Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961420

Identifier: 157961420

GI number: 157961420

Start: 1932743

End: 1933150

Strand: Direct

Name: 157961420

Synonym: Spea_1594

Alternate gene names: NA

Gene position: 1932743-1933150 (Clockwise)

Preceding gene: 157961419

Following gene: 157961421

Centisome position: 37.35

GC content: 44.61

Gene sequence:

>408_bases
ATGAAGAACGAAAAGCTAGTCAGAAATCATGATGTCATGAGTCAAGATTATGCCATGATCGATGGGTTGCAAACCGTGGC
TGAAGCGATTGAACACGCGGTGAAAAACAAGGTTAACGTGTTATTCGTGAACAAGCGCCATGATGATGACGAGTATGGCA
TGGTACTAATGAGTGACATTGCCAAAAAAGTATTGGCACAAGACAGATCGCCTGAGCGAGTCAATGTCTATGAGATCATG
GTTAAGCCCGTGCTATGTGTGCCAGGGAGTATGGATGTACGATACAGTGCGCGCTTATTTGATAGGTTCGGTATTACAAA
GGCGCCAGTGGTTGAAGAGGGGAGAATTGCAGGACTGGTGAGTTATCACGAAATCGTGCTCAAAGGCATGATTAATAAGA
CAAGCTAA

Upstream 100 bases:

>100_bases
GTGACTCGGGCAAAGGCATCGCCATTCAAATTGATGTGGAGGACGCCGTCGGAGTCGCTCATCAGGTACAAAAGCTAAGC
CATGATATTGAGGATCAAAT

Downstream 100 bases:

>100_bases
GCTCACTATCGTCGAGTATAACCGAGCAGGCTATCCACTCGGTTTACCGGCTTTAGCTTTTTAGGCCCGATCTGAAAGTG
CTTGAGGCGCTCGCATATAG

Product: signal-transduction protein

Products: NA

Alternate protein names: Signal-Transduction Protein; CBS Domain Containing Protein; CBS Domain Protein; CP12 Polypeptide; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; CP12 Domain Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDIAKKVLAQDRSPERVNVYEIM
VKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLVSYHEIVLKGMINKTS

Sequences:

>Translated_135_residues
MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDIAKKVLAQDRSPERVNVYEIM
VKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLVSYHEIVLKGMINKTS
>Mature_135_residues
MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDIAKKVLAQDRSPERVNVYEIM
VKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLVSYHEIVLKGMINKTS

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15280; Mature: 15280

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH
AKKVLAQDRSPERVNVYEIMVKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLV
HHHHHHCCCCCCCCHHHHHEECHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
SYHEIVLKGMINKTS
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNEKLVRNHDVMSQDYAMIDGLQTVAEAIEHAVKNKVNVLFVNKRHDDDEYGMVLMSDI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH
AKKVLAQDRSPERVNVYEIMVKPVLCVPGSMDVRYSARLFDRFGITKAPVVEEGRIAGLV
HHHHHHCCCCCCCCHHHHHEECHHEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
SYHEIVLKGMINKTS
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA