Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 157961860

GI number: 157961860

Start: 2467255

End: 2469306

Strand: Direct

Name: yuxL [H]

Synonym: Spea_2039

Alternate gene names: 157961860

Gene position: 2467255-2469306 (Clockwise)

Preceding gene: 157961859

Following gene: 157961863

Centisome position: 47.68

GC content: 45.61

Gene sequence:

>2052_bases
ATGAAAAAAACTGCAATCATAATAGCGCTTGCATCTGCAGGGGCCGTATTTAGCGCTCAGGCCACGTCAACATCACCTTT
CACTGTGCAAGACCTCGTTAAAATGAATAAGCTTCATTCGGCAGCATTGTCAAATGATGGCACAAAAATTGTTTATGCGG
TGAAAAATATTGATGCAGAAGGTGAGGCGAGTACTGATCTTTACATTCAAGACCTGACTTCAAGCTCTTCAAAAGCAAAA
CAGATCACCAGTGCCGCTGGTACTGAGCATAGCGTCGCTTTTGCTCCTAATGACAAGAGTATCTATTTCCTTGCTGCGCG
TAATGGCTCAAGCCAAGTGTACGAGCTTGCACTCGACGGCGGTGAAGCGATTCAGGTAACCGATTTTCCGTTAAATGTAG
AAGGCTATAAGCTATCGCAAGATGGCAAGCAAGTCGTAGTCAACATGCGTGTCTTCCCAGACTGTAAAGATCTAGCTTGC
TCAAAAGATAAATTCACAGCTGAAGCCGAGCGTGATACTACGGGTCGCGAATATAAGCAGCTAATGGTGCGTCACTGGGA
CACTTGGAGTGACCACTCAAGAAGCCATCTGTTTGTTGCCCAATTAAACGGCGAAAAAGTGACTTCAGCTATTGATGTTA
CTGCCGGATTAGATACCGAAACACCGCCAAAGCCATTCTCTGGCATGGAAGAAGTGACCTTCACGCCAGATGGTAAGCAT
GTAGTTTATACGGCTAAAGCACCGGGTAAAGATCAGGCTTGGATCACTAATTACGATTTATGGAAAGTGAGTGTGGCTGG
TGGCGAGGCTGAAAACTTAACCGAGTCGAATAAGGCTTGGGATGCACACCCAACGTATTCAGCCGATGGCCGTTATCTGG
CCTATTTCGCCATGACAAAACCTGGCTTTGAAGCCGATCGCTACCGCATTATTTTGCGTGATACCGTAACGGGCCAAGAG
AAAGAAGTGGCGCCGCTATGGGATCGCAGCCCAAGCTCTCTAGCTTTTGGTAAAGACAACAAAACATTATATGTGACTGC
ACAAGATGTTGGTCAGGTATCAATCTTTGAAGTGAATACCCAGTTTGGTGATGTTAAGACCATCTATAACGAAGGTAGCA
ACAGCATCGTTGGTGTGAATAATGACAAGATTATCTTTAGTCATAAATCGCTAGTTGAGCCAGGCGATCTTTATACCATC
AACCTAGACGGTCAAAACCTTAATCGTGTGACTGAAGTTAACAAAGACAAGTTAGCTAAAGTTAACTTTGGTGAATACCA
GCAATTTAGCTTTAAGGGCTGGAATAACGAAGAAGTATATGGCTATTGGATTAAGCCTTCAAACTACAAGGCTGGTGAGA
AGTACCCCATTGCTTTCTTAGTGCACGGTGGCCCACAAGGATCATTTGGTAACTCATTTAGCAGCCGCTGGAACCCTCAG
TTATGGGCTGGAGCGGGTTATGGTGTGGTGATGATCGATTTCCATGGCTCAACTGGTTATGGCCAAGCGTTTACTGATTC
AATCACTCAAGATTGGGGCGGCAAGCCACTTGAAGATCTGCAAAAAGGTTTAGCGGCGGTGACTAAGCAGCAGAAGTGGT
TAGACGGTGATAATGCTTGTGCACTTGGAGGTTCATACGGTGGATACATGATGAACTGGATCCAGGGTAACTGGAATGAC
GGTTTCAAGTGCCTAGTGAATCACGCTGGTCTATTTGATATGCGCTCTATGTACTATGTAACTGAAGAGCTTTGGTTCCC
AGAGTTTGAGTTTGGCGGTACCTACGAGAAGAACAAAGAGCTATACGAGAAGTTTAACCCAGTGAATTATGTAGAGAACT
GGAAGACTCCTATGCTAGTTATCCATGGCGAGAAAGACTTCCGTGTTCCATACGGTCAAGGCCTCGCGGCATTCACCTAC
ATGCAGCGCAATGGGATCCCATCAGAGTTACTCATCTATCCAGATGAAAACCACTGGATCTTAACCCCTGAAAACCTAGA
GCAGTGGTACGCCAACGTACTAGGCTGGATGGATCGCTGGACAGAGAAGTAA

