=26.1398176291793, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI25146391, Length=438, Percent_Identity=31.5068493150685, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17564084, Length=443, Percent_Identity=33.8600451467269, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI32566756, Length=438, Percent_Identity=31.5068493150685, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI25146394, Length=438, Percent_Identity=31.5068493150685, Blast_Score=238, Evalue=7e-63, Organism=Caenorhabditis elegans, GI17562198, Length=337, Percent_Identity=30.2670623145401, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17534119, Length=432, Percent_Identity=27.7777777777778, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI133930964, Length=342, Percent_Identity=29.8245614035088, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25144435, Length=337, Percent_Identity=30.5637982195846, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI32564736, Length=337, Percent_Identity=30.5637982195846, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17551164, Length=339, Percent_Identity=29.2035398230088, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI25143874, Length=338, Percent_Identity=28.698224852071, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI25143876, Length=338, Percent_Identity=28.698224852071, Blast_Score=115, Evalue=7e-26, Organism=Caenorhabditis elegans, GI71995606, Length=335, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71995613, Length=285, Percent_Identity=29.8245614035088, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI115534176, Length=340, Percent_Identity=25.5882352941176, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71986308, Length=344, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323757, Length=453, Percent_Identity=31.5673289183223, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6320917, Length=334, Percent_Identity=29.6407185628743, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6321828, Length=443, Percent_Identity=25.5079006772009, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6323821, Length=342, Percent_Identity=28.6549707602339, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6323822, Length=342, Percent_Identity=29.2397660818713, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324950, Length=347, Percent_Identity=28.5302593659942, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6325196, Length=337, Percent_Identity=29.673590504451, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6319478, Length=458, Percent_Identity=24.4541484716157, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI281360299, Length=454, Percent_Identity=32.8193832599119, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI281360297, Length=454, Percent_Identity=32.8193832599119, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI281360295, Length=454, Percent_Identity=32.8193832599119, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI24586250, Length=454, Percent_Identity=32.8193832599119, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI281360301, Length=454, Percent_Identity=32.8193832599119, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI281360303, Length=454, Percent_Identity=31.9383259911894, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI45552499, Length=454, Percent_Identity=31.9383259911894, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI281362580, Length=366, Percent_Identity=28.6885245901639, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI62472918, Length=366, Percent_Identity=28.6885245901639, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI62472926, Length=366, Percent_Identity=28.6885245901639, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI62472936, Length=366, Percent_Identity=28.6885245901639, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI21356737, Length=366, Percent_Identity=28.6885245901639, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI281360293, Length=256, Percent_Identity=32.421875, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI20129399, Length=337, Percent_Identity=29.9703264094956, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24650465, Length=410, Percent_Identity=28.780487804878, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24585660, Length=343, Percent_Identity=27.4052478134111, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI24666674, Length=345, Percent_Identity=27.8260869565217, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016160 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012394 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.68 [H]
Molecular weight: Translated: 51027; Mature: 50896
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPINSLTQLLTQQKQAHLASPNPSASERKKRIQQVIDVLVANHSALVTAMEADFGGRS CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC QGFSLMNDVLGSLGSLKHTRDNLDDWMAAETRQPFTPYDQLGAKAEVSFQAKGCVGIIGT CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCCEEEEEC WNAPLYTLLSPLACALGAGNRAILKPSELTPRTAQTIAELFEKFISPEVVTVVTGAAQIG CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHH AAFAALPFDHLVFTGSSAIGRKVMAAAAENLTPVTLELGGKSPAIISASANLDQACYRLA HHHHHCCHHHHEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHH IAKGTNGGQICVSPDIIYLHQENLEQGISTLKQVFSSLYPSISGNQDLVPIVNQAHFERV HEECCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ESYINDAKDKGVRVESSHQTSADAMTRRAPLRIVVNPHNSCDIMQHEIFGLAVVIKTYSE HHHHHHHHHCCEEEECCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH IDEVISDINSRDNPLALYYFGENSTEQAKVLGLTRSGGVTINDALMHAAMHDAPFGGTGA HHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCC SGMGHYHGKEGFLQFSHMKTVLTMPDYDPRAEWGMLPPYHEGFKAVMESQVTAD CCCCCCCCCCCCEEHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TTPINSLTQLLTQQKQAHLASPNPSASERKKRIQQVIDVLVANHSALVTAMEADFGGRS CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC QGFSLMNDVLGSLGSLKHTRDNLDDWMAAETRQPFTPYDQLGAKAEVSFQAKGCVGIIGT CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCCEEEEEC WNAPLYTLLSPLACALGAGNRAILKPSELTPRTAQTIAELFEKFISPEVVTVVTGAAQIG CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHH AAFAALPFDHLVFTGSSAIGRKVMAAAAENLTPVTLELGGKSPAIISASANLDQACYRLA HHHHHCCHHHHEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHH IAKGTNGGQICVSPDIIYLHQENLEQGISTLKQVFSSLYPSISGNQDLVPIVNQAHFERV HEECCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH ESYINDAKDKGVRVESSHQTSADAMTRRAPLRIVVNPHNSCDIMQHEIFGLAVVIKTYSE HHHHHHHHHCCEEEECCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH IDEVISDINSRDNPLALYYFGENSTEQAKVLGLTRSGGVTINDALMHAAMHDAPFGGTGA HHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCC SGMGHYHGKEGFLQFSHMKTVLTMPDYDPRAEWGMLPPYHEGFKAVMESQVTAD CCCCCCCCCCCCEEHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]