Upstream 100 bases:

>100_bases
AACATAAAGTACAAGTAGTTGAGCAGACTAGTATCAATCACAAATTGATCGCACCACACGTTTAACTAATCCCTTTAACT
ATAAGAATAAGATTATAACG

Downstream 100 bases:

>100_bases
GTTTAACTGTTAGTGATGTTAGCGGCATAAATTGAAAGCCAGAACTTAAGTTCTGGCTTTTTTTTGCGAAAATCAGCTTG
TGCTAGCGACTTTTATTGCG

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAK
QITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLAC
SKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH
VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQE
KEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTI
NLDGQNLNRVTEVNKDKLAKVNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ
LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNACALGGSYGGYMMNWIQGNWND
GFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKELYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTY
MQRNGIPSELLIYPDENHWILTPENLEQWYANVLGWMDRWTEK

Sequences:

>Translated_683_residues
MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAK
QITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLAC
SKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH
VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQE
KEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTI
NLDGQNLNRVTEVNKDKLAKVNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ
LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNACALGGSYGGYMMNWIQGNWND
GFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKELYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTY
MQRNGIPSELLIYPDENHWILTPENLEQWYANVLGWMDRWTEK
>Mature_683_residues
MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAK
QITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLAC
SKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH
VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQE
KEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTI
NLDGQNLNRVTEVNKDKLAKVNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ
LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNACALGGSYGGYMMNWIQGNWND
GFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKELYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTY
MQRNGIPSELLIYPDENHWILTPENLEQWYANVLGWMDRWTEK

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=363, Percent_Identity=23.4159779614325, Blast_Score=112, Evalue=2e-24,
Organism=Homo sapiens, GI18450280, Length=255, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI37577089, Length=255, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=3e-17,
Organism=Homo sapiens, GI194394146, Length=258, Percent_Identity=27.5193798449612, Blast_Score=83, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI25149159, Length=369, Percent_Identity=24.1192411924119, Blast_Score=105, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17552908, Length=267, Percent_Identity=23.5955056179775, Blast_Score=90, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25144537, Length=484, Percent_Identity=21.6942148760331, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25144540, Length=395, Percent_Identity=22.7848101265823, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45551969, Length=259, Percent_Identity=26.2548262548263, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45550825, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45553511, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 76300; Mature: 76300

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAE
CCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
GEASTDLYIQDLTSSSSKAKQITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDG
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECC
GEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLACSKDKFTAEAERDTTGREYKQ
CCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHH
LMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH
HHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCE
VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTK
EEEECCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PGFEADRYRIILRDTVTGQEKEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNT
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEEEC
QFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTINLDGQNLNRVTEVNKDKLAK
CCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHCCHHHEEE
VNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ
ECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNAC
EEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEE
ALGGSYGGYMMNWIQGNWNDGFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKE
EECCCCCCEEEEEEECCCCCCHHEEECCCCCHHHHHHHEEHHHHCCCCCCCCCCCCCCHH
LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTYMQRNGIPSELLIYPDENHWI
HHHHCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCEE
LTPENLEQWYANVLGWMDRWTEK
ECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTAIIIALASAGAVFSAQATSTSPFTVQDLVKMNKLHSAALSNDGTKIVYAVKNIDAE
CCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
GEASTDLYIQDLTSSSSKAKQITSAAGTEHSVAFAPNDKSIYFLAARNGSSQVYELALDG
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECC
GEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLACSKDKFTAEAERDTTGREYKQ
CCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHH
LMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLDTETPPKPFSGMEEVTFTPDGKH
HHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCE
VVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTK
EEEECCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PGFEADRYRIILRDTVTGQEKEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNT
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEEEC
QFGDVKTIYNEGSNSIVGVNNDKIIFSHKSLVEPGDLYTINLDGQNLNRVTEVNKDKLAK
CCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHCCHHHEEE
VNFGEYQQFSFKGWNNEEVYGYWIKPSNYKAGEKYPIAFLVHGGPQGSFGNSFSSRWNPQ
ECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
LWAGAGYGVVMIDFHGSTGYGQAFTDSITQDWGGKPLEDLQKGLAAVTKQQKWLDGDNAC
EEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEE
ALGGSYGGYMMNWIQGNWNDGFKCLVNHAGLFDMRSMYYVTEELWFPEFEFGGTYEKNKE
EECCCCCCEEEEEEECCCCCCHHEEECCCCCHHHHHHHEEHHHHCCCCCCCCCCCCCCHH
LYEKFNPVNYVENWKTPMLVIHGEKDFRVPYGQGLAAFTYMQRNGIPSELLIYPDENHWI
HHHHCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCEE
LTPENLEQWYANVLGWMDRWTEK
ECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